The development of aquaculture on the northern coast of Manila Bay (Philippines): an analysis of long-term land-use changes and their causes

This study documents the event chronology and causes of land-use change in a deltaic region of the Philippines since the beginnings of aquaculture in the late nineteenth century. Satellite images and topographic maps spanning the period 1972–2013 were processed to map fishponds and the natural habitats over which they have encroached. Historical archives were consulted and interviews were conducted to understand the historical exploitation of local natural resources and the reasons behind the recorded land changes. Results showed that aquaculture developed in the late nineteenth century and expanded subsequently across the landscape under a succession of forcing factors. The global market, for example, played an early role but a number of land-use changes were also a direct response to changing environmental constraints and natural hazards. These cumulative events have promoted continuous gain in favor of aquaculture, to the detriment of other land-use options.     

The smell of desperadoes? Beavers distinguish between dominant and subordinate intruders

Olfactory signals can contain information, such as age and social status, and play a vital role in competitor assessment. In many territorial species, subordinates must leave their natal colony to obtain their own territory and mate. These individuals could be aggressive opponents in agonistic encounters, as they will have little to lose (the desperado effect). In this study, we tested the hypothesis that dominance and age are coded in the anal gland secretion (AGS) of the monogamous and highly territorial Eurasian beaver (Castor fiber), and if this information is used by conspecifics to evaluate the potential threat posed by an intruder. Territorial intrusions were simulated by presenting residents with a two-way choice test of AGS from an unknown male territory owner (i.e., dominant) and his son (i.e., subordinate; either 1 or ≥2 years old). Residents spent more time investigating AGS from subordinates than their fathers and responded more aggressively to subordinates than their fathers when subordinates were ≥2 years old. Chemical analyses gas chromatography and multivariate data analysis supported our behavioral findings and revealed differences between chemical profiles of territory owners and subordinates, as well as between the subordinates in different age classes. This study reveals that information about age and social status is coded in AGS of beavers and that this information is used to determine the level of an eventual future response to the signaler.     

Rapana venosa as an indicator species for TBT exposure over decadal and seasonal scales

Imposex and decline in reproductive output in marine gastropods have been linked to tributyltin (TBT) exposure. This study describes Chesapeake Bay, USA, veined rapa whelk Rapana venosa imposex incidence and sex ratios from 1998 to 2009. Tissue TBT concentrations (ng g^?1) were examined with respect to whelk sex, size, and water temperature at the time of collection, and also to egg case size, hatching success, and veliger diameter. Imposex incidence declined and population sex ratios moved closer to parity from 1998 to 2009. Observed TBT concentrations (ng g^?1) were higher in James River than in Ocean View whelks with higher TBT concentrations observed in males than in females. Exponential declines in TBT concentrations from female-specific first to last clutches within a reproductive season were observed, indicating that whelks depurate TBT through egg case deposition. Egg capsule hatching success and veliger size were similar for female and imposex whelks. The R. venosa imposex levels observed in Chesapeake Bay apparently do not affect the production, release, or viability of larvae.     

Acidity of machine-made snow and its effect on pH and aluminum speciation in New England streams during spring thaw

The pH of machine-made snow and its effect on an acid-sensitive watershed in Vermont were studied. Spring runoff from snowmaking was found to be less acidic and to contain less dissolved inorganic aluminum. Dissolved inorganic aluminum has been associated with damage to aquatic life. The extensive use of machine-made snow by the ski industry in most of the northeast region of the US may be beneficial to aquatic life.     

The political ecology of Yukon forestry: managing the forest as if people mattered

Over the past several decades a growing interest has emerged in the relationship between forest dependent communities and their use of non-timber forest resources (NTFR—i.e. berries, roots, barks). Motivated in large part by international concerns over the loss of biological and cultural diversity, efforts are now being made to conserve the world's remaining forests by repositioning NTFR to the forefront of the forest management process. Together with the Little Salmon Carmacks First Nation, we have undertaken an assessment that: 1) addresses the role of NTFR in fulfilling basic human necessities and well-being of community members, and 2) identifies the perceptual differences that exist among First Nation and non-First Nation community members regarding the security and future availability of forest resources. Based on our findings, we argue that if the true value of the forest is to be understood, and thus sustained, those involved in management must consider the full array of products and services the forest provides. Thus the conventional and over-simplified view that the forest is to provide primarily for commercial timber must be challenged in light of the multiplicity of values community members gain from forest use.     

Bayesian hierarchical mixture models for otolith microchemistry analysis

The field of fisheries research commonly uses classical statistical classification methods to estimate the proportion of fish that return to natal spawning grounds to spawn. With the advent of otolith microchemical analysis, researchers are able to extract information from fish ear stones (otoliths) about the chemical composition of water in which fish have spent distinct periods of their lives. Here we present a method of analysis set in the Bayesian statistical paradigm which enables explicit incorporation of habitat information into the analysis. The ecological system is seen as arising from a mixture of disparate fish populations and information from the biological relationships inherent in otolith formation is exploited through the hierarchical model structure. We present the model and motivation, demonstrate the validity of the model through simulation studies, and conclude with an analysis of a data set from Lake Erie.     

Detecting the effects of coal mining,acid rain,and natural gas extraction in Appalachian basin streams in Pennsylvania (USA) through analysis of barium and sulfate concentrations

To understand how extraction of different energy sources impacts water resources requires assessment of how water chemistry has changed in comparison with the background values of pristine streams. With such understanding, we can develop better water quality standards and ecological interpretations. However, determination of pristine background chemistry is difficult in areas with heavy human impact. To learn to do this, we compiled a master dataset of sulfate and barium concentrations ([SO₄], [Ba]) in Pennsylvania (PA, USA) streams from publically available sources. These elements were chosen because they can represent contamination related to oil/gas and coal, respectively. We applied changepoint analysis (i.e., likelihood ratio test) to identify pristine streams, which we defined as streams with a low variability in concentrations as measured over years. From these pristine streams, we estimated the baseline concentrations for major bedrock types in PA. Overall, we found that 48,471 data values are available for [SO₄] from 1904 to 2014 and 3243 data for [Ba] from 1963 to 2014. Statewide [SO₄] baseline was estimated to be 15.8 ± 9.6 mg/L, but values range from 12.4 to 26.7 mg/L for different bedrock types. The statewide [Ba] baseline is 27.7 ± 10.6 µg/L and values range from 25.8 to 38.7 µg/L. Results show that most increases in [SO₄] from the baseline occurred in areas with intensive coal mining activities, confirming previous studies. Sulfate inputs from acid rain were also documented. Slight increases in [Ba] since 2007 and higher [Ba] in areas with higher densities of gas wells when compared to other areas could document impacts from shale gas development, the prevalence of basin brines, or decreases in acid rain and its coupled effects on [Ba] related to barite solubility. The largest impacts on PA stream [Ba] and [SO₄] are related to releases from coal mining or burning rather than oil and gas development.

     

Mitochondrial DNA phylogeography of the harbour porpoise Phocoena phocoena in the North Pacific

Genetic structure and phylogeography of the harbour porpoise Phocoena phocoena in the North Pacific were examined using 358 bps sequences from the 5′ end of the mitochondrial DNA control region including those reported previously and newly obtained from the west Pacific. AMOVA and pairwise population φ _st estimates clearly revealed genetic differentiation between an east/south and a north/northwest group with the break along the Pacific Rim at British Columbia. In addition, nested clade phylogeographical analysis, neutrality tests, mismatch distribution analysis, genetic diversities and Mantel test, suggested that the observed genetic structure might have been influenced by contiguous range expansion with restricted gene flow in the direction from south to north along the North American coasts and east to west along the Pacific Rim in the middle to late Pleistocene.     

Female chacma baboons form strong, equitable, and enduring social bonds

Analyses of the pattern of associations, social interactions, coalitions, and aggression among chacma baboons (Papio hamadryas ursinus) in the Okavango Delta of Botswana over a 16-year period indicate that adult females form close, equitable, supportive, and enduring social relationships. They show strong and stable preferences for close kin, particularly their own mothers and daughters. Females also form strong attachments to unrelated females who are close to their own age and who are likely to be paternal half-sisters. Although absolute rates of aggression among kin are as high as rates of aggression among nonkin, females are more tolerant of close relatives than they are of others with whom they have comparable amounts of contact. These findings complement previous work which indicates that the strength of social bonds enhances the fitness of females in this population and support findings about the structure and function of social bonds in other primate groups.