Sound Survey Designs Can Facilitate Integrating Stream Monitoring Data Across Multiple Programs1

Abstract: Multiple agencies in the Pacific Northwest monitor the condition of stream networks or their watersheds. Some agencies use a stream “network” perspective to report on the fraction or length of the network that either meets or violates particular criteria. Other agencies use a “watershed” perspective to report on the health or condition of watersheds. The agencies often use the same indicators and measurement protocols for data collection and often conduct monitoring in overlapping geographic regions. In these situations, agencies would like to combine data across different monitoring studies in a statistically sound manner to make regional estimates of condition. Three statistical survey design principles will facilitate combining such studies: (1) a clearly specified statistical target population of interest, including elements that comprise the population, (2) a consistent representation of that target population (such as a digital map of the stream network and watersheds), and (3) rules that incorporate randomization to guide the selection of the sample of sites on which measurements will be made. A case study illustrates the application of these design principles using two agency monitoring programs interested in combining stream channel data for different purposes: one for making network summaries and the other for evaluating watershed condition.     

Potential human health benefits of antibiotics used in food animals: a case study of virginiamycin

Risk management of food-animal antibiotics has reached a crucial juncture for public health officials worldwide. While withdrawals of animal antibiotics previously used to control animal bacterial illnesses are being encouraged in many countries, the human health impacts of such withdrawals are only starting to be understood. Increases in animal and human bacterial illness rates and antibiotic resistance levels in humans in Europe despite bans on animal antibiotics there have raised questions about how animal antibiotic use affects human health. This paper presents a quantitative human health risk and benefits assessment for virginiamycin (VM), a streptogramin antibiotic recommended for withdrawal from use in food animals in several countries. It applies a new quantitative Rapid Risk Rating Technique (RRRT) that estimates and multiplies data-driven exposure, dose-response, and consequence factors, as suggested by WHO (2003) to estimate human health impacts from withdrawing virginiamycin. Increased human health risks from more pathogens reaching consumers if VM use is terminated (6660 estimated excess campylobacteriosis cases per year in the base case) are predicted to far outweigh benefits from reduced streptogramin-resistant vancomycin-resistant Enterococcus faecium (VREF) infections in human patients (0.27 estimated excess cases per year in the base case). While lack of information about impacts of VM withdrawal on average human illnesses-per-serving of food animal meat precludes a deterministic conclusion, it appears very probable that such a withdrawal would cause many times more human illnesses than it would prevent. This qualitative conclusion appears to be robust to several scientific and modeling uncertainties.     

RUNOFF EVENT IMPACTS ON A WATER SUPPLY RESERVOIR: SUSPENDED SEDIMENT LOADING, TURBID PLUME BEHAVIOR, AND SEDIMENT DEPOSITION1

Abstract: The impacts of runoff events on external suspended solids loading to Schoharie Reservoir, New York, and patterns of light scattering and sediment deposition in this reservoir are assessed. The assessment is based on monitoring of suspended solids concentrations in the reservoir's primary tributary, detailed vertical profiles of optical backscattering (a surrogate measure of light scattering) in the reservoir water column, and analysis of sediment trap collections, over a seven-month interval of high runoff. These impacts are reported to be tightly temporally coupled and strongly positively related to the magnitude of runoff events. The primary tributary entered the reservoir as a plunging inflow during runoff events, causing conspicuous subsurface peaks in light scattering, with vertical patterns that varied strongly for different events. Deposition quantified by near-bottom trap deployments is reported to be more representative than results from metalimnetic deployments that were generally within, rather than below, the turbid layers. Direct inputs of sediment, transported by density currents, are found to drive deposition, rather than resuspension/redeposition. More than 50 percent of the reported deposition occurred in less than 15 percent of the study period, associated with the four largest runoff events.     

The Water Quality of some Tropical Freshwater Bodies in Uyo (Nigeria) Receiving Municipal Effluents, Slaughter-House Washings and Agricultural Land Drainage

The water quality of some tropical fresh-water bodies in Uyo (Nigeria) was investigated for two years in relation to point and non-point source city effluents and slaughter-house washings discharged into them. Streams which received city effluents and slaughter-house washings were degraded in quality with acidic water (pH =5.26±0.83 to 6.20±0.56), low oxygenation (2.46±1.30 to 3.88±0.29 mgl^–1), high biochemical oxygen demand (4.96±0.66 to 8.20±0.82 mgl^–1) and chemical oxygen demand (88.60±3.50 to 146.36±9.86 mgl^–1) than non-effluent receiving streams. High acidity in streams is due mainly to the acidic nature of underground water which replenishes the streams. Nutrient levels were high indicating enrichment from highly fertilized farmlands and slaughter-house washings. The concentrations of most of the hydrochemical variables were significantly lower in non-effluent than effluent-receiving streams. Some of the hydrochemical variables (total alkalinity, dissolved oxygen, nitrate, phosphate and conductivity) exhibited pronounced seasonality regimes with significant correlations with rainfall indicating its influence on the chemical hydrology of the water bodies. Land use in the catchment influenced water quality through inflow of nutrients, organic and inorganic contaminants and siltation. Pollution in the impacted streams is attributed mainly to episodic events.     

Interactions between morphological and physiological plasticity optimize energy acquisition in corals

Morphological plasticity in response to environmental heterogeneity may be performance enhancing or may simply result from an intrinsic instability in morphology during development. Although patterns of morphological change are well documented for numerous taxa, it is often unclear whether this plasticity enhances the performance of organisms in the habitat to which they have acclimatized. Reef-building corals are an ideal model system in which to investigate this question. We here develop a three-dimensional geometric model and present a comprehensive photosynthesis data set with experimentally calibrated photosynthesis models that predicts energy acquisition by foliose corals as a function of colony shape. This allows us to assess the extent to which changes in colony morphology along an environmental gradient track the predicted optimal colony morphologies. Our results provide strong evidence that phenotypic plasticity in foliose corals optimizes photosynthetic energy acquisition and is not simply a mechanism to increase light capture. We show that the optimal morphology is constrained at the boundaries of the environmental gradient, with non-optimal morphologies in these habitats having greatly reduced energy acquisition. However, at the center of the environmental gradient, flexibility in photophysiology allows energy acquisition to be very similar for multiple morphologies. Our results highlight the importance of phenotypic plasticity at multiple scales. Variation in overall morphology is important at niche boundaries at which conditions are consistently more stressful, whereas physiological flexibility is important in intermediate and less predictable habitats in which a rapid and reversible response to environmental fluctuations is required.     

Variation in colony geometry modulates internal light levels in branching corals, <Emphasis Type="Italic">Acropora humilis</Emphasis> and <Emphasis Type="Italic">Stylophora pistillata</Emphasis>

Colonial photosynthetic marine organisms often exhibit morphological phenotypic plasticity. Where such plasticity leads to an improved balance between rates of photosynthesis and maintenance costs, it is likely to have adaptive significance. To explore whether such phenotypic plasticity leads to more favourable within-colony irradiance for reef-building branching corals, this relationship was investigated for two coral species Acropora humilis and Stylophora pistillata, along a depth gradient representing light habitats ranging from 500 to 25 μmol photons m⁻² s⁻¹, during 2006 at Heron Island, Great Barrier Reef (23.44°S, 151.91°E). In the present study changes in flow-modulated mass transfer co-varied with light as a function of depth. In low-light (deep) habitats, branch spacing (colony openness) in A. humilis and S. pistillata was 40–50% greater than for conspecifics in high-light environments. Also, branches of A. humilis in deep water were 40–60% shorter than in shallow water. Phenotypic changes in these two variables lead to steeper within-colony light attenuation resulting in 38% higher mean internal irradiance (at the tissue surface) in deep colonies compared to shallow colonies. The pattern of branch spacing was similar for S. pistillata, but this species displayed an alternate strategy with respect to branch length: shade adapted deep and cave colonies developed longer and thinner branches, allowing access to higher mass transfer and irradiance. Corals in cave habitats allowed 20% more irradiance compared to colonies found in the deep, and had a 47% greater proportion of irradiance compared to colonies in the shallow high-light environment. Such phenotypic regulation of internal light levels on branch surfaces partly explains the broad light niches of many branching coral species. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Correlation and persistence of hunting and logging impacts on tropical rainforest mammals

Humans influence tropical rainforest animals directly via exploitation and indirectly via habitat disturbance. Bushmeat hunting and logging occur extensively in tropical forests and have large effects on particular species. But how they alter animal diversity across landscape scales and whether their impacts are correlated across species remain less known. We used spatially widespread measurements of mammal occurrence across Malaysian Borneo and recently developed multispecies hierarchical models to assess the species richness of medium‐ to large‐bodied terrestrial mammals while accounting for imperfect detection of all species. Hunting was associated with 31% lower species richness. Moreover, hunting remained high even where richness was very low, highlighting that hunting pressure persisted even in chronically overhunted areas. Newly logged sites had 11% lower species richness than unlogged sites, but sites logged >10 years previously had richness levels similar to those in old‐growth forest. Hunting was a more serious long‐term threat than logging for 91% of primate and ungulate species. Hunting and logging impacts across species were not correlated across taxa. Negative impacts of hunting were the greatest for common mammalian species, but commonness versus rarity was not related to species‐specific impacts of logging. Direct human impacts appeared highly persistent and lead to defaunation of certain areas. These impacts were particularly severe for species of ecological importance as seed dispersers and herbivores. Indirect impacts were also strong but appeared to attenuate more rapidly than previously thought. The lack of correlation between direct and indirect impacts across species highlights that multifaceted conservation strategies may be needed for mammal conservation in tropical rainforests, Earth's most biodiverse ecosystems. Correlación y Persistencia de los Impactos de la Caza y la Tala sobre los Mamíferos de los Bosques Tropicales     

The role of halophytic nanoparticles towards the remediation of degraded and saline agricultural lands

Environmental Science and Pollution Research - Salinity is one of the major causes of abiotic stress that leads to a reduction in crop yield. One strategy to alleviate and improve crop yield is to...     

Reactivity of litter leachates from California oak woodlands in the formation of disinfection by-products

Litter materials from forested watersheds can be a significant source of dissolved organic matter (DOM) to surface waters that can contribute to the formation of carcinogenic disinfection by-products (DBPs) during drinking-water chlorination. This study characterized the reactivity of DOM from litter leachates of representative vegetation in oak woodlands, a major plant community in the Foothill Region of California. Leachates from fresh and decomposed litter (duff) from two oak species, pine, and annual grasses were collected for an entire rainy season to evaluate their reactivity to form DBPs on chlorination. Relationships among specific ultraviolet absorbance (SΔUVA), fluorescence index (FI), specific differential ultraviolet absorbance (SΔUVA), specific chlorine demand (SCD), and the dissolved organic carbon:dissolved organic nitrogen (DOC:DON) ratio to the specific DBP formation potential (SDBP-FP) were examined. The DOM derived from litter materials had considerable reactivity in forming trihalomethanes (THMs) (1.80-3.49 mmol mol), haloacetic acid (HAAs) (1.62-2.76 mmol mol(-1)), haloacetonitriles (HANs) (0.12-0.37 mmol mol(-1)), and chloral hydrate (CHD) (0.16-0.28 mmol mol). These values are comparable to other identified watershed sources of DBP precursors reported for the California Delta, such as wetlands and organic soils. Vegetation type and litter decomposition stage (fresh litter versus 1-5 yr-old duff) were key factors that determined characteristics of DOM and their reactivity to form DBPs. Pine litter had significantly lower specific THM formation potential compared with oak and grass, and decomposed duff had a greater DON content, which is a precursor of HANs and other nitrogenous DBPs. The SΔUVA and SDBP-FP were temporally variable and dependent on vegetation type, degree of decomposition, and environmental conditions. Among the optical properties of DOM, SΔUVA was the only parameter that was consistently correlated with SDBP-FP.