Toward an ecological classification of soil bacteria

Although researchers have begun cataloging the incredible diversity of bacteria found in soil, we are largely unable to interpret this information in an ecological context, including which groups of bacteria are most abundant in different soils and why. With this study, we examined how the abundances of major soil bacterial phyla correspond to the biotic and abiotic characteristics of the soil environment to determine if they can be divided into ecologically meaningful categories. To do this, we collected 71 unique soil samples from a wide range of ecosystems across North America and looked for relationships between soil properties and the relative abundances of six dominant bacterial phyla (Acidobacteria, Bacteroidetes, Firmicutes, Actinobacteria, alpha-Proteobacteria, and the beta-Proteobacteria). Of the soil properties measured, net carbon (C) mineralization rate (an index of C availability) was the best predictor of phylum-level abundances. There was a negative correlation between Acidobacteria abundance and C mineralization rates (r2 = 0.26, P < 0.001), while the abundances of beta-Proteobacteria and Bacteroidetes were positively correlated with C mineralization rates (r2 = 0.35, P < 0.001 and r2 = 0.34, P < 0.001, respectively). These patterns were explored further using both experimental and meta-analytical approaches. We amended soil cores from a specific site with varying levels of sucrose over a 12-month period to maintain a gradient of elevated C availabilities. This experiment confirmed our survey results: there was a negative relationship between C amendment level and the abundance of Acidobacteria (r2 = 0.42, P < 0.01) and a positive relationship for both Bacteroidetes and beta-Proteobacteria (r2 = 0.38 and 0.70, respectively; P < 0.01 for each). Further support for a relationship between the relative abundances of these bacterial phyla and C availability was garnered from an analysis of published bacterial clone libraries from bulk and rhizosphere soils. Together our survey, experimental, and meta-analytical results suggest that certain bacterial phyla can be differentiated into copiotrophic and oligotrophic categories that correspond to the r- and K-selected categories used to describe the ecological attributes of plants and animals. By applying the copiotroph-oligotroph concept to soil microorganisms we can make specific predictions about the ecological attributes of various bacterial taxa and better understand the structure and function of soil bacterial communities.     

Understanding the Factors That Influence Headwater Stream Flows in Response to Storm Events1

Stanfield, Les W. and Don A. Jackson, 2011. Understanding the Factors That Influence Headwater Stream Flows in Response to Storm Events. Journal of the American Water Resources Association (JAWRA) 1‐22. DOI: 10.1111/j.1752‐1688.2010.00518.x Abstract: Headwater drainage features (first‐ to second‐order streams) are the capillaries of the landscape that, among other things, moderate the timing and volumes of water available to the riparian and aquatic ecosystems. How these features respond to summer rainfall is poorly understood. We studied how geology and an index of land use/land cover influenced peak flows following rainfall events in 110 headwater stream sites that were studied over a four‐month period during a drought year. Highest peak flows were observed in the most urbanized catchments and in poorly drained soils, but specific responses were variable depending on both geology and land disturbance. Redundancy analysis indicated that both surficial geology and land disturbance were important factors influencing peak flows under drought conditions. We conclude that responses of these headwater streams to individual storms during drought conditions are unpredictable from data collected using our methods, but increased peak flows were associated with increased urban and agricultural development, but mitigated by surficial geology. These findings demonstrate the challenges to accurately predict flow conditions in headwater streams during periods of extreme weather that concurrently have the greatest potential effect on biota. The combination of these challenges and importance of such events indicates the need to develop new approaches to study and manage these resources.     

Ambient concentrations of airborne endotoxin in two cities in the interior of British Columbia, Canada

This study measured and analyzed the outdoor airborne endotoxin concentration, on particulate matter (PM2·? and PM1?), for two cities in the interior of British Columbia, Canada. Samples were collected throughout one seasonal cycle, from October 2005 to September 2006. It was found that concentrations were generally highest in the summer and fall, and lowest in the winter and spring. Temperature and relative humidity were found to be most influential, with highest endotoxin concentrations recorded during warm periods and moderate relative humidity (35 to 75 percent). No clear association of concentration with wind direction was observed. Results were comparable between the two cities considered in this study, and concentrations were similar to or slightly higher than those reported by other studies considering urban locations. Endotoxin concentration was also found to be positively associated with agricultural dust sources identified by a source apportionment study conducted at one of the sampling locations.     

Forest Renewal British Columbia: An Experiment in the Recycling of Revenue-raising Environmental Taxation

Forest Renewal British Columbia (FRBC) was created in 1994 to deliver programmes of sustainable development within the leading economic sector of the province, serving as a key element of the radical new natural resource management agenda being promoted by an interventionist provincial administration. Its funding consisted solely of the hypothecated revenues of a 'super' stumpage on timber harvesting. This paper considers the role FRBC played in helping to gain agreement to changes in provincial land use planning and forest strategy, and evaluates its effectiveness as an eco-tax recycling mechanism.     

Spatial and temporal variation in growth rates and maturity in the Indo-Pacific squid <Emphasis Type="Italic">Sepioteuthis lessoniana</Emphasis> (Cephalopoda: Loliginidae)

Age, growth and maturity parameters are described for the Indo-Pacific squid Sepioteuthis lessoniana both temporally and spatially (equatorial, tropical and subtropical). Tropical squid that grew through periods of warming water temperatures grew 9% faster than squid that grew through periods of cool water temperatures. The tropical spring-hatched and equatorial squid had similar growth rates (3.24, 3.18 g/day) and these were significantly faster than the tropical summer/autumn hatched squid (2.89 g/day). The oldest squid aged was 224 days, but the majority of individuals were <200 days. Subtropical squid were larger, older and matured later than equatorial and tropical spring-hatched squid. The mean weight of subtropical squid aged between 100 and 150 days was >400 g, 85% greater than tropical and equatorial squid. Geographical differences revealed that subtropical mature winter females and males had mean ages >150 days, respectively 17% and 23% older than their tropical mature winter counterparts. Temporal differences in age at maturity were also evident with tropical winter females and males having a mean age of ~140 days, respectively 41% and 25% older than their summer counterparts. Cooler subtropical and winter tropical squid had the heaviest gonads (>15 g ovaries, >1.5 g testes) compared to summer tropical and equatorial squid. However, relative gonad investment (GSI) values of the cooler squid were significantly lower with cool subtropical and winter tropical females having GSI values <3, which was about half the value of the warmer water females. This study revealed considerable plasticity in the size-at-age of this species. The tropical population had growth parameters that fluctuated between an equatorial strategy (fast growth, small body size, and small gonads) and a subtropical strategy (large body size, slower growth, and large gonads) depending on season.     

Subhumid pasture plant communities entrained by management

Many annual cropping lands are being converted to perennial pasture in humid and subhumid areas of the USA as the economic, social, and environmental benefits of managed grazing become evident. Recent evidence about the positive effects of plant diversity on productivity is driving farmers towards management for more complex species mixes than were promoted historically for grazed pastures, but this emphasis has highlighted a lack of understanding about plant community management in pastures. To better understand this system we examined sources of variability in the plant community of a subhumid grassland that was subjected to combinations of disturbance (graze or burn), and amendment (nitrogen, carbon, or ambient), and native grass seeding treatments over 3 years (2004 to 2006). We estimated species cover five times during the study period and ordinated these data with nonmetric multidimensional scaling (NMS). The ordination explained 80% of the variation in the plant community data set. Variance in ordination site scores was ascribed to management (disturbance, soil amendment, and native grass seeding time), the environment (year, season within year, and block), or unexplained (residual) realms with a linear mixed-effects model. The overwhelming source of variability in the plant community (62–99%) was attributed to management. Ordination results illustrated that plant groups sorted out along management gradients: burned plots were shifted towards grasses while forbs and clovers were associated with grazed plots. We demonstrate how a community-level approach can be used to evaluate management regimes in agroecosystems. Our results indicate that disturbance and soil amendments can be used to shape plant communities in subhumid grasslands for specific agronomic and conservation goals.     

Social Dimensions of Urban Flood Experience,Exposure, and Concern

With growing urban populations and climate change, urban flooding is an important global issue, even in dryland regions. Flood risk assessments are usually used to identify vulnerable locations and populations, flooding experience patterns, or levels of concern about flooding, but rarely are all of these approaches combined. Furthermore, the social dynamics of flood concerns, exposure, and experience are underexplored. We combined geographic and survey data on household‐level measures of flood experience, concern, and exposure in Utah's urbanizing Wasatch Front. We asked: (1) Are socially vulnerable groups more likely to be exposed to flood risk? (2) How common are flooding experiences among urban residents, and how are these experiences related to sociodemographic characteristics and exposure? and (3) How concerned are urban residents about flooding, and does concern vary by exposure, flood experience, and sociodemographic characteristics? Although floodplain residents were more likely to be White and have higher incomes, respondents who were of a racial/ethnic minority, were older, had less education, and were living in floodplains were more likely to report flood experiences and concern about flooding. Flood risk management approaches need to address social as well as physical sources of vulnerability to floods and recognize social sources of variation in flood experiences and concern.     

Accounting for Cadmium: Tracking Emissions of Cadmium From the Global Economy

This paper examines the flow of cadmium through the global economy, with the aim of quantifying emissions of cadmium into the environment as a result of anthropogenic activities. First, a materials balance methodology is presented as the most appropriate means of assessing cadmium emissions from a wide range of anthropogenic sources. This is then applied to the best available data, from a variety of sources, to arrive at estimated flows of cadmium. Results are presented for 10 geo-political world regions and for a range of economic activities including non-ferrous metals production, iron and steel production, combustion of fossil fuels, fertilizer manufacture and use, cement production and the manufacture, use and disposal of cadmium containing products. Initially, this analysis partitions the total flow of cadmium into three major categories: atmospheric emissions, water-borne effluents and solid or bulked waste arisings. the paper then suggests a probable further partition of the initial emissions into different environmental media.     

Making a stand: five centuries of population growth in colonizing populations of Pinus ponderosa

The processes underlying the development of new populations are important for understanding how species colonize new territory and form viable long-term populations. Life-history-mediated processes such as Allee effects and dispersal capability may interact with climate variability and site-specific factors to govern population success and failure over extended time frames. We studied four disjunct populations of ponderosa pine in the Bighorn Basin of north-central Wyoming to examine population growth spanning more than five centuries. The study populations are separated from continuous ponderosa pine forest by distances ranging from 15 to >100 km. Strong evidence indicates that the initial colonizing individuals are still present, yielding a nearly complete record of population history. All trees in each population were aged using dendroecological techniques. The populations were all founded between 1530 and 1655 cal yr CE. All show logistic growth patterns, with initial exponential growth followed by a slowing during the mid to late 20th century. Initial population growth was slower than expectations from a logistic regression model at all four populations, but increased during the mid-18th century. Initial lags in population growth may have been due to strong Allee effects. A combination of overcoming Allee effects and a transition to favorable climate conditions may have facilitated a mid-18th century pulse in population growth rate.     

Diplomacy for science: strategies to promote international collaboration

Technology innovation is an increasingly globalized exercise with dramatic consequences for scientific and diplomatic goals alike, and requires enhanced participation and integration of scientists and science-minded diplomats within diplomatic missions to advance shared policy goals. This more general problem is addressed in the present article by focusing on recent collaborations between U.S. and German scientists, including several of the coauthors.