Spatiotemporal changes and fragmentation of mangroves and its effects on fish diversity in Ca Mau Province (Vietnam)

Mangroves are important economically and ecologically, however mangrove cover has declined dramatically leading to habitat fragmentation and biodiversity loss. Information on mangrove cover change, fragmentation and impacts on fish diversity is poorly understood. The aims of this study are to detect spatiotemporal changes and mangrove status, examine fragmentation changes and associated effects on fish diversity. Landsat images in1989, 2000, and 2013 were used to classify mangrove cover in Ca Mau Province (Vietnam) and validated against high resolution Pleiades imagery. Fragmentation changes in mangrove cover were examined using series of landscape metrics evaluated against fish diversity indices (Simpson’s index, Jaccard’s coefficient and relative abundance). Results show that mangrove cover has declined 24.6% in the province. Currently, high and moderately dense mangroves distribute in southern half of the region while the low density mangroves occurs in the northern half. Over the 24 year study periods, the number of patches and edge density has increased 58% and 53.9%, respectively, while the mean patch size and mean patch edge has decreased 52.3% and 26.6%. Fish diversity in the more highly fragmented mangrove area was 1.78 times lower than the less fragmented mangrove. The study illustrates the applicability of using Landsat satellite imagery for use in mangrove fragmentation studies as well as the impact of fragmentation.     

Experimental assessment of characteristic turbulent scales in two-phase flow of hydraulic jump: from bottom to free surface

A hydraulic jump is a turbulent shear flow with a free-surface roller. The turbulent flow pattern is characterised by the development of instantaneous three-dimensional turbulent structures throughout the air–water column up to the free surface. The length and time scales of the turbulent structures are key information to describe the turbulent processes, which is of significant importance for the improvement of numerical models and physical measurement techniques. However, few physical data are available so far due to the complexity of the measurement. This paper presents an investigation of a series of characteristic turbulent scales for hydraulic jumps, covering the length and time scales of turbulent flow structures in bubbly flow, on free surface and at the impingement point. The bubbly-flow turbulent scales are obtained for Fr = 7.5 with 3.4 × 10⁴ < Re < 1.4 × 10⁵ in both longitudinal and transverse directions, and are compared with the free-surface scales. The results highlight three-dimensional flow patterns with anisotropic turbulence field. The turbulent structures are observed with different length and time scales respectively in the shear flow region and free-surface recirculation region. The bubbly structures next to the roller surface and the free-surface fluctuation structures show comparable length and time scales, both larger than the scales of vortical structures in the shear flow and smaller than the scales of impingement perimeter at the jump toe. A decomposition of physical signals indicates that the large turbulent scales are related to the unsteady motion of the flow in the upper part of the roller, while the high-frequency velocity turbulence dominates in the lower part of the roller. Scale effects cannot be ignored for Reynolds number smaller than 4 × 10⁴, mainly linked to the formation of large eddies in the shear layer. The present study provides a comprehensive assessment of turbulent scales in hydraulic jump, including the analyses of first data set of longitudinal bubbly-flow integral scales and transverse jump toe perimeter integral scales.     

Modeling and data assessment of longitudinal salinity in a low-gradient estuarine river

Continuous data of vertical-profile salinity were analyzed for four stations located successively upriver in a macrotidal estuary, the lower St. Johns River (Northeast Florida, USA). The data analysis confirmed well-mixed salinity conditions in the river with at most 1.3 ppt of vertical variability at Dames Point (river km 20), where the main variations of salinity are along the longitudinal axis of the river. Given the well-mixed salinity conditions and dominant horizontal structure of salinity variations in the river, we present and apply a barotropic, two-dimensional modeling approach for hydrodynamic-salinity transport simulation in the lower St. Johns River. When properly forced by offshore surge, high-resolution wind fields and freshwater river inflows, the model replicated the salinity measurements remarkably well, including the separation into tidal and sub-tidal components. The data and model results show that, at times, offshore winds and surge can be more influential on longitudinal salinity variations than local winds over the river. We demonstrate the importance of using proper boundary conditions to force the model relative to the minimal sensitivity of the model to parameter adjustment of horizontal mixing and uncertainty-based perturbation of wind and inflow forcings.     

Direct measurements of the drag force over aligned arrays of cubes exposed to boundary-layer flows

Wind tunnel measurements of the total drag force for aligned arrays of cubes exposed to two different boundary-layer flows at three flow velocities are discussed. The drag force for eight different building packing densities λ _p (from 0.028 to 1) is measured with a standard load cell generating a novel dataset. Different λ _p are reproduced by increasing the number of buildings on the same lot area; this represents a real situation that an urban planner is faced with when a lot area of a given (fixed) size is allocated to the development of new built areas. It is assumed that the surrounding terrain is uniform and there is a transition from a given roughness (smooth) to a new roughness (rough). The approaching flow will adjust itself over the new surface within a distance that in general may be larger than the horizontal length covered by the array. We investigate the region where the flow adjustment occurs. The wide range of packing densities allowed us to analyse in detail the evolution of the drag force. The drag force increases with increasing packing densities until it reaches a maximum at an intermediate packing density (λ _p  = 0.25 in our case) followed by a slight decrease at larger packing densities. The value of the drag force depends on the flow adjustment along the array which is evaluated by introducing the parameter “drag area” to retrieve information about the drag distribution at different λ _p . Results clearly suggest a change of the distribution of the drag force, which is found to be relatively uniform at low packing densities, while most of the force acts on first rows of the arrays at large packing densities. The drag area constitutes the basis for the formulation of a new adjustment length scale defined as the ratio between the volume of the air within the array and the drag area. The proposed adjustment length scale automatically takes into account the change in drag distribution along the array for a better parameterization of urban effects in dispersion models.     

Comparison of analytical descriptions of nocturnal low-level jets within the Ekman model framework

This study focuses on the inertial oscillation aspect of the nocturnal low-level jet (NLLJ). In the context of the Ekman model solutions, conceptual NLLJ inertial oscillation analytical frameworks proposed by Blackadar in 1957 and Shapiro and Fedorovich and van de Wiel et al. in 2010 are compared. Considering a NLLJ produced via direct numerical simulation over flat terrain with no baroclinic influence as a reference case, the deficiencies of each framework in representing a realistic NLLJ are assessed. The Blackadar theory results in unrealistic wind profiles near the surface. While extensions of Blackadar’s framework by Shapiro and Fedorovich and van de Wiel et al. produce more realistic NLLJs, the simpler approach taken by van de Wiel et al. does not describe the NLLJ wind hodograph at later times sufficiently in qualitative terms.     

Influence of the secondary motions on pollutant mixing in a meandering open channel flow

This paper presents large eddy simulation of turbulent flow in a meandering open channel with smooth wall and rectangular cross-section. The Reynolds number based on the channel height is 40,000 and the aspect ratio of the cross-section is 4.48. The depth-averaged mean stream-wise velocity agree well to experimental measurements. In this specific case, two interacting cells are formed that swap from one bend to the other. Transport and mixing of a pollutant is analysed using three different positions of release, e.g. on the inner bank, on the outer bank and on the centre of the cross section. The obtained depth-average mean concentration profiles are reasonably consistent with available experimental data. The role of the secondary motions in the mixing processes is the main focus of the discussion. It is found that the mixing when the scalar is released on the centre of the cross-section is stronger and faster than the mixing of the scalar released on the sides. When the position of release is close to a bank side, the mixing is weaker and a clear concentration of scalar close to the corresponding side-wall can be observed in both cases.     

The fungicide difenoconazole alters mRNA expression levels of human CYP3A4 in HepG2 cells

The fungicide difenoconazole has been frequently detected in agricultural products, soils and surface waters, causing increasingly public concern due to toxicological properties. Although systemic triazole fungicides can inhibit the enzymatic activity of many CYP450 isozymes, how difenoconazole affects the human CYP3A4 still remains largely unknown. We thus investigated the effect of difenoconazole on normal mRNA expression and protein expression of human CYP3A4 by real-time quantitative PCR and western blot, respectively. Results show that the exposure to difenoconazole from 0.01 to 0.5 μM for 24 h down-regulates mRNA expression levels of human CYP3A4 in HepG2 cells. We also found that difenoconazole could inhibit the enzymatic activity of human CYP3A4 in a concentration-dependent mode. The IC₅₀ of difenoconazole for inhibition of CYP3A4 activity is 0.41 µM, showing a stronger inhibitor in comparison with ketoconazole. Overall, our findings indicate the potential risk of difenoconazole for the disruption of human CYP3A4.     

H and O isotopic differences in typhon and urban-induced heavy rain in Tokyo

Stable isotope ratios of hydrogen and oxygen of water are useful tracers of the hydrological cycle. For example, isotopes monitor the evapotranspiration in vegetated areas, local snow ice processes and stream water flow processes. δ¹⁸O and δD in rainwater reflect the processes of evaporation, condensation and precipitation. Heavy rains thus modify the stable isotope ratio of ground water, stream water and transpiration water vapor. However, the controlling factors of δ¹⁸O and δD are not clear. Here we analyzed the inorganic ion concentration and stable isotope ratio in 38 normal rainwater and 15 heavy rainwater samples were collected in Shinjuku, Tokyo, Japan, during four years from October 2012 to December 2015. Results show a decrease in δ¹⁸O and δD values with the total rainfall amount, thus highlighting the amount effect. δ¹⁸O and δD volume-weighted mean values in typhoon heavy rain were higher than the values estimated from amount effect, whereas δ¹⁸O and δD volume-weighted mean values in urban-induced heavy rain were lower. Typhoon heavy rain has high Na⁺ ratio and stable isotope ratios, while urban-induced heavy rain has low Na⁺ ratio and stable isotope ratio.     

Heavy metals and soil microbes

Heavy metal pollution is a global issue due to health risks associated with metal contamination. Although many metals are essential for life, they can be harmful to man, animal, plant and microorganisms at toxic levels. Occurrence of heavy metals in soil is mainly attributed to natural weathering of metal-rich parent material and anthropogenic activities such as industrial, mining, agricultural activities. Here we review the effect of soil microbes on the biosorption and bioavailability of heavy metals; the mechanisms of heavy metals sequestration by plant and microbes; and the effects of pollution on soil microbial diversity and activities. The major points are: anthropogenic activities constitute the major source of heavy metals in the environment. Soil chemistry is the major determinant of metal solubility, movement and availability in the soil. High levels of heavy metals in living tissues cause severe organ impairment, neurological disorders and eventual death. Elevated levels of heavy metals in soils decrease microbial population, diversity and activities. Nonetheless, certain soil microbes tolerate and use heavy metals in their systems; as such they are used for bioremediation of polluted soils. Soil microbes can be used for remediation of contaminated soils either directly or by making heavy metals bioavailable in the rhizosphere of plants. Such plants can accumulate 100 mg g^?1 Cd and As; 1000 mg g^?1 Co, Cu, Cr, Ni and 10,000 mg g^?1 Pb, Mn and Ni; and translocate metals to harvestable parts. Microbial activity changes soil physical properties such as soil structure and biochemical properties such as pH, soil redox state, soil enzymes that influence the solubility and bioavailability of heavy metals. The concept of ecological dose (ED₅₀) and lethal concentration (LC₅₀) was developed in response to the need to easily quantify the influence of pollutants on microbial-mediated ecological processes in various ecosystems.     

Polyurethane for removal of organic dyes from textile wastewater

Synthetic organic dyes are extensively used in consumer products from textile to pharmaceuticals. A large amount of organic dyes is ultimately discharged as effluent into water bodies, thus posing a serious threat to environment and life. Therefore, removal of dyes from water bodies is needed. To address this problem, various synthetic and natural materials have been used to adsorb dyes. Here, we review the application of polyurethane for removal of organic dyes. First, we review the application of simple and modified polyurethane as efficient and economic adsorbents for dyes. Secondly, we review the polyurethane-based membranes for separation and adsorption of various dyes. Thirdly, we describe polyurethane composites with improved efficiency of dyes removal. Finally, we review the bioremediation of dyes where polyurethane has been proven as an excellent inert support.