The flame retardant tetrabromobisphenol-A and its metabolite found in river and marine sediments in Japan

Tetrabromobisphenol-A (TBBP), used as a flame retardant, was detected in river sediments collected in Osaka, Japan, at a concentration range from 22 to 140 μg/kg (ppb), as determined on a dry weight basis. TBBP was also found in marine sediments collected at Osaka Bay, though the TBBP levels of these samples were much lower than those from river sediments. Dimethyl ether derivative of TBBP (TBBP-DM), thought to be a decomposition product from microbial methylation, was found in the river sediments but in none of the marine sediments. TBBP-DM residues were about one-hundredth of the TBBP levels.     

Bacterial community structure analysis of sediment in the Sagami River, Japan using a rapid approach based on two-dimensional DNA gel electrophoresis mapping with selective primer pairs

A rapid approach based on two-dimensional DNA gel electrophroesis (2-DGE) mapping with selective primer pairs was employed to analyze bacterial community structure in sediments from upstream, midstream and downstream of Sagami River in Japan. The 2-DGE maps indicated that Alpha- and Delta-proteobacteria were major bacterial populations in the upstream and midstream sediments. Further bacterial community structure analysis showed that richness proportion of Alpha- and Delta-proteobacterial groups reflected a trend toward decreasing from the upstream to downstream sediments. The biomass proportion of bacterial populations in the midstream sediment showed a significantly difference from that in the other sediments, suggesting that there may be an environmental pressure on the midstream bacterial community. Lorenz curves, together with Gini coefficients were successfully applied to the 2-DGE mapping data for resolving evenness of bacterial populations, and showed that the plotted curve from high-resolution 2-DGE mapping became less linear and more an exponential function than that of the 1-DGE methods such as chain length analysis and denaturing gradient gel electrophoresis, suggesting that the 2-DGE mapping may achieve a more detailed evaluation of bacterial community. In conclusion, the 2-DGE mapping combined with the selective primer pairs enables bacterial community structure analysis in river sediment and thus it can also monitor sediment pollution based on the change of bacterial community structure.