Assessing reef fish assemblage structure: how do different stereo-video techniques compare?

Measures of fish abundance, assemblage composition and length were compared when sampled by baited remote underwater stereo-video (stereo BRUV) and diver-operated stereo-video transects (stereo DOV) at the Houtman Abrolhos Islands and Ningaloo Reef. Species richness counts were 40% higher on stereo BRUV than stereo DOV. Stereo BRUVs also recorded a greater number of large-bodied targeted species in higher abundance than stereo DOV (e.g. Lethrinus nebulosus, Plectropomus leopardus) at the Houtman Abrolhos and at Ningaloo Reef. Many non-targeted species were also recorded in greater abundances on stereo BRUV than stereo DOV (e.g. Coris auricularis, Gymnothorax spp). Stereo DOV transects recorded a greater abundance of some small-bodied Pomacentridae, Labridae and Scaridae species than did stereo BRUV, particularly at Ningaloo Reef. This study demonstrates that choice of sampling technique for surveys of reef fish can lead to very different biological interpretations of fish assemblage structure.     

Sequestered defensive toxins in tetrapod vertebrates: principles, patterns, and prospects for future studies

Chemical defenses are widespread among animals, and the compounds involved may be either synthesized from nontoxic precursors or sequestered from an environmental source. Defensive sequestration has been studied extensively among invertebrates, but relatively few examples have been documented among vertebrates. Nonetheless, the number of described cases of defensive sequestration in tetrapod vertebrates has increased recently and includes diverse lineages of amphibians and reptiles (including birds). The best-known examples involve poison frogs, but other examples include natricine snakes that sequester toxins from amphibians and two genera of insectivorous birds. Commonalities among these diverse taxa include the combination of consuming toxic prey and exhibiting some form of passive defense, such as aposematism, mimicry, or presumptive death-feigning. Some species exhibit passive sequestration, in which dietary toxins simply require an extended period of time to clear from the tissues, whereas other taxa exhibit morphological or physiological specializations that enhance the uptake, storage, and/or delivery of exogenous toxins. It remains uncertain whether any sequestered toxins of tetrapods bioaccumulate across multiple trophic levels, but multitrophic accumulation seems especially likely in cases involving consumption of phytophagous or mycophagous invertebrates and perhaps consumption of poison frogs by snakes. We predict that additional examples of defensive toxin sequestration in amphibians and reptiles will be revealed by collaborations between field biologists and natural product chemists. Candidates for future investigation include specialized predators on mites, social insects, slugs, and toxic amphibians. Comprehensive studies of the ecological, evolutionary, behavioral, and regulatory aspects of sequestration will require teams of ecologists, systematists, ethologists, physiologists, molecular biologists, and chemists. The widespread occurrence of sequestered defenses has important implications for the ecology, evolution, and conservation of amphibians and reptiles.     

Technical Aspects of Lime/Limestone Scrubbers for Coal-Fired Power Plants

This 2-part article deals with the technical aspects of lime/limestone scrubbers for coal-fired power plants. Part I covers process chemistry and scrubber systems. Part II (next month) will cover instrumentation, particulate removal, and sludge disposal.     

Removal of Volatile Aliphatic Hydrocarbons in a Soil Bioreactor

Soil removal of propane, isobutane and n-butane from a waste air stream was evaluated in the laboratory and in a prototype soil bioreactor. Laboratory investigations indicated first-order kinetics and the potential to degrade light aliphatic hydrocarbons and trichlorethylene, a compound ordinarily resistant to aerobic biological treatment. The predicted behavior of the bioreactor, based on laboratory studies, agreed closely with the actual behavior of the Reid system. The prototype bioreactor reduced the hydrocarbon concentrations in the air by at least 90percent with a residence time of 15 minutes and a pressure drop of 85 cm of water. The bioreactor functioned well through a range of temperatures, 12°C to 24°C.     

A simulation model of population dynamics of the codling moth, Cydia pomonella

A simulation model has been developed that predicts numbers and phenology of a population of codling moth, Cydia pomonella (L.), in an apple orchard. The model is a general insect population model based on the interative-cohort technique. It operates at two time scales: a fine time scale (1 h) for temperature-dependent physiological processes, and a coarse time scale (1 day) for population processes. The population is divided into a specifiable number of stages, and each stage is described by four process functions, which may be of any convenient mathematical form, and may differ among stages. Each stage is divided into cohorts of individuals born or emerged on the same day, and individuals within a cohort are considered probabilistically identical. The model simulates the processes of development, transition among stages, and mortality by using probability distributions representing these processes, and incorporates the effects of pesticides on mortality of the insect. Model output was evaluated by comparison with records of pheromone trap catches of codling moths in commercial apple orchards in North Carolina. The model predicts timing of the first spring flight well, depending on the initial age distribution used. Time between peaks of numbers of adults in the model is about 15 days longer than the observed period between flight peaks in orchards. Sensitivity analysis indicates that this discrepancy may be related to differences between measured ambient temperature and tree canopy temperature. The sensitivities of numbers of insects produced by the model, and timing of peaks in numbers present were determined for each of the parameters in the model. The parameters with greatest effect on the model output were those which control the locations of developmental rate functions and survival functions on the temperature scale. In the model, pesticides had a much larger effect on numbers of adults present than records of moths caught in pheromone traps indicate actually occurred, suggesting that moths caught in traps in commercial orchards where effective pesticides are applied may be largely immigrants.     

Larval settlement and metamorphosis in the sand crab Emerita talpoida (Crustacea: Decapoda: Anomura)

The effects of various potential cues on the survival and time to metamorphosis of larvae of the sand crab Emerita talpoida (Say) were examined. Zoeal duration, which ranged from 25 to 43 d, was not correlated with subsequent megalopal survival but had a weak, negative correlation with the duration of the megalopal stage. Neither food, sand nor water from containers with adults directly affected megalopal survival or duration. In a second experiment, the presence of sand both increased the probability of survival and shortened the duration of late zoeal stages. This is the first experimental evidence for delayed zoeal metamorphosis in a decapod. Settlement of E. talpoida appears to occur primarily during the zoeal phase, not at the megalopal stage.     

Spatial distribution of bacteria associated with the marine sponge Tethya californiana

Microbial diversity and spatial distribution of the diversity within tissue of the marine sponge Tethya californiana was analyzed based on 16S rRNA gene sequences. One candidate division and nine bacterial phyla were detected, including members of all five subdivisions of Proteobacteria. Moreover, chloroplast-derived Stramenopiles- and Rhodophyta-affiliated 16S rRNA gene sequences were found and Stramenopiles represented the most abundant clones (30%) in the clone library. On the phylum-level, the microbial fingerprint of T. californiana showed a similar pattern as its Mediterranean relative T. aurantium. An interesting difference was that Cyanobacteria that were abundantly present in T. aurantium were not found in T. californiana, but that the latter sponges harbored phototrophic Stramenopiles instead. Surprisingly, the phototrophic microorganisms were evenly distributed over the inner and outer parts of the sponge tissue, which implies that they also reside in regions without direct light exposure. The other phyla were also present in both the outer cortex and the mesohyl of the sponges. These results were confirmed by analysis on the operational taxonomic unit level. This leads to the conclusion that from a qualitative point of view, spatial distribution of microorganisms in T. californiana tissue is quite homogeneous. Thirty-two percent of the operational taxonomic units shared less than 95% similarity with any other known sequence. This indicates that marine sponges are a rich source of previously undetected microbial life.     

Patterns of animal diversity in different forms of tree cover in agricultural landscapes.

As tropical regions are converted to agriculture, conservation of biodiversity will depend not only on the maintenance of protected forest areas, but also on the scope for conservation within the agricultural matrix in which they are embedded. Tree cover typically retained in agricultural landscapes in the neotropics may provide resources and habitats for animals, but little is known about the extent to which it contributes to conservation of animal species. Here, we explore the animal diversity associated with different forms of tree cover for birds, bats, butterflies, and dung beetles in a pastoral landscape in Nicaragua. We measured species richness and abundance of these four animal taxa in riparian and secondary forest, forest fallows, live fences, and pastures with high and low tree cover. We recorded over 20,000 individuals of 189 species including 14 endangered bird species. Mean abundance and species richness of birds and bats, but not dung beetles or butterflies, were significantly different among forms of tree cover. Species richness of bats and birds was positively correlated with tree species richness. While the greatest numbers of bird species were associated with riparian and secondary forest, forest fallows, and pastures with >15% tree cover, the greatest numbers of bat species were found in live fences and riparian forest. Species assemblages of all animal taxa were different among tree cover types, so that maintaining a diversity of forms of tree cover led to conservation of more animal species in the landscape as a whole. Overall, the findings indicate that retaining tree cover within agricultural landscapes can help conserve animal diversity, but that conservation efforts need to target forms of tree cover that conserve the taxa that are of interest locally. Preventing the degradation of remaining forest fragments is a priority, but encouraging farmers to maintain tree cover in pastures and along boundaries may also make an important contribution to animal conservation.