Evaluation of interference to conventional and real-time PCR for detection and quantification of fungi in dust

Advances in polymerase chain reaction (PCR) have permitted accurate, rapid and quantitative identification of microorganisms in pure cultures regardless of viability or culturability. In this study, a simple sample processing method was investigated for rapid identification and quantification of fungal spores from dust samples using both conventional and real-time PCR. The proposed method was evaluated for susceptibility to interference from environmental dust samples. Stachybotrys chartarum and Aspergillus fumigatus were used as test organisms. The sensitivity of detection in pure culture was 0.1 spore DNA equivalents per PCR reaction corresponding to 20 spores ml(-1) in the sample. However, 1 spore DNA equivalent per PCR reaction corresponding to 200 spores ml(-1) in the sample was the lowest amount of spores tested without interference in dust samples spiked with spores of either fungal species. The extent of inhibition was calculated using conventional and real-time PCR reactions containing fungal spores, specific primers, specific probes (for real-time PCR) and various amounts of dust. The results indicate that the extent of inhibition by dust on PCR varies with the type and amount of dust, and number of spores. No interference in the analysis of spiked samples was detected from 0.2 mg ml(-1) of four real-life dust samples at p-value >0.05 using 2 x 10(4) spores for conventional PCR and 2 x 10(5) spores for real-time PCR. However, samples containing >0.2 mg ml(-1) real-life dust compromised the PCR assay. These results suggest the potential usefulness of a simple sample processing method in conjunction with PCR for monitoring the fungal content of aerosols collected from indoor environments.     

Land User Participation in Developing a Computerised Decision Support System for Combating Desertification

Combating desertification in natural rangelands has recently become a priority in large parts of southern Africa. Rangeland managers, farmers, scientists, conservationists and land users have been applying a variety of restoration technologies to address this problem. Bush encroachment, as part of the desertification process, involves the natural replacement of the herbaceous plant cover by undesirable problem woody species. The active and passive restoration technologies that are applied, are mainly based on indigenous knowledge and include the chemical, mechanical or manual reclamation of unproductive rangelands, as well as the combating of woody and alien species encroachment. Indigenous practices and knowledge play a major role in the effectiveness and success rate of these technologies. This project faces the challenge of bringing together both local and scientific knowledge in a single user-friendly, computerised Decision Support System (DSS) which is directly accessible by land users to support them in the process of decision making, concerning the combating of desertification. Case studies from central and northern Namibia were used to combine qualitative and quantitative data to develop this Decision Support System. The DSS currently consists of two databases and an expert system, which evaluates the results of land users’ management practices, and provides easily accessible information and advice for participants in the system, based on the incorporated data. The DSS is also linked to national and international web sites and databases to offer a wider range of information on technologies concerning agricultural and conservation practices.     

A Metamodeling Approach for Integrated Assessment of Air Quality Policies

A method is proposed to build integrated models (also called Metamodels) aimed at quantifying the economic efficiency of air quality policies. This Metamodeling approach is based on the coupling of two complementary models, that operate at different scales in space and time, and which represent the economic and the physical and chemical processes, respectively. The joint consideration of the physico-chemical and techno-economic structure of the pollution control problems permits a comprehensive evaluation of air pollution abatement strategies. The motivating pollution control problems include urban-regional air quality management through efficient energy and traffic control policies. A pilot study, exploiting data collected in the Geneva canton (Switzerland), is used to demonstrate the potential of the approach.     

Fractionation of butyltin species during sample extraction and preparation for analysis

Solvent extraction and evaporative concentration steps are often used in procedures for the measurement of butyltins in environmental samples. As part of a larger study utilizing radiolabeled butyltins, the loss and fractionation of butyltins during sample preparation was investigated. TBT, DBT, and MBT were extracted from acidified seawater by hexane with efficiencies of about 95–99, 50–60 and 11% respectively. In addition, losses of about 70% of DBT were found during evaporative concentration of hexane. A variety of sediment extraction procedures were tested and none were found to be highly efficient for total butyltin extraction.     

中国土壤中溴,碘的背景含量

通过对全国八百余个表层土样的分析测试,获得了中国土壤中溴、碘背景含量的总体水平及在各土类中的含量,相对于地壳丰度,中国土壤中溴、碘普遍得到了富集,溴、碘含量分异变化较大,并具有明显的地域分异特征,影响中国土壤中溴、碘含量的主要因素是降水量、土壤吸附体的含量以及某些特殊母质。     

Biodegradability: An assessment of commercial polymers according to the Canadian method for anaerobic conditions

The degradation of several biodegradable polymers was measured as a result of exposure to an anaerobic medium. The polymers investigated included materials based upon polylactic acid, polylactone, and poly(hydroxy butyrate/valerate) as well as those incorporating starch-based materials. The degradation was monitored by methane and carbon dioxide evolution. In addition, the physical and chemical changes were noted as a result of exposure. These measurements included changes in mass, dimension, and molecular weight. FTIR, UV-vis, proton, and¹³C NMR spectra were also recorded prior to and after exposure. The results clearly indicated that several biological and chemical degradation processes were occurring with the biodegradable polymers studied.Paper presented at the Bio/Environmentally Degradable Polymer Society—Second National Meeting, August 19–21, 1993, Chicago, Illinois.Issued as NRCC No. 37549.     

Structural and functional responses of a freshwater plankton community to acute copper stress

An in-situ experiment was performed to quantify the impacts of copper sulfate on plankton structure and carbon dynamics. Plankton were exposed to 140 microg litre(-1) copper in quadruplicate mesocosms. Community structure was monitored for 14 days by microscopical counts and compared with untreated controls. Carbon dynamics were assessed by tracer studies using (14)C bicarbonate and (14)C glucose, to follow the fate of carbon in the algal- and bacterial-based pathways, respectively. Copper reduced the dry-weight biomass of zooplankton, ciliates, flagellates, and autotrophic phytoplankton. Bacterial biomass was increased by an order of magnitude relative to the controls. The bacterial response was most likely due to reduced grazing pressure and/or nutrient release from dying plankton. Copper reduced the effectiveness of the food web in transporting carbon to the surviving zooplankton. Bacterial-based pathways were more greatly affected than algal-based pathways, because zooplankton in the copper treatment were macro-grazers (cyclopoids), which cannot utilize bacteria.     

Book reviews

Cost Benefit Analysis of Environmental Change

Per‐Olov Johansson

Cambridge, Cambridge University Press, 1993, 232 pp., £13.95

Computerised Environmental Modelling: A Practical Introduction using Excel

J. Hardisty, D. M. Taylor & S. E. Metcalfe

Chichester, Wiley, 1993, 204 pp., £14.95

Keeping Pace with Science and Engineering: Case Studies in Environmental Regulation

Washington DC, US National Academy of Engineering, 1993

World Without End: Economics, Environment and Sustainable Development

D. W. Pearce & J. J. Warford

Oxford University Press, New York, 1993, 440 pp., £35.95     

Phytomonitoring and management of tar piles on the Qatari coastal marshes, Arabian Gulf

Most of the shores in Qatar and other oil producing countries have had a long history of crude oil pollution from different sources. This pilot study was to assess the problem and suggest a management programme for disposing of the collected tar or lessening the impact of tar accumulation. The vegetation on the sites used for dumping tar was used in a field survey to identify bioindicators of tar pollution and of the natural recovery of polluted sites. The phytomonitoring results indicate that recovery of polluted sites can be quite rapid after clean-up and restoration. To facilitate natural plant invasion and colonization, and the restoration of tar piles, the dumping sites must have plant communities with high species diversity and a high percentage of annual plants. Depending on the sand-tar ratio in the piles, artificial seeding of selected plant species (listed) can be applied by using species mixes or single species seeding. Management techniques are suggested to optimize the natural recovery and revegetation of tar-affected coastal marshes.     

用液相催化法和脱硫除尘器脱除烟气中SO_2

在由旋风水膜和两块旋流塔板组成的处理气量为７５０ｍ￣３／ｈ的二级脱硫除尘器中，进行了用含催化剂Ｍｎ￣（２＋）的水溶液吸收ＳＯ_２的扩大试验。结果表明，在确定的条件下，脱硫率达到７３％，板效率为０．２５～０．２８。在同一设备中同时完成除尘与脱硫过程，设备投资少；以水为吸收剂，运行费用低；中性条件下吸收，长期运转不结垢，可靠性高。