Studying ecological communities from a neutral standpoint: A review of models’ structure and parameter estimation

Neutral models provide an alternative to niche-based assembly rules of ecological communities by assuming that communities’ properties are shaped by the stochastic interplay between ecological drift, migration and speciation. The recent and ongoing interest about neutral assumptions has produced many developments on the theoretical side, with nevertheless limited echoes in terms of analyses of real-world data. The present review paper aims to help bridge the widening gap between modellers and field ecologists through two objectives. First, to provide a multi-criteria typology of the main neutral models, including those from population genetics that have not yet been transposed to ecology, by considering how the fundamental processes of ecological drift, speciation and migration are modelled and, specifically, how space is taken into account. Second, to review methods recently proposed to estimate models parameters from field data, a point that should be mastered to allow for broader applications.     

Are the Precautionary Principle and the International Trade of Genetically Modified Organisms Reconcilable?

This paper seeks to find possibilities forreconciliation of the implementation of theprecautionary principle and the promotion ofinternational trade of genetically modified organisms,based on the assumption that a sustainabledevelopment is a right objective to strive for. Itstarts with an explanation of the background and therole of the precautionary principle, and describes inwhat way measures based on the precautionary principlecan easily lead to the creation of trade barriers. Thearticle then examines to what extent the WTO (WorldTrade Organisation) Agreements allow theimplementation of the precautionary principle. Inaddition, structural conflicts between the perceptionof the precautionary principle and the concept oftrade liberalisation will be evoked. The last sectionof the paper analyses to what extent the WTO rulesprovide possibilities to avoid or solve theseconflicts in order to attempt to answer the mainquestion: are the precautionary principle and theinternational trade of genetically modified organismsreconcilable?     

Prediction of extinction in plants: interaction of extrinsic threats and life history traits

The global extinction of species proceeds through the erosion of local populations. Using a 60-year time series of annual sighting records of plant species, we studied the correlates of local extinction risk associated with a risk of species extinction in the Park Grass Experiment where plants received long-term exposure to nutrient enrichment, soil acidification, and reductions in habitat size. We used multivariate linear models to assess how extrinsic threats and life history traits influence extinction risk. We investigated effects of four extrinsic threats (nitrogen enrichment, productivity, acidification, and plot size) as well as 11 life history traits (month of earliest flowering, flowering duration, stress tolerance, ruderalness [plant species' ability to cope with habitat disturbance], plant height, diaspore mass, seed bank, life form, dispersal mode, apomixis [the ability for a species to reproduce asexuall through seeds], and mating system). Extinction risk was not influenced by plant family. All of the 11 life history traits except life form and all threat variables influenced extinction risk but always via interactions which typically involved one threat variable and one life history trait. We detected comparatively few significant interactions between life history traits, and the interacting traits compensated for each other. These results suggest that simple predictions about extinction risk based on species' traits alone will often fail. In contrast, understanding the interactions between extrinsic threats and life history traits will allow us to make more accurate predictions of extinctions.     

Methods for integrated assessment

Integrated assessment is an approach that seeks to involve all disciplines in policy-relevant assessment. The process aims to encompass environmental science, technology and policy problems. The aim is to establish an overview of the environmental issue in question that attempts to avoid the mistakes of the past associated with narrow, one-sided or unidimensional approaches. A number of methods are available for such assessments. However, they are also subject to a number of limitations, difficulties and dilemmas. Integrated methods are inherently complicated and the tradition is that only experts are involved. New more inclusionary procedures have to be devised in order to involve all stakeholders. They have to be involved in the framing of the issue and in the value judgements associated with the approach. The dilemmas cannot be solved by integrated approaches, but they can be mitigated via proper identification, analysis and evaluation of the gains and losses involved. In structuring the analysis the existence of ignorance has to be accounted for and communicated to the managers and the political decision makers. The ignorance/uncertainty aspects can be partially accommodated for via an intensification of feasible monitoring and research so as to minimise the risks of unpleasant surprises. Electronic Publication     

Navigating protected areas as social-ecological systems: integration pathways of French nature reserves

Regional Environmental Change - On a global scale, protected areas (PAs) are one of the main tools used for biodiversity conservation. However, accelerated biodiversity loss and lack of social...     

Anti-predation behaviour of red colobus monkeys in the presence of chimpanzees

Predator-prey interactions are usually regarded as evolutionary “arms races”, but evidence is still scarce. We examined whether the anti-predation strategies of red colobus monkeys (Procolobus badius) are adapted to the hunting strategies of chimpanzees (Pan troglodytes) in the Taï National Park, Ivory Coast. Taï chimpanzees search for red colobus groups, approach them silently and hunt co-operatively. Our playback experiments and observations of natural encounters revealed that red colobus hid higher up the trees in positions where exposure to the forest floor is minimal and became silent, when chimpanzees were close. They moved away silently through the canopy, when chimpanzees were still at some distance. However, if a group of diana monkeys was nearby in the latter situation, red colobus sought their presence even if they had to move towards the chimpanzees. Chimpanzees refrained from hunting associated red colobus groups, probably because diana monkeys are excellent sentinels for predators approaching over the forest floor. Thus several elements of both the predator's and the prey's strategies correspond to each other. Finally, we compared the interactions between the two species in Taï and in Gombe, Tanzania. We suggest that the difference in size ratio between the two species at the two sites and adaptation of hunting techniques and of escape modes to different forest structures can explain why Gombe red colobus attack chimpanzees while Taï red colobus try to escape. We conclude that predator-prey interactions can indeed lead to evolutionary arms races, with the specific form of co-adaptations depending on environmental factors.     

Evolutionary genetics of marine Mysis spp. (Crustacea: Mysidacea)

Inter-and intraspecific allozyme differentiation in the mysid crustacean genus Mysis in the North Atlantic region was studied in order to evaluate earlier concepts of evolutionary and systematic relationships and to assess patterns of subdivision within widespread taxa. The results support a relatively ancient divergence of the marine and non-marine species of the genus, and are generally in line with the current subgeneric tridivision into Mysis s.str., Michteimysis and Auricomysis. However, the North American littoral species M. gaspensis should be returned to subgenus Mysis s.str. from its present position in Michteimysis with M. mixta. The closest observed affinities within Mysis s.str. were between M. gaspensis and the freshwater M. relicta group, and between M. oculata and M. litoralis. Intraspecific differentiation among North European coastal populations of M. oculata and M. litoralis was moderately strong (F _ST0.1), suggesting population bottlenecks and limited dispersal in the post-glacial time. On the other hand, ransoceanic differences were not essentially greater, indicating the systematic homogeneity and long-term dispersal capacity in the marine species. This contrasts with the strong genetic and systematic fragmentation earlier found within the circumboreal M. relicta species group.     

Evaluation of industrial waste black cumin (Nigella Sativa) for biohydrogen production without pretreatment

Environment, Development and Sustainability - The depletion of fossil fuels and the fact that fossil fuels pollute the environment accelerated the trend toward environmentally friendly energy...     

Field-scale modelling of carbon and nitrogen dynamics in soils amended with urban waste composts

Composting has emerged as a valuable route for the disposal of urban waste, with the prospect of applying composts on arable fields as organic amendments. Proper management of urban waste composts (UWC) requires a capacity to predict their impacts on carbon and nitrogen dynamics in the field, an issue in which simulation models are expected to play a prominent role.Here, we used a deterministic soil-crop model to simulate C–N dynamics in an arable field amended with three types of UWC (green waste and sludge, biodegradable waste, and solid waste), and a reference amendment (farmyard manure). The model is a version of CERES in which the soil C–N module was substituted with the NCSOIL model, whose microbiological parameters were determined from either laboratory incubation data or biochemical fractionation in a previous paper. CERES was tested against data from a field trial set up in 1998 in the Paris area, and managed as a maize (Zea mays L.)–wheat (Triticum aestivum L.) rotation. Comparison of observed and simulated data over the first 4 years of the field trial showed that CERES predicted the soil moisture and inorganic N dynamics reasonably well, as well as the variations in soil organic C. In particular, the parameterization of UWC organic matter from biochemical fractions achieved a similar fit as the parameterization based on incubation data. Wheat yields were also correctly predicted, but a systematic under-estimation of maize yields pointed at an under-estimation of spring and summer mineralization of N by CERES.Simulated N fluxes showed that the organic amendments induced an additional leaching ranging from 1 to 8 kg N ha⁻¹ yr⁻¹, which can be related to the initial mineral N content of the amendments. After 4 years, the composts had mineralized 3–8% of their initial organic N content, depending on their stability. Composts with slower N release had higher N availability for the crops. CERES could thus be used to aid in selecting the timing of compost application, in relation to its stability, based on both environmental and agronomical criteria.