Simple molecular method to distinguish the identity of Calanus species (Copepoda: Calanoida) at any developmental stage

Diagnostic morphological characteristics of copepods of the genus Calanus are restricted largely to minor variations in secondary sex characteristics. This presents a persistent problem in the identification of individuals to species level, especially for immature stages. We have developed a simple molecular technique to distinguish between the North Atlantic Calanus species (C. helgolandicus, C. finmarchicus, C. glacialis and C. hyperboreus) at any life stage. Using the polymerase chain-reaction (PCR), the mitochodrial large subunit (16S) ribosomal RNA (rRNA) gene was amplified from individual copepods preserved in ethanol. Subsequent digestion of the amplified products with the restriction enzymes DdeI and VspI, followed by electrophoretic separation in 2% agarose (Metaphor, FMC Ltd), produced a characteristic pattern for each species. The versatility of the method is demonstrated by the unambiguous identification to species of any life stage, from egg to adult, and of individual body parts. Received: 11 May 1998 / Accepted: 5 August 1998     

Photochemical reaction of nitro-polycyclic aromatic hydrocarbons: effect by solvent and structure

Photochemical degradation of 1-nitropyrene, 2-nitrofluorene, 2,7-dinitrofluorene, 6-nitrochrysene, 3-nitrofluoranthene, 5-nitroacenaphthene, and 9-nitroanthracene was examined in CHCl₃, CH₂Cl₂, DMF, DMF/H₂O (80/20), CH₃CN, or CH₃CN/H₂O (80/20). The degradation mostly follows the first order kinetics; but a few follow second order kinetics or undergo self-catalysis. The photodegradation rates follow the order: CHCl₃ > CH₂Cl₂ > DMF > DMF/H₂O > CH₃CN > CH₃CN/H₂O. DMF is an exceptional solvent because three of the seven compounds undergo self-catalytic reaction. 9-Nitroanthracene, which has a perpendicular nitro group, is the fastest, while the more compact 1-nitropyrene and 3-nitrofluoranthene are the slowest degrading compounds.     

Reproductive consequences of male body mass and aggressiveness depend on females’ behavioral types

Relatively few investigations explicitly test for concordant versus conflicting selection pressures from intrasexual versus intersexual selection. Here, we examine the effects of male body mass and behavioral type (BT) on reproductive success in the spider Anelosimus studiosus, with emphasis placed on the potential interaction between intrasexual and intersexual selection influences. Female A. studiosus exhibit either an aggressive-active or docile-passive BT, both of which co-occur in multifemale colonies. Males, in contrast, exhibit a more continuous distribution of behavioral tendencies. We investigated the male traits favored by females in five trial types: one docile female, one aggressive female, four docile females, four aggressive females, and two docile and two aggressive females. Male reproductive success was estimated by the number eggs produced by females following staged mating trials. In previous work, it was established that large aggressive males are favored in male–male contests, an intrasexual effect. However, large aggressive males were not universally favored here. We failed to detect an effect of male body mass or aggressiveness on reproductive success in trials with all docile females; however, in situations involving aggressive females, large aggressive males experienced diminished reproductive success relative to small docile males. Large, aggressive males were also more likely to be attacked and killed by aggressive females in the first 20 min of staged encounters and were more likely to be found dead after 72 h of unobserved interactions. Taken together, our data suggest that the reproductive consequences of male traits differ based on (1) the aspect of sexual selection being considered (intrasexual versus intersexual) and (2) the BT of their prospective mates: large aggressive males enjoy advantages in intrasexual selection and when courting docile females and small docile males experience reduced risk of cannibalism and increased reproductive success with aggressive females.     

Two unrelated fetuses with ITPR1 missense variants and fetal hydrops

We describe two fetuses from unrelated families with likely pathogenic variants in ITPR1 that presented with nonimmune fetal hydrops. Trio exome sequencing revealed a de novo heterozygous likely pathogenic missense variant c.7636G > A (p.Val2531Met) in ITPR1 (NM_001378452.1) in proband 1 and a de novo heterozygous likely pathogenic missense variant c.34G > A [p.Gly12Arg] in proband 2. Variants in ITPR1 have been associated with several genetic conditions, including spinocerebellar ataxia 15, spinocerebellar ataxia 29, and Gillespie syndrome. Our report on two patients details a previously undescribed severe fetal presentation of nonimmune hydrops fetalis associated with missense variants in the ITPR1 gene.     

High natural fusion rates in a botryllid ascidian

Many benthic colonial invertebrates have the ability to fuse and form chimeras with compatible colonies. Botryllid ascidians are model organisms for the study of the evolution of and molecular basis for allorecognition, and fusion rates have been determined for different populations and species by random sampling and fusion testing between individuals. However, natural fusion rates over time have not been documented. Nine settlement panels were deployed in Salem Harbor, Massachusetts, USA and Botrylloides violaceus settlement, growth, and fusion monitored from July to mid-August 2007. Seventy-three percent of the recruits observed fused with at least one other colony, while 4% neither fused nor were overgrown. Multifused colonies were not observed to grow faster than single colonies when growth was calculated as increase in size beyond the summation of fused entities; however, they were significantly larger. These results suggest that larvae settle in clumps of compatible individuals, and that large subtidal colonies may be the result of high numbers of fusions between compatible colonies.     

Estimates of species- and ecosystem-level respiration of woody stems along an elevational gradient in the Luquillo Mountains, Puerto Rico

We measured CO₂ efflux from stems of seven subtropical tree species situated along an elevational gradient in the Luquillo Mountains, Puerto Rico and scaled these measurements up to the landscape level based on modeled and empirical relations. The most important determinants of ecosystem stem respiration were species composition and stem temperature. At a species scale, measured CO₂ efflux per unit bole surface area at a given temperature was highest in the early successional species Cecropia schreberiana and lowest in species that inhabit high elevations such as Micropholis garciniifolia and Tabebuia rigida. Carbon dioxide efflux rates followed a diel pattern that lagged approximately 6 h behind changes in sapwood temperatures. At an ecosystem scale, our simulation model indicates a decreasing trend of stem respiration rates with increasing elevation due to shifts in species composition, lower temperatures and reductions in branch surface area. The highest estimated stem respiration rates were present in the lowland tabonuco forest type and the lowest rates were present in the elfin forest type (mean 7.4 and 2.1 Mg C ha⁻¹ yr⁻¹, respectively). There was slight temperature-induced seasonal variation in simulated stem respiration rates at low elevations, with a maximum difference of 19% between the months of February and July. Our results coincide well with those of Odum and Jordan [Odum, H.T., Jordan, C.F., 1970. Metabolism and evapotranspiration of the lower forest in a giant plastic cylinder. In: Odum, H.T., Pigeon, R.F. (Eds.), A Tropical Rain Forest: A Study of Irradiation and Ecology at El Verde, Puerto Rico. U.S. Atomic Energy Commission, Oak Ridge, TN, pp. I165–I189] for the tabonuco forest type and extend their work by presenting estimates and spatial patterns of woody tissue respiration for the entire mountain rather than for a single forested plot.     

Interference competition between introduced black rats and endemic Galápagos rice rats

Replicated field experiments were used to quantify and to describe the mechanism of competition between the introduced black rat Rattus rattus and the endemic Santiago rice rat Nesoryzomys swarthi on Santiago Island, Galápagos Islands, Ecuador. The removal of R. rattus significantly slowed the rate of seasonal population decline in N. swarthi. This effect was particularly evident for female, relative to male, N. swarthi and appeared to be driven solely by enhanced immigration; no other fitness or space use parameters were affected. The candidate hypotheses to explain the mechanism of competition were exploitation competition, interference by resource defense, and interference by aggressive encounter. To distinguish between hypotheses, we conducted a replicated resource supplementation experiment with patchy food, scattered food, and no food (control) treatments. The opportunistic R. rattus responded to the extra resources with increased adult immigration and juvenile recruitment, resulting in a significant abundance boost of sevenfold on patchy grids and fourfold on scattered grids. Females increased in body mass, and the breeding season was lengthened. In contrast, there was no change in the abundance of N. swarthi and no obvious benefit to reproduction. Instead, the costs of interference apparently outweighed the benefits of extra food: female N. swarthi increased in mass with supplementary food, but female (relative to male) immigration and residency were repressed on all supplemented areas. This response supported the hypothesis of interference by aggressive encounter, and we were able to rule out the alternative hypotheses. Although periodic population crashes of R. rattus on the arid north coast of Santiago may ameliorate its competitive impact, climate change may tip the balance. Control or eradication of R. rattus should improve future survival prospects for N. swarthi, but wildlife managers must be prepared for the potential eruption of the introduced house mouse Mus musculus, because this species experienced a release from interference competition and immigrated to removal areas.     

The effect of sodium chloride on the dissolution of calcium silicate hydrate gels

The use of cement based materials will be widespread in the long-term management of radioactive materials in the United Kingdom. One of the applications could be the Nirex reference vault backfill (NRVB) as an engineered barrier within a deep geological repository. NRVB confers alkaline conditions, which would provide a robust chemical barrier through the control of the solubility of some key radionuclides, enhanced sorption and minimised corrosion of steel containers. An understanding of the dissolution of C-S-H gels in cement under the appropriate conditions (e.g., saline groundwaters) is necessary to demonstrate the expected evolution of the chemistry over time and to provide sufficient cement to buffer the porewater conditions for the required time. A programme of experimental work has been undertaken to investigate C-S-H gel dissolution behaviour in sodium chloride solutions and the effect of calcium/silicon ratio (C/S), temperature and cation type on this behaviour. Reductions in calcium concentration and pH values were observed with samples equilibrated at 45 degrees C compared to those prepared at 25 degrees C. The effect of salt cation type on salt-concentration dependence of the dissolution of C-S-H gels was investigated by the addition of lithium or potassium chloride in place of sodium chloride for gels with a C/S of 1.0 and 1.8. With a C/S of 1.0, similar increases in dissolved calcium concentration with increasing ionic strength were recorded for the different salts. However, at a C/S of 1.8, anomalously high calcium concentrations were observed in the presence of lithium.     

Land use in Korean tidal wetlands: impacts and management strategies

The coastal landscapes in southwestern Korea include a diverse array of tidal wetlands and salt marshes. These coastal zones link the ecological functions of marine tidal wetlands and freshwater ecosystems with terrestrial ecosystems. They are rich in biological diversity and play important roles in sustaining ecological health and processing environmental pollutants. Korean tidal wetlands are particularly important as nurseries for economically important fishes and habitats for migratory birds. Diking, draining, tourism, and conversion to agricultural and urban uses have adversely affected Korean tidal wetlands. Recent large development projects have contributed to further losses. Environmental impact assessments conducted for projects affecting tidal wetlands and their surrounding landscapes should be customized for application to these special settings. Adequate environmental impact assessments will include classification of hydrogeomorphic units and consideration of their responses to biological and environmental stressors. As is true worldwide, Korean laws and regulations are changing to be more favorable to the conservation and protection of tidal wetlands. More public education needs to be done at the local level to build support for tidal wetland conservation. Some key public education points include the role of tidal wetlands in maintaining healthy fish populations and reducing impacts of nonpoint source pollution. There is also a need to develop procedures for integrating economic and environmental objectives within the overall context of sustainable management and land uses.