Benzo[a]pyrene co-metabolism in the presence of plant root extracts and exudates: Implications for phytoremediation

Benzo[a]pyrene, a high molecular weight (HMW) polycyclic aromatic hydrocarbon (PAH) was removed from solution by Sphingomonas yanoikuyae JAR02 while growing on root products as a primary carbon and energy source. Plant root extracts of osage orange (Maclura pomifera), hybrid willow (Salix albaxmatsudana), or kou (Cordia subcordata), or plant root exudates of white mulberry (Morus alba) supported 15-20% benzo[a]pyrene removal over 24 h that was similar to a succinate grown culture and an unfed acetonitrile control. No differences were observed between the different root products tested. Mineralization of (14)C-7-benzo[a]pyrene by S. yanoikuyae JAR02 yielded 0.2 to 0.3% (14)CO(2) when grown with plant root products. Collectively, these observations were consistent with field observations of enhanced phytoremediation of HMW PAH and corroborated the hypothesis that co-metabolism may be a plant/microbe interaction important to rhizoremediation. However, degradation and mineralization was much less for root product-exposed cultures than salicylate-induced cultures, and suggested the rhizosphere may not be an optimal environment for HMW PAH degradation by Sphingomonas yanoikuyae JAR02.     

Probability sampling of stony coral populations in the Florida Keys

Principles of probability survey design were applied to guide large-scale sampling of populations of stony corals and associated benthic taxa in the Florida Keys coral reef ecosystem. The survey employed a two-stage stratified random sampling design that partitioned the 251-km(2) domain by reef habitat types, geographic regions, and management zones. Estimates of the coefficient of variation (ratio of standard error to the mean) for stony coral population density and abundance ranged from 7% to 12% for four of six principal species. These levels of survey precision are among the highest reported for comparable surveys of marine species. Relatively precise estimates were also obtained for octocoral density, sponge frequency of occurrence, and benthic cover of algae and invertebrates. Probabilistic survey design techniques provided a robust framework for estimating population-level metrics and optimizing sampling efficiency.     

Repeated geographic divergence in behavior: a case study employing phenotypic trajectory analyses

Environmental effects on behavior have long been a focus of behavioral ecologists. Among the important drivers of behavior is predation environment, which can include the presence/absence of predators, differences in resource availability, and variation in individual density. Environments with predators are often more ecologically complex and “risky” than those without predators. Populations from these environments are sometimes more active and explorative than populations from low-risk, less complex environments. To date, most comparative studies of behavior are limited to within-species comparisons of populations from divergent environments, but neglect comparisons between species following speciation, thus limiting our understanding of post-speciation behavioral evolution. Brachyrhaphis fishes provide an ideal system for studying correlations between divergent environments and behavior within and between species. Here, we test for differences in two behavioral traits—activity and exploration —between sister species Brachyrhaphis roseni and Brachyrhaphis terrabensis that occur in divergent predation environments. Species differed in activity and exploration, with higher activity and exploration levels in populations that co-occur with predators. Furthermore, we found drainage-by-species interactions, indicating that the nature of divergence varied geographically. Using the recently developed phenotypic trajectory analysis (PTA), we quantified this difference and found that, while the geographically isolated populations of sister species tended to evolve in parallel, the magnitude of divergence between species differed between drainages. Our results highlight the utility of PTA for multivariate behavioral data and corroborate past predictions that complex and risky environments are correlated with increased activity and exploration levels and that divergence continues post-speciation.     

Earliest zygodactyl bird feet: evidence from Early Cretaceous roadrunner-like tracks

Fossil footprints are important in understanding Cretaceous avian diversity because they constitute evidence of paleodiversity and paleoecology that is not always apparent from skeletal remains. Early Cretaceous bird tracks have demonstrated the existence of wading birds in East Asia, but some pedal morphotypes, such as zygodactyly, common in modern and earlier Cenozoic birds (Neornithes) were unknown in the Cretaceous. We, herein, discuss the implications of a recently reported, Early Cretaceous (120–110 million years old) trackway of a large, zygodactyl bird from China that predates skeletal evidence of this foot morphology by at least 50 million years and includes the only known fossil zygodactyl footprints. The tracks demonstrate the existence of a Cretaceous bird not currently represented in the body fossil record that occupied a roadrunner (Geococcyx)-like niche, indicating a previously unknown degree of Cretaceous avian morphological and behavioral diversity that presaged later Cenozoic patterns. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.