Xenobiotics: Substrates and inhibitors of the plant cytochrome P450

The ability of a plant cytochrome P450 to bind and metabolise plant endogenous molecules and xenobiotics was investigated. The work was performed on the yeast-expressed CYP73A1, a cinnamate 4-hydroxylase isolated fromHelianthus tuberosus. CYP73 controls the general phenylpropanoid pathway and is likely to be one of the most abundant sources of P450 in the biosphere. The enzyme shows a high selectivity toward plant secondary metabolites. Nevertheless, it oxygenates several small and planar xenobiotics with low efficiency, including an herbicide (chlorotoluron). One xenobiotic molecule, 2naphthoic acid, is hydroxylated with an efficiency comparable to that of the physiological substrate. This reaction was used to devise a fluorimetric test for the rapid measurement of enzyme activity. A series of herbicidal molecules (hydroxybenzonitriles) are shown to bind the active site without being metabolised. These molecules behave as strong competitive inhibitors of CYP73 with a K_i in the same micromolar range as the K_m for the physiological substrate. It is proposed that their inhibition of the phenylpropanoid pathway reinforces their other phytotoxic effects at the level of the chloroplasts. All our results indicate a strong reciprocal interaction between plant P450s and xenobiotics.     

Recombinant luminescent bacterial sensors for the measurement of bioavailability of cadmium and lead in soils polluted by metal smelters

Environmental hazard of heavy metals in soils depends to a large extent on their bioavailability. The approach used in this study enables the determination of bioavailable metals in solid-phase samples. Two recombinant bacterial sensors, one responding specifically to cadmium and the other to lead and cadmium by increase of luminescence (firefly luciferase was used as a reporter) were used to determine the bioavailability of these metals in soil-water suspensions (a contact assay) and respective particle-free extracts. Fifty agricultural soils sampled near zinc and lead smelters in the Northern France containing up to (mg/kg) 20.1 of Cd, 1050 of Pb and 1390 of Zn were analysed. As the soil matrix interferes with the assay, recombinant luminescent control bacteria lacking the metal recognizing protein and corresponding promoter (thus, being not metal-inducible) but otherwise comparable to the sensor bacteria (the same host bacterium and plasmid encoding luciferase) were used in parallel to take into account the possible quenching and/or stimulating effects of the sample on the luminescence of the sensor bacteria. Both, chemical and sensor analysis showed that only microg/l levels of metals were extracted from the soil into the water phase (0.1% of the total Cd, 0.07% of Pb and 0.5% of Zn). However, 115-fold more Cd and 40-fold more Pb proved bioavailable if the sensor bacteria were incubated in soil suspensions (i.e., in the contact assay). The bioavailability of metals in different soils varied (depending probably on soil type) ranging from 0.5% to 56% for cadmium and from 0.2% to 8.6% for lead.     

Why breed communally? Factors affecting fecundity in a communal breeding mammal: the banded mongoose (<Emphasis Type="Italic">Mungos mungo</Emphasis>)

Fecundity is an important component of fitness. In cooperatively breeding species, studies aimed at understanding the factors that affect fecundity have largely been restricted to species that exhibit high reproductive skew, where reproduction is monopolised by a few individuals. In such species, dominant suppression and inbreeding avoidance are the principal explanations for low fecundity in subordinate females. In this paper, we evaluate the relative effects of individual, social, and environmental factors on female fecundity in a low skew cooperative breeding mammal: the banded mongoose (Mungos mungo). Most females (80%) conceived in each breeding event, and most pregnant females (93%) carried their litter to term. The principal determinants of a females fecundity were intrinsic qualities, particularly age and body size. However, there was no evidence of dominant suppression of subordinate reproduction or inbreeding avoidance. Similarly, there was little indication that social or environmental factors influence fecundity. We suggest that in the banded mongoose, the apparent lack of costs to inbreeding, and the absence of dominant female suppression of reproduction in other females result in low reproductive skew. Indeed, in banded mongooses, like lions (Felis leo), multiple breeding may be a consequence of benefits to rearing young communally.Communicated by F. Trillmich     

Prior experience with eggs laid by non-nestmate queens induces egg acceptance errors in ant workers

We studied the effect of prior experience to eggs laid by nestmate and non-nestmate queens on the acceptance of queen-laid eggs by worker wood ants, Formica fusca. We transferred eggs from a non-nestmate queen into colonies during early spring, when their own queen was recommencing egg laying. A few weeks later, workers from these “experienced” colonies accepted eggs of both familiar (44% acceptance) and unfamiliar (40%) non-nestmate queens much more than workers from control colonies (2%) that had only had previous contact with their own queen’s eggs. Thus, prior exposure to eggs laid by a non-nestmate queen induces much greater acceptance of all non-nestmate queen-laid eggs. Mechanistically, we hypothesize that exposure to eggs from several queens may increase acceptance by causing a highly permissive acceptance threshold of non-nestmate queen-laid eggs rather than by widening the template for acceptable queen-laid eggs. These novel results show that egg-discrimination behaviour in F. fusca is flexible and that workers respond to the diversity of eggs experienced in their colony.     

Enhanced dichloroethene biodegradation in fractured rock under biostimulated and bioaugmented conditions

Significant microbial reductive dechlorination of [1,2 ¹⁴C] cis‐dichloroethene (DCE) was observed in anoxic microcosms prepared with unamended, fractured rock aquifer materials, which were colonized in situ at multiple depths in two boreholes at the Naval Air Warfare Center (NAWC) in West Trenton, New Jersey. The lack of significant reductive dechlorination in corresponding water‐only treatments indicated that chlororespiration activity in unamended, fractured rock treatments was primarily associated with colonized core material. In these unamended fractured rock microcosms, activity was highest in the shallow zones and generally decreased with increasing depth. Electron‐donor amendment (biostimulation) enhanced chlororespiration in some but not all treatments. In contrast, combining electron‐donor amendment with KB1 amendment (bioaugmentation) enhanced chlororespiration in all treatments and substantially reduced the variability in chlororespiration activity both within and between treatments. These results indicate (1) that a potential for chlororespiration‐based bioremediation exists at NAWC Trenton but is limited under nonengineered conditions, (2) that the limitation on chlororespiration activity is not entirely due to electron‐donor availability, and (3) that a bioaugmentation approach can substantially enhance in situ bioremediation if the requisite amendments can be adequately distributed throughout the fractured rock matrix. © 2012 Wiley Periodicals, Inc.*     

Honey bee waggle dance communication: signal meaning and signal noise affect dance follower behaviour

Returning honey bee foragers perform waggle dances to inform nestmate foragers about the presence, location and odour of profitable food sources and new nest sites. The aim of this study is to investigate how the characteristics of waggle dances for natural food sources and environmental factors affect dance follower behaviour. Because food source profitability tends to decrease with increasing foraging distance, we hypothesised that the attractiveness of a dance, measured as the number of dance followers and their attendance, decreases with increasing distance to the advertised food location. Additionally, we determined whether time of year and dance signal noise, quantified as the variation in waggle run direction and duration, affect dance follower behaviour. Our results suggest that bees follow fewer waggle runs as the food source distance increases, but that they invest more time in following each dance. This is because waggle run duration increases with increasing foraging distance. Followers responded to increased angular noise in dances indicating more distant food sources by following more waggle runs per dance than when angular noise was low. The number of dance followers per dancing bee was also affected by the time of year and varied among colonies. Our results provide evidence that both noise in the message, that is variation in the direction component, and the message itself, that is the distance of the advertised food location, affect dance following. These results indicate that dance followers may pay attention to the costs and benefits associated with using dance information.     

Trophic niche overlap among dolphinfish and co-occurring tunas near the northern edge of their range in the western North Atlantic

We present the first quantitative analyses of dolphinfish (Coryphaena hippurus) foraging habits and trophic interactions with co-occurring yellowfin (Thunnus albacares) and albacore (T. alalunga) tunas in the Southern New England region of the western North Atlantic Ocean. Fish caught by recreational anglers in offshore waters of Massachusetts were sampled during the summers of 2007–2010. Diet analysis revealed that shortfin squid (Illex illecebrosus) and small pelagic crustaceans were principal prey to dolphinfish, yellowfin tuna, and albacore tuna. A wide variety of Sargassum-associated fishes were also important to dolphinfish and yellowfin tuna diets. Dietary (Schoener’s index: 0.82–0.86) and isotopic niche (isotopic ellipse overlap: 53.6–64.7 %) overlap was high, and dolphinfish and tunas occupied equivalent trophic positions (TP = 3.4–3.6). Relative prey size in dolphinfish and yellowfin tuna diets exhibited convergence with ontogeny. Overall, dolphinfish had the greatest isotopic niche width, which was twice as large as yellowfin tuna and three times as large as albacore tuna; dolphinfish also consumed the greatest range of prey sizes. Results quantify dolphinfish trophic interactions in the western Atlantic near the northern extent of their geographical range, and are relevant for ecosystem-based management of the offshore pelagic guild in the context of shifting fish populations and fisheries in response to climate and ecological change.     

Amniotic fluid levels of human chorionic gonadotropin and its alpha and beta subunits in second-trimester chromosomally abnormal pregnancies

Amniotic fluid from 135 pregnancies was assayed for human chorionic gonadotropin (hCG) and its free alpha (ahCG) and free beta (bhCG) subunits. Forty-six chromosomally abnormal pregnancies between 14 and 20 weeks' gestation were matched with 89 chromosomally normal samples. Compared with controls, trisomy 21 pregnancies exhibited significantly elevated levels of all three peptides, whereas trisomy 18 gestations gave rise only to significant elevation of ahCG. Female fetuses in both the trisomy 21 and trisomy 18 pregnancies provided significantly elevated levels of hCG and bhCG compared to their male counterparts. On converting the values to multiples of the median, it was determined that 6 of 7 trisomy 18 samples had abnormally elevated alpha/beta ratios, as did 6 of 21 Down's syndrome pregnancies. Further, 11 of 21 trisomy 21 gestations had abnormal amniotic fluid hCG levels. Using only ahCG, bhCG and their ratio, a 61 per cent sensitivity was found for these trisomies, with a 96 per cent specificity.     

A primer for nonresponse in the US forest inventory and analysis program

Nonresponse caused by denied access and hazardous conditions are a concern for the USDA Forest Service, Forest Inventory and Analysis (FIA) program, whose mission is to quantify status and trends in forest resources across the USA. Any appreciable amount of nonresponse can cause bias in FIA’s estimates of population parameters. This paper will quantify the magnitude of nonresponse and describe the mechanisms that result in nonresponse, describe and qualitatively evaluate FIA’s assumptions regarding nonresponse, provide a recommendation concerning plot replacement strategies, and identify appropriate strategies to pursue that minimize bias. The nonresponse rates ranged from 0% to 21% and differed by land owner group; with denied access to private land the leading cause of nonresponse. Current FIA estimators assume that nonresponse occurs at random. Although in most cases this assumption appears tenable, a qualitative assessment indicates a few situations where the assumption is not tenable. In the short-term, we recommend that FIA use stratification schemes that make the missing at random assumption tenable. We recommend the examination of alternative estimation techniques that use appropriate weighting and auxiliary information to mitigate the effects of nonresponse. We recommend the replacement of nonresponse sample locations not be used.