In vitro biodegradation of Arabian Light 250 by a marine mixed culture using fertilizers as nitrogen and phosphorous sources

The improved in vitro bioremediation of Arabian Light crude oil in synthetic sea water by a mixed culture of bacteria is reported. Effects of fish meal, meat meal 80 % proteins and sophorolipids on the biodegradation were evaluated during a three-week incubation using GC/FID and GC/MS analysis of the remaining oil. Fish meal and more particularly meat meal 80 % proteins used at 0,5 mg.ml⁻¹ involve no nitrogen and phosphorous limits when used as sole source of nutrients. Biodegradation processes in the first four days of the incubation supplemented with sophrolipids are accelerated two fold over controls.     

Tuna food habits related to the micronekton distribution in French Polynesia

Stomach content analyses are commonly used to study both fish feeding behaviour and trophic conditions. However, the interpretation of such data depends on fish foraging behaviour for a given environment and how representative the stomach contents are to the prey distribution. Tuna feeding behaviour was studied within the context of a research programme conducted in French Polynesia. Tuna prey distribution was characterised using acoustic measurements and pelagic trawls; thereafter, this distribution was compared with the stomach contents of tuna caught using an instrumented longline. Acoustic, pelagic trawling and stomach content analyses give complementary elements to describe the pelagic trophic habitat and to better understand tuna-prey relationships. The classic concept of a reduced food availability for tunas in the tropical pelagic environment seems relative. Tunas able to dive enough during daytime to exploit the migrant micronektonic species secure a source of regular food. This is particularly true of bigeye tuna (Thunnus obesus), which have ecophysiological capacities for this purpose. The behaviour of albacore tuna (T. alalunga), which dive >400 m in depth, remains less clear, as little is known about their vertical behaviour. Lastly, yellowfin tuna (T. albacares), which are distributed in more superficial waters, can better exploit the biomass of juvenile fish and crustaceans exported from the reefs. Analysis of the stomach fullness of tuna caught by longline, a passive gear, generally showed an empty state. This result suggests that most tuna foraging on large prey aggregations present in the study area are quickly satiated and escape longline capture and sampling. A consequence is that studies of tuna feeding behaviour based on longlining may be biased, particularly when large aggregations of prey are present such as in convergence zones. Another potential consequence is that longline tuna catch rates could differ according to prey richness. Longline tuna catch rates may sometimes reflect the relative abundance of prey rather than relative tuna abundance. Electronic supplementary material to this paper can be obtained by using the Springer LINK server located at http://dx.doi.org/10.1007/s00227-001-0776-3.     

Prenatal identification of an isochromosome for the short arm of the Y i(Yp), by cytogenetic and Molecular analyses

A case of 45,X/46,X,+mar mosaicism was detected in a male fetus (27 weeks' gestation) referred for karyotype analysis following the observation of a short femur at the ultrasound scan. Analysis of 12 Y-chromosome loci by fluorescent in situ hybridization (FISH) and polymerase chain reaction (PCR) demonstrated that the marker chromosome is of Y origin and corresponds to an authentic isochromosome for the short arm of the Y chromosome, i(Yp). The breakpoint on this marker is in YQ11·1 close to the centromere. The present report illustrates the importance of FISH and PCR techniques as a complement to cytogenetic methods for accurate identification and characterization of chromosome rearrangements in prenatal diagnosis.     

Semiochemicals mediating host-finding behaviour in the phoretic association between Macrocheles saceri (Acari: Mesostigmata) and Scarabaeus species (Coleoptera: Scarabaeidae)

Summary. Phoresy is an interspecific association where mobile organisms ensure small and/or wingless organisms to colonize patchy distributed environment. Macrocheles saceri (Acari: Mesostigmata) is a phoretic mite which specialized on Scarabaeus dung beetles (Coleoptera: Scarabaeidae). Variation for phoretic load and sites for mite fixation on beetle body has been tested according to Scarabaeus species. The number of setae on beetle body cannot explain the observed patterns in mite fixation. Evidence was provided that the semiochemicals of the host cuticle play a kairomonal role in the host finding behaviour of phoretic mites. In addition semiochemicals ensure host discrimination.     

Influence of n-alkanes and petroleum on fatty acid composition of a hydrocarbonoclastic bacterium: Marinobacter hydrocarbonoclasticus strain 617

This study concerns the effects of various long-chain n-alkanes, n-alkane mixtures and Arabian Light crude oil on the fatty acid (FA) composition of a sedimentary marine bacteria (Marinobacter hydrocarbonoclasticus strain 617), growing under aerobic conditions. The cultures with n-alkanes, as compared with soluble carbon sources, led to greater amounts of saturated and methyl branched FA (mainly belonging to a delta10 series). We observed the appearance or increase of saturated and unsaturated FA with the same carbon chain length (CCL) as the n-alkane carbon source (maximum for n-alkane CCL corresponding to the 'range' of the de novo synthesized fatty acids). We also observed a strong control of the oddness/evenness of the CCL of the FA by the oddness/evenness of the n-alkane. A n-alkane utilization index, (saturated + branched)/monounsaturated fatty acids (SAFA + BFA/MUFA) enabled discriminating between soluble carbon sources and hydrocarbons.     

Groundwater dependent ecosystems. Part I: Hydroecological status and trends

Groundwater dependent ecosystems (GDEs) include valuable ecosystems such as springs, wetlands, rivers, lakes and lagoons. The protection of these systems and services they provide is highlighted by international agreements, i.e. Ramsar convention on wetlands, and regional legislation, i.e. the European Water Framework Directive. Groundwater provides water, nutrients and a relatively stable temperature. However, the role of groundwater in surface ecosystems is not fully understood. The ecosystem can depend on groundwater directly or indirectly, and the reliance can be continuous, seasonal or occasional. This has implications for the vulnerability of ecosystems, as some may be easily affected by external pressure. Conceptual models and quantitative assessments of how groundwater interacts with the environment are needed. GDEs are also threatened by different land use activities and climate change. Hence, we need to understand how GDEs are affected by changes in groundwater quantity and quality, as severe groundwater changes have been observed in many regions. This study examines key aspects of GDEs (hydrogeology, geochemistry and biodiversity) in order to improve conceptual understanding of the role of groundwater in such ecosystems. The status and baseline of different types of GDEs are discussed, with particular emphasis on past evidence of environmental change and potential thresholds and threats in GDEs in various parts of Europe with different land use, climate and geology.     

Groundwater dependent ecosystems. Part II. Ecosystem services and management in Europe under risk of climate change and land use intensification

Groundwater in sufficient amounts and of suitable quality is essential for potable water supplies, crop irrigation and healthy habitats for plant and animal biocenoses. The groundwater resource is currently under severe pressure from land use and pollution and there is evidence of dramatic changes in aquifer resources in Europe and elsewhere, despite numerous policy measures on sustainable use and protection of groundwater. Little is known about how such changes affect groundwater dependent ecosystems (GDEs), which include various aquatic and terrestrial ecosystems above ground and inside the aquifer. Future management must take this uncertainty into account. This paper focuses on multiple aspects of groundwater science, policy and sustainable management. Examples of current management methods and practices are presented for selected aquifers in Europe and an assessment is made of the effectiveness of existing policies such as the European Water Framework Directive and the Habitat Directive in practice and of how groundwaters and GDEs are managed in various conditions. The paper highlights a number of issues that should be considered in an integrated and holistic approach to future management of groundwater and its dependent ecosystems.     

Academic publishing in disaster risk reduction: past,present, and future

Nowadays there are approximately 80 Anglophone journals that deal primarily with disaster risk reduction (DRR) and allied fields. This large array signals a sustained, if uneven, growth in DRR scholarship but also competition between the offerings of different publishers and institutions. The purpose of this article is first to summarise the development of academic publishing on DRR from its early beginnings to the present day. The paper then evaluates the current state of publishing in this field and discusses possible future trends. Next, it identifies some possible opportunities, challenges, expectations, and commitments for journal editors both within DRR and academia more broadly, including those that refer to changes in the use of terminology, the relentless increase in the number of papers submitted, the expansion and dangers of predatory journals, different peer review models, open access versus paywalls, citations and bibliography metrics, academic social networks, and copyright and distribution issues.     

The presence of females modulates the expression of a carotenoid-based sexual signal

Several environmental factors have been shown to shape the pattern of investment of carotenoids into the expression of sexual signals. Surprisingly, the impact of the social environment has been neglected. If a carotenoid-based sexual trait is used by females to choose a mate or by males to assess the quality of potential competitors for mates, males, in the presence of females, should upregulate expression of the trait. We tested this hypothesis in male zebra finches that were housed either with females or in a male-only social environment. Additionally, to investigate whether the social modulation of the expression of a sexual trait depends on the physiological need of carotenoids, we challenged half of the males with Escherichia coli lipopolysaccharide (LPS). We found that the social environment modulated the expression of bill color, with males kept in the presence of females harboring a redder bill at the end of the 3 weeks that the experiment lasted. Males injected with LPS showed duller bill color regardless of the presence of females, and social interactions with females result in upregulated bill color similarly for phosphate-buffered saline (PBS) and LPS males. Thus, social environment and immune activation had an additive effect on the expression of bill color. The effect of social environment on plasma carotenoids was less clear. Indeed, a first replicate of the entire experiment showed that both immune challenge and social context affected bill color, with a negative effect of immune challenge and a positive effect of the presence of females on circulating carotenoids. However, a second replicate of the experiment showed only a negative effect of the immune challenge. These results, therefore, suggest that the social environment can affect the expression of carotenoid-based sexual traits under both benign and carotenoid-demanding conditions. Whatever the signaling function of bill color (female mate choice or male–male competition for mates), the observed flexibility may be adaptive because the expression of the signal can be modulated depending on the expected rewards or costs associated with the presence or absence of females. Nevertheless, the mechanisms underlying such an effect are still unknown.     

Cd-induced phytochelatin synthesis in Dittrichia viscosa (L.) Greuter is determined by the dilution of the culture medium

In this paper, we examined Cd accumulation and PC synthesis in two clones of Dittrichia viscosa, one with a metallicolous (DV-A) and the other with a non-metallicolous origin (DV-W). The clones were cultured in vitro with 0 and 10 mg Cd L^?1 in both short-term treatments (up to 72 h) and over 10 days. We also examined the influence of the culture medium dilution and the PC-synthesis inhibitor, l-buthionine-sulfoximine (BSO), on these parameters. Similar Cd accumulation values were found in the two clones. No synthesis of new thiolic compounds was observed in Cd-treated plants cultured in vitro in Murashige and Skoog medium up to 72 h when compared to controls. Dilution of the culture medium affected PC production, increasing it in 1/2 MS and especially in 1/4 MS. Cd uptake did not increase in the same way, but still hyperaccumulation levels were exceeded in all Cd treatments. BSO addition increased the sensitivity of D. viscosa to Cd and diminished Cd accumulation. Nevertheless, a poor correlation between PCs and Cd accumulation capacity was observed since the highest Cd content did not correspond to the highest PC levels. All these results obtained suggest that PCs are important in Cd accumulation and detoxification in D. viscosa and also that other mechanisms might be involved in these traits.