Genetic structure of leopard shark (<Emphasis Type="Italic">Triakis semifasciata</Emphasis>) populations in California waters

The leopard shark (Triakis semifasciata) is an important predator in coastal marine ecosystems of California, targeted by recreational and commercial fishermen and of specific interest in fisheries management. From October 2003 to August 2006, 169 leopard sharks were collected from the coast of California (between 40.750°N and 32.678°N) and analyzed for mitochondrial and nuclear genetic structure. Analyses of mtDNA control region sequences revealed relatively low levels of genetic variation (five haplotypes, average pairwise divergence π = 0.0067). In contrast, leopard sharks were highly polymorphic for inter simple sequence repeats (ISSRs), which characterize a broad range of the nuclear genome. The null hypothesis of panmixia in California waters was rejected for both genetic markers, and ISSRs displayed a statistically significant pattern of isolation by distance (IBD) across the species range (P = 0.002). A variety of analyses showed that divergence is most pronounced in the northernmost population of Humboldt Bay. Natal philopatry in T. semifasciata was tested using Siegel-Tukey tests on data partitioned by breeding site status, and sex-specific philopatry was tested by comparing IBD plots between sexes. Although there was some evidence for natal philopatry in leopard sharks (P = 0.038), and population divergence may be related to the proximity of breeding sites (P = 0.064), we found no support for sex-specific philopatry. In addition to identifying a novel set of highly variable genetic markers for use in shark population studies, these results may be used to better inform management decisions for leopard sharks in California.     

A Bayesian strategy for combining predictions from empirical and process-based models

We present a strategy for using an empirical forest growth model to reduce uncertainty in predictions made with a physiological process-based forest ecosystem model. The uncertainty reduction is carried out via Bayesian melding, in which information from prior knowledge and a deterministic computer model is conditioned on a likelihood function. We used predictions from an empirical forest growth model G-HAT in place of field observations of aboveground net primary productivity (ANPP) in a deciduous temperate forest ecosystem. Using Bayesian melding, priors for the inputs of the process-based forest ecosystem PnET-II were propagated through the model, and likelihoods for the PnET-II output ANPP were calculated using the G-HAT predictions. Posterior distributions for ANPP and many PnET-II inputs obtained using the G-HAT predictions largely matched posteriors obtained using field data. Since empirical growth models are often more readily available than extensive field data sets, the method represents a potential gain in efficiency for reducing the uncertainty of process-based model predictions when reliable empirical models are available but high-quality data are not.     

Does begging affect growth in nestling tree swallows,<Emphasis Type="Italic"> Tachycineta bicolor</Emphasis>?

Much of the theoretical work on the evolution of begging assumes this elaborate display is costly. The evidence for an energetic cost to begging has, however, been equivocal. Metabolic studies on nestling birds suggest that begging requires minimal energy, but some growth studies have shown that excess begging reduces growth rates. One difficulty in interpreting these results is that metabolic and growth studies have each been performed on different species. Here, we test whether high begging frequencies depress growth in nestling tree swallows, Tachycineta bicolor, a species in which the metabolic cost of begging has been measured. When we compared the growth of nestlings stimulated to beg at either high or low frequencies, we found no significant differences in their mass gained, wing growth or portion of ingested energy devoted to begging either during the experimental period or in the 24 h following the end of the experiment. We also found no significant relationship between begging intensity and growth measurements. The results of our study are consistent with previous metabolic studies on this species suggesting that the energetic cost of begging is relatively low. More generally, evidence for a fitness cost of begging via decreased growth is equivocal.Communicated by J. Dickinson     

A preliminary study of the phycological degradation of natural stone masonry

For many years it has been realised that the weathering of stone is not merely determined by physical and chemical factors but also by biological agents. When the stone in question is a historic building or monument, the damage done constitutes an irretrievable loss of our heritage and history. Laboratory studies have commenced in Paisley to study the effect of photoautotrophs on the major sedimentary rock forming minerals, with a view to expanding this work to study the overall effect of these micro-organisms on heritage masonry. Tests were carried out on Albite, Calcite, Dolomite, Orthoclase, Siderite and Quartz, using axenic cultures of the following: Chlorella vulgaris, Chlorococcum tetrasporum, Scenedesmus obliquus, Oocystis marsonii, Stichococcus bacillaris. The rock chips were immersed in either water or bolds basal media and exposed to a mix of the micro-organisms listed above and then tested weekly for their pH, fortnightly for the waters chemical composition using inductively coupled plasma-atomic emission spectrometry (ICP-AES) and visually utilising the universitys SEM facilities. Work so far has revealed biologically mediated etching of minerals, a well-defined pH profile over a period of 90 days, as well as a variety of elemental release patterns for the different minerals.     

Reproduction in short-beaked common dolphins (<Emphasis Type="Italic">Delphinus delphis</Emphasis>) from the western North Atlantic

A single population of short-beaked common dolphins (Delphinus delphis Linnaeus) occurs in the western North Atlantic from Florida to Newfoundland. Dolphins killed in a swordfish driftnet fishery between 1989 and 1998 provided samples for the present study. These were combined with additional observations from carcasses collected from stranding programs. Samples were examined from 74 female and 161 male short-beaked common dolphins. A highly significant male bias in the sex ratio of both the bycatch and stranding samples suggests that sex-based habitat partitioning or school segregation occurs in this population. Age was estimated from decalcified thin sections of teeth and testis and ovarian samples were examined both macro- and microscopically. Analyses showed that reproduction was both seasonal and synchronized. Females reached sexual maturation at approximately age eight; males matured at 9.5 years. Conception occurred during July and August (mean day 24 July). Gestation was estimated to last just under a year, so most females gave birth during July and August (mean day 15 July). Annual pregnancy rate was estimated to be between 25 and 33%. Males undergo a fivefold seasonal increase in testes mass and a twofold increase in seminiferous tubule diameter. Peak sperm production potential was observed in July. At the end of the breeding season testis size and activity decreased after August. Male dolphins in this population are hypothesized to engage in some form of sperm competition.     

Partitioning gas tracer tests for measurement of water in municipal solid waste

A key component in the operation of almost all bioreactor landfills is the addition of water to maintain optimal moisture conditions. To determine how much water is needed and where to add it, in situ methods are required to measure water within solid waste. Existing technologies often result in measurements of unknown accuracy, because of the variability of solid waste materials and time-dependent changes in packing density, both of which influence most measurement methods. To overcome these problems, a new technology recently developed by hydrologists for measuring water in the vadose zone--the partitioning gas tracer test--was tested. In this technology, the transport behavior of two gas tracers within solid waste is used to measure the fraction of the void space filled with water. One tracer is conservative and does not react with solids or liquids, while a second tracer partitions into the water and is separated from the conservative tracer during transport. This technology was tested in four different solid waste packings and was capable of determining the volumetric water content to within 48% of actual values, with most measurement errors less than 15%. This technology and the factors that affect its applicability to landfills are discussed in this paper.     

An empirical relationship between PM(2.5) and aerosol optical depth in Delhi Metropolitan

Atmospheric remote sensing offers a unique opportunity to compute indirect estimates of air quality, which are critically important for the management and surveillance of air quality in megacities of developing countries, particularly in India and China, which have experienced elevated concentration of air pollution but lack adequate spatial-temporal coverage of air pollution monitoring. This article examines the relationship between aerosol optical depth (AOD) estimated from satellite data at 5 km spatial resolution and the mass of fine particles ≤2.5 μm in aerodynamic diameter (PM(2.5)) monitored on the ground in Delhi Metropolitan where a series of environmental laws have been instituted in recent years.PM(2.5) monitored at 113 sites were collocated by time and space with the AOD computed using the data from Moderate Resolution Imaging Spectroradiometer (MODIS onboard the Terra satellite). MODIS data were acquired from NASA's Goddard Space Flight Center Earth Sciences Distributed Active Archive Center (DAAC). Our analysis shows a significant positive association between AOD and PM(2.5). After controlling for weather conditions, a 1% change in AOD explains 0.52±0.202% and 0.39±0.15% change in PM(2.5) monitored within ±45 and 150 min intervals of AOD data. This relationship will be used to estimate air quality surface for previous years, which will allow us to examine the time-space dynamics of air pollution in Delhi following recent air quality regulations, and to assess exposure to air pollution before and after the regulations and its impact on health.     

Estimation of PCDD/F distribution and fluxes in the Venice Lagoon,Italy: combining measurement and modelling approaches

The available experimental information on the occurrence of PCDD/Fs in the Venice Lagoon, Italy, was compiled and used to calculate fugacities for the environmental compartments of sediment, suspended particulate matter (SPM), water and air and then used to estimate fugacity ratios and assess the likely net direction of flux between media. The bottom sediment: SPM fugacity ratios for different PCDD/Fs indicate conditions close to equilibrium, suggestive of the close coupling of SPM with re-suspended sediment. Sediment/water and the sediment/air fugacity ratios suggest that net flux directions vary depending on the congener and the location within the lagoon. Net sediment-water-air movement (i.e. re-mobilisation/volatilisation) is suggested for the lighter congeners from the industrial canals, where the highest PCDD/F concentrations in the lagoon occur. The tendency to volatilise increases with decreasing congener molecular weight. In contrast, net deposition (air-water-sediment) appears to be occurring for the heaviest (hepta- and octa-) substituted PCDD/Fs. OCDF represents a marker of the industrial district of the lagoon, decreasing in concentration and as a fraction of total PCDD/Fs with increasing distance. The fugacity-based quantitative water air sediment interaction (QWASI) mass-balance model was applied to the central part of the lagoon. The key parameters for the determination of the model output, identified by a sensitivity analysis, were: the sediment active depth, the sediment re-suspension and deposition rates, and the total input of PCDD/Fs to the system. The QWASI model also indicates the tendency for the lighter PCDD/Fs to be released from surface sediment to the water column.