Flow structure and turbulence characteristics downstream of a spanwise suspended linear array

Laboratory experiments are conducted to quantify the mean flow structure and turbulence properties downstream of a spanwise suspended linear array in a uniform ambient water flow using Particle Tracking Velocimetry. Eighteen experimental scenarios, with four depth ratios (array depth to water column depth) of 0.35, 0.52, 0.78, and 0.95 and bulk Reynolds number (length scale is the array depth) from 11,600 to 68,170, are investigated. Three sub-layers form downstream of the array: (1) an internal wake zone, where the time-averaged velocity decreases with increasing distance downstream, (2) a shear layer which increases in vertical extent with increasing distance downstream of the array, and the rate of the increase is independent of the bulk Reynolds number or the depth ratio, and (3) an external wake layer with enhanced velocity under the array. The location of the shear layer is dependent on the depth ratio. The spatially averaged and normalized TKE of the wake has a short production region, followed by a decay region which is comparable to grid turbulence decay and is dependent on the depth ratio. The results suggest that the shear layer increases the transfer of horizontal momentum into the internal wake zone from the fluid outside of the array and that the turbulence in the internal wake zone can be modeled similarly to that of grid turbulence.     

Bibliometric analysis of ecosystem monitoring-related research in Africa: implications for ecological stewardship and scientific collaboration

Regional ecosystem monitoring is a central form of knowledge sharing and collaboration amongst scientists and decision makers on environmental health, land use change, and science-policy development. Despite the proliferation of such research networks on long-term monitoring on many continents, little has been achieved in Africa. This study aims to assess and examine the spatiotemporal trend and categorical patterns in ecosystem monitoring-related research in Africa for the benefits of conserving biodiversity and sustaining natural resource sectors for well-being and livelihood security, environmental planning, and ecological stewardship. A systematic review was conducted using bibliometric tools. Based on a set of search terms and peer-reviewed publications retrieved from various ecosystem monitoring networks and journal databases, further analysis was conducted using social network approaches, mapping tools, and content analysis. About 1442 scientific publications on ecosystem monitoring and related research were documented from 1987 to 2014 mostly published in English. The number of publication increased progressively since 1992 after the Convention on Biodiversity was signed and this trend peaked till 2008. South African Journal of Science was the most leading journal and Nature the most cited. Internationally coauthored and collaborative articles represented majority of the findings with the United Kingdom at the central position in the research network due to colonial relationships. Regional collaboration amongst countries is limited owing to language barriers and other institutional constraints such as funding and short-term projects. These findings have implication for prioritizing national and regional policies toward biodiversity science and its contribution to human well-being, food security, and global change responses.     

Assessment of oxidative and UV-C treatments for inactivating bacterial biofilms from groundwater wells

Microorganisms are ubiquitous in natural environments and in water supply infrastructure including groundwater wells. Sessile-state microorganisms may build up on well surfaces as biofilms and, if excessive, cause biofouling that reduces well productivity and water quality. Conditions can be improved using biocides and other traditional well rehabilitation measures; however, biofilm regrowth is inevitable given the continuous introduction of microorganisms from the surrounding environment. Alternative and less invasive well maintenance approaches are desirable for reducing biofilm densities while also minimizing harmful disinfection-by-products. The primary objective of this research was to evaluate effectiveness of alternative treatments for inactivating microorganisms comprising biofilms. A novel approach was designed for in situ growth of biofilms on steel coupons suspended from ‘chandeliers’. After more than 100 days of in situ growth, biofilms were harvested, sampled, and baseline biofilm densities quantified through cultivation. Ultraviolet-C (UV-C) and oxidative treatments including hydrogen peroxide (H₂O₂), ozone (O₃) and mixed oxidants were then applied to the biofilms in laboratory-scale treatments. Microbial inactivation was assessed by comparing treated versus baseline biofilm densities. H₂O₂ was the most effective treatment, and decreased density below baseline by as much as 3.1 orders of magnitude. Mixed oxidants were effective for the well having a lower density biofilm, decreasing density below baseline by as much as 1.4 orders of magnitude. Disparity in the response to treatment was apparent in the wells despite their spatial proximity and common aquifer source, which suggests that microbiological communities are more heterogeneous than the natural media from which they originate.     

Sclerochronological studies reveal that patterns of otolith growth of adults of two co-occurring species of Platycephalidae are synchronised by water temperature variations

Chronologies are developed from the otolith growth-increment widths of adult rock flathead (Platycephalus laevigatus) and longhead flathead (Leviprora inops) collected from three inter-connected embayments in temperate south-western Australia. Marginal increment trends on otoliths, in combination with the dendrochronological technique of crossdating, provide strong evidence that an opaque zone is formed annually in the otoliths of both species. Increment widths between opaque zones in the otoliths of individuals of P. laevigatus (maximum age 20 years) and L. inops (maximum age 21 years) were synchronised within and between species. The correlation between the two master otolith chronologies, i.e. mean standardised increment width for each year, was highly significant (P < 0.01). The master otolith chronology for each species was positively correlated with mean sea surface temperatures from 1 July to 30 June, which encompassed the austral summer when growth is typically greatest, and with mean monthly sea surface temperature between September and March. Leeuwin Current strength, which influences the biotic characteristics of some marine species on the south coast, has little influence on the pattern of otolith growth, presumably because the inter-connected embayments from which fish were obtained were partially enclosed. On the basis of the above data and the geographical distributions of P. laevigatus and L. inops, it is proposed that, while both species would grow faster with increasing temperature, the temperatures on the south coast are closer to the optimum for the former species.     

Sounds associated with the reproductive behavior of the black grouper (Mycteroperca bonaci)

Passive acoustic and synchronous video recordings were made at two spawning aggregation sites to study the sounds associated with reproductive behaviors of Mycteroperca bonaci. A characteristic sound was produced during courtship displays involving behaviors commonly observed for groupers of this genus at aggregations. The sound has a short pulsing section followed by a longer tonal portion with a mean peak frequency below 100 Hz. Courtship-associated sounds were quantified over one spawning season at Mona Island, Puerto Rico. Most of the daily sound production occurred during a period of 2 h prior to sunset. The highest rates of sound production lasted for a period of 10 days with lunar periodicity over three consecutive months coincident with the reported season of reproduction. Passive acoustics provide a tool to measure the variability of the reproductive activity of M. bonaci over time and may provide a method to evaluate current strategies designed to protect multi-species spawning aggregations that are critical for the recovery of threatened groupers.     

High male reproductive success in a low-density Antarctic fur seal (Arctocephalus gazella) breeding colony

Understanding how population density influences mating systems may lead to important insights into the plasticity of breeding behavior, but few natural systems allow for such studies. Antarctic fur seals (Arctocephalus gazella) provide an interesting model system because they breed in colonies of varying densities. Previous studies have largely focused on a high-density site at Bird Island, South Georgia. Here, 13 highly polymorphic microsatellite loci were used to conduct a genetic analysis of a low-density breeding colony of this species at Livingston Island, approximately 1,600 km south of South Georgia. The majority of adults seen ashore (n?=?54) were sampled together with every pup born (n?=?97) over four consecutive years. Paternities were confidently assigned for 34 out of the 97 pups. Two out of 23 sampled males accounted for the paternity of 28 % of all pups sampled during the study and 82 % of the pups with an assigned father. Moreover, a full likelihood pedigree inference method assigned a further eight paternities to a single unsampled male seal that is inferred to have held a territory during the season before the study began. The most successful males in our study easily surpassed the previous record for the total number of pups sired per male seal for the species. Furthermore, we identified two triads of full siblings implying that their parents remated in three consecutive years. These findings suggest that territorial male fur seals may achieve greater success in monopolizing access to breeding females when population density is relatively low.     

Social learning of predators by coral reef fish: does observer number influence acquisition of information?

Prey that are capable of continuously learning the identity of new predators whilst adjusting the intensity of their responses to match their level of risk, are often at a substantive advantage. Learning about predators can occur through direct experience or through social learning from experienced individuals. Social learning provides individuals with an effective means of acquiring information while reducing the costs associated with direct learning. Under a natural setting, social learning is likely to occur between more than two individuals. As such, investigating the effect that group size has on the ability of individuals to acquire information is vital to understanding social learning dynamics. Given the characteristics of coral reefs and the biology of coral reef fishes, these habitats are an ideal medium to test whether group size affects the transmission of information. Using newly settled damselfish (Pomacentrus amboinensis), we examined whether the number of observers present influences transmission of information. We showed that: (1) predator recognition is socially transmitted from predator-experienced to predator-naïve individuals regardless of group size, and that (2) the level of response displayed by the observer does not differ following learning in different sized groups. Our study highlights that information on predator identities is able to be passed onto group members quickly without a dilution of information content.     

Land or lover? Territorial defence and mutual mate guarding in the crimson-breasted shrike

Crimson-breasted shrikes produce duets which are used in interactions with neighbours and intruders. We examined two major hypotheses explaining duetting, the territorial defence and mate guarding hypotheses, using playback experiments. The responses of 12 pairs towards solo male, solo female and stereo duet playback were analysed using principal component analysis and ANOVA. The measures of response intensity revealed in most cases highly coordinated responses of the pair partners. Although these joint responses could suggest cooperative territorial defence or mutual mate defence, responses to the treatments differed between males and females in terms of three variables. Females increased their answer rates significantly in response to unpaired female intruders, compared to unpaired male intruders. During duet playback, females directed their responses equally at both intruding pair members. In contrast, males were equally responsive towards unpaired male intruders and intruding pairs, but in the latter case directed their responses at the male pair member. In the presence of unpaired female intruders, males increased their solo song rates, but in the presence of intruding pairs, they increased overlapping rates and duetted with their mates. These divergent responses suggest that females use duets for mate guarding against unpaired females, whereas males use solo songs for mate guarding and both solos and duets in territorial defence.     

Demographic parameters of two populations of red coral (Corallium rubrum L. 1758) in the North Western Mediterranean

The demographic and reproductive structure of populations represents the main data set needed for conservation and management plans. Mediterranean red coral Corallium rubrum has been exploited for 2,000 years, but only recently management plans have been solicited by the international community. We examined and compared the demographic features of two red coral shallow populations located in distinct geographic locations: Portofino (Italy) and Cap de Creus (Spain). Adults and juveniles density, growth rates, population size and age structure, fecundity and fertility were examined. Juveniles were the dominant class (33 %) in both populations. The analysis of the gamete content of 653 colonies revealed that the populations have balanced sex ratios and similar fertility and polyp fecundity. The average annual growth rate, determined on 119 colonies by annual growth rings count, was similar in both populations (0.24 mm year^?1), decreasing with colony age. Maximum life span of 99 % of the colonies was 60 and 40 years at Portofino and Cap de Creus, respectively. Minimum harvestable size (7 mm basal diameter) was reached in 30–35 years, and the percentage of colonies above it was 6.7 % at Portofino and 2.1 % at Cap de Creus, where juvenile and adult colony densities were significantly lower and the percentage of commercial-sized colonies reduced by 25 % in just a few years. Notwithstanding similar growth and fecundity, the two populations showed different densities and size/age structures suggesting local factors, together with different fishing pressures, have to be taken into account in the management plans for this species.