The oxygen microenvironment adjacent to the tissue of the scleractinian Dichocoenia stokesii and its effects on symbiont metabolism

The biology of symbiotic scleractinians is profoundly influenced by their intracellular zooxanthellae, and many studies have focused on the mechanistic basis of this influence. This has usually been accomplished by examining the metabolism of zooxanthellae under physical conditions measured in the open reef and assumed to be similar to conditions in hospite. Recent advances in the measurement of conditions near and within coral tissue suggests that this assumption may result in substantial errors. To address this possibility, the role of water flow in determining oxygen saturation adjacent to the tissue of Dichocoenia stokesii was investigated, and the effect of these measured oxygen saturations on the respiration and photosynthesis of zooxanthellae isolated from the same species was quantified. Using a microelectrode (700 μm diam), we measured oxygen saturations above (≤4 mm) the tissue in two flow speeds over 24 h periods in a flume receiving sunlight at in situ levels. The results were used as a proxy for ecologically relevant intracellular oxygen saturations, which were applied to zooxanthellae in vitro to assess their effect on symbiont metabolism. Microenvironment oxygen saturations (% air saturation) ranged from 74–159% in slow flow (2.7 cm s⁻¹) to 88–110% in faster flow (7.5 cm s⁻¹) over day–night cycles. Therefore, the metabolic rates of zooxanthellae were measured at 50 to 54% (hypoxia), 98 to 102% (normoxia) and 146 to 150% (hyperoxia) oxygen saturation. Oxygen saturation significantly affected the metabolism of zooxanthellae, with gross photosynthesis increasing 1.2-fold and dark respiration increasing 2-fold under hyperoxia compared to hypoxia. These results suggest that the metabolism of zooxanthellae in hospite is affected markedly by their microenvironment which, in turn, is influenced by flow-mediated mass transfer. Received: 13 July 1998 / Accepted: 30 April 1999     

Brooded coral larvae differ in their response to high temperature and elevated pCO2 depending on the day of release

To evaluate the effects of temperature and pCO₂ on coral larvae, brooded larvae of Pocillopora damicornis from Nanwan Bay, Taiwan (21°56.179′N, 120°44.85′E), were exposed to ambient (419–470 μatm) and high (604–742 μatm) pCO₂ at ~25 and ~29 °C in two experiments conducted in March 2010 and March 2012. Larvae were sampled from four consecutive lunar days (LD) synchronized with spawning following the new moon, incubated in treatments for 24 h, and measured for respiration, maximum photochemical efficiency of PSII (F _v/F _m), and mortality. The most striking outcome was a strong effect of time (i.e., LD) on larvae performance: respiration was affected by an LD × temperature interaction in 2010 and 2012, as well as an LD × pCO₂ × temperature interaction in 2012; F _v/F _m was affected by LD in 2010 (but not 2012); and mortality was affected by an LD × pCO₂ interaction in 2010, and an LD × temperature interaction in 2012. There were no main effects of pCO₂ in 2010, but in 2012, high pCO₂ depressed metabolic rate and reduced mortality. Therefore, differences in larval performance depended on day of release and resulted in varying susceptibility to future predicted environmental conditions. These results underscore the importance of considering larval brood variation across days when designing experiments. Subtle differences in experimental outcomes between years suggest that transgenerational plasticity in combination with unique histories of exposure to physical conditions can modulate the response of brooded coral larvae to climate change and ocean acidification.     

Simulating Unstressed Crop Development and Growth Using the Unified Plant Growth Model (UPGM)

Since initial development of the EPIC model in 1989, the EPIC plant growth component has been incorporated into other erosion and crop management models (e.g., WEPS, WEPP, SWAT, ALMANAC, and GPFARM) and subsequently modified to meet research objectives of the model developers. This has resulted in different versions of the same base plant growth component. The objectives of this study are the following: (1) describe the standalone Unified Plant Growth Model (UPGM), initially derived from the WEPS plant growth model, to be used for merging enhancements from other EPIC-based plant growth models; and (2) describe and evaluate new phenology, seedling emergence, and canopy height sub-models derived from the Phenology Modular Modeling System (PhenologyMMS V1.2) and incorporated into UPGM. A 6-year (2005–2010) irrigated maize (Zea mays L.) study from northeast Colorado was used to calibrate and evaluate UPGM running both the original (i.e., based on WEPS) and new phenology, seedling emergence, and canopy height sub-models. Model statistics indicated the new sub-models usually resulted in better simulation results than the original sub-models. For example when comparing original and new sub-models, respectively, for predicting canopy height, the root mean square error (RMSE) was 53.7 and 40.7 cm, index of agreement (d) was 0.84 and 0.92, relative error (RE) was 26.0 and ?1.26 %, and normalized objective function (NOF) was 0.47 and 0.33. The new sub-models predict leaf number (old sub-models do not), with mean values for 4 years of 2.43 leaves (RMSE), 0.78 (d), 18.38 % (RE), and 0.27 (NOF). Simulating grain yield, final above ground biomass, and harvest index showed little difference when running the original or new sub-models. Both the new phenology and seedling emergence sub-models respond to varying water deficits, increasing the robustness of UPGM for more diverse environmental conditions. Future research will continue working to incorporate existing enhancements from other EPIC-based plant growth models to unify them into one model such as multispecies competition and N cycling.     

Simulation of the migration and transformation of petroleum pollutants in the soils of the Loess plateau: a case study in the Maling oil field of northwestern China

We developed a coupled water–oil simulation model to simulate the migration and transformation of petroleum-derived contaminants in the soil of the Xifeng oil field. To do so, we used the HYDRUS-2D model, which simulates the diffusion, adsorption or desorption, and microbial degradation of petroleum-derived hydrocarbons in the soil–water system. The saturated soil hydraulic conductivity of petroleum-derived pollutants was 0.05 cm?day^?1, which is about 1 to 2 % of the soil moisture permeability coefficient. Our numerical simulation results show that spilled crude oil was mainly concentrated in the surface horizons of the soil. The organic pollutant concentration tended to be highest nearest to the pollution source. The pollutant migration was generally concentrated within the top 20 to 30 cm of the soil, with the maximum concentration in the top 5 cm of the soil. With passing time, the pollutant accumulation increased and the adsorption and degradation functions reached a dynamic balance with the input rate at depths greater than 30 cm below the soil surface. The oil-derived pollutants totaled 50 to 100 mg?kg^?1 under the dynamic balance condition, which occurred after 20 to 30 years. The petroleum-derived pollutant concentration in the loess soil was inversely correlated with the horizontal distance from the oil well, and the concentration decreased greatly at a distance greater than 40 m from the well.     

Effect of pCO2 on the growth, respiration, and photophysiology of massive Porites spp. in Moorea, French Polynesia

I tested the hypothesis that high pCO₂ (76.6 Pa and 87.2 Pa vs. 42.9 Pa) has no effect on the metabolism of juvenile massive Porites spp. after 11 days at 28 °C and 545 μmol quanta m⁻² s⁻¹. The response was assessed as aerobic dark respiration, skeletal weight (i.e., calcification), biomass, and chlorophyll fluorescence. Corals were collected from the shallow (3–4 m) back reef of Moorea, French Polynesia (17°28.614′S, 149°48.917′W), and experiments conducted during April and May 2011. An increase in pCO₂ to 76.6 Pa had no effect on any dependent variable, but 87.2 Pa pCO₂ reduced area-normalized (but not biomass-normalized) respiration 36 %, as well as maximum photochemical efficiency (F _v/F _m) of open RCIIs and effective photochemical efficiency of RCIIs in actinic light (∆F/); neither biomass, calcification, nor the energy expenditure coincident with calcification (J g⁻¹) was effected. These results do not support the hypothesis that high pCO₂ reduces coral calcification through increased metabolic costs and, instead, suggest that high pCO₂ causes metabolic depression and photochemical impairment similar to that associated with bleaching. Evidence of a pCO₂ threshold between 76.6 and 87.2 Pa for inhibitory effects on respiration and photochemistry deserves further attention as it might signal the presence of unpredictable effects of rising pCO₂.     

Effect of acclimatization to low temperature and reduced light on the response of reef corals to elevated temperature

This study tested the effects of acclimatization on the response of corals to elevated temperature, using juvenile massive Porites spp. and branching P. irregularis from Moorea (W149°50′, S17°30′). During April and May 2006, corals were acclimatized for 15 days to cool (25.7°C) or ambient (27.7°C) temperature, under shaded (352 μmol photons m⁻² s⁻¹) or ambient (554 μmol photons m⁻² s⁻¹) natural light, and then incubated for 7 days at ambient or high temperature (31.1°C), under ambient light (659 μmol photons m⁻² s⁻¹). The response to acclimatization was assessed as biomass, maximum dark-adapted quantum yield of PSII (F _v/F _m), and growth, and the effect of the subsequent treatment was assessed as F _v/F _m and growth. Relative to the controls (i.e., ambient temperature/ambient light), massive Porites spp. responded to acclimatization through increases in biomass under ambient temperature/shade, and low temperature/ambient light, whereas P. irregularis responded through reduced growth under ambient temperature/shade, and low temperature/ambient light. Acclimatization affected the response to thermal stress for massive Porites spp. (but not P. irregularis), with an interaction between the acclimatization and subsequent treatments for growth. This interaction resulted from a lessening of the negative effects of high temperature after acclimatizing to ambient temperature/shade, but an accentuation of the effect after acclimatizing to low temperature/shade. It is possible that changes in biomass for massive Porites spp. are important in modulating the response to high temperature, with the taxonomic variation in this effect potentially resulting from differences in morphology. These results demonstrate that corals can acclimatize during short exposures to downward excursions in temperature and light, which subsequently affects their response to thermal stress. Moreover, even con-generic taxa differ in this capacity, which could affect coral community structure. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Molecular characterization of symbiotic algae (Symbiodinium spp.) in soritid foraminifera (Sorites orbiculus) and a scleractinian coral (Orbicella annularis) from St John,US Virgin Islands

The exchange of Symbiodinium symbionts among scleractinian and soritid hosts could facilitate acclimatization to changing conditions by establishing novel symbiotic unions better tuned to prevailing conditions. In this study, we compare the communities of Symbiodinium spp. in neighboring populations of Orbicella annularis and Sorites orbiculus from St. John, US Virgin Islands, using operational taxonomic unit (OTU) clustering of cloned internal transcribed spacer 2 (ITS-2) rDNA sequences. We tested for partitioning of Symbiodinium OTUs by host and depth within and between two sites to explore the potential for symbiont exchange between hosts and light-dependent microhabitat specialization. An apparent lack of overlap in Symbiodinium communities (13 OTUs representing 7 clades) hosted by O. annularis and S. orbiculus suggests that exchange among these hosts does not occur. A low number of novel clade G ITS-2 sequences were found in one O. annularis and one S. orbiculus. A phylogenetic analysis of these sequences revealed them to be sub-clade G2 Symbiodinium, which are most commonly hosted by excavating clionid sponges. A permutational MANOVA revealed within host differences in the partitioning of Symbiodinium OTUs by site but not depth. This finding highlights the potential roles of either dissimilar environmental conditions between sites, or at least partial separation between populations, in determining the types of Symbiodinium contained in different hosts on a spatial scale of a few kilometers.