Hydrocarbon biodegradation and dynamic laser speckle for detecting chemotactic responses at low bacterial concentration

We report on the biodegradation of pure hydrocarbons and chemotaxis towards these compounds by an isolated chlorophenol degrader,Pseudomonas strain H.The biochemical and phylogenetic analysis of the 16S rDNA sequence identified Pseudomonas strain H as having 99.56% similarity with P.aeruginosa PA01.This strain was able to degrade n-hexadecane,1-undecene,1-nonene,1-decene,1-dodecene and kerosene.It grew in the presence of 1-octene,while this hydrocarbons is toxic to other hydrocarbons degraders.Pseudomonas strain H was also chemotactic towards n-hexadecane,kerosene,1-undecene and 1-dodecene.These results show that this Pseudomonas strain H is an attractive candidate for hydrocarbon-containing wastewater bioremediation in controlled environments.Since the classical standard techniques for detecting chemotaxis are not efficient at low bacterial concentrations,we demonstrate the use of the dynamic speckle laser method,which is simple and inexpensive,to confirm bacterial chemotaxis at low cell concentrations (less than 105 colony-forming unit per millilitre (CFU/mL)) when hydrocarbons are the attractants.     

Associated skeletons of a new middle Triassic "Rauisuchia" from Brazil

For more than 30 million years, in early Mesozoic Pangea, ??rauisuchian?? archosaurs were the apex predators in most terrestrial ecosystems, but their biology and evolutionary history remain poorly understood. We describe a new ??rauisuchian?? based on ten individuals found in a single locality from the Middle Triassic (Ladinian) Santa Maria Formation of southern Brazil. Nine articulated and associated skeletons were discovered, three of which have nearly complete skulls. Along with sedimentological and taphonomic data, this suggests that those highly successful predators exhibited some kind of intraspecific interaction. Other monotaxic assemblages of Triassic archosaurs are Late Triassic (Norian-Rhaetian) in age, approximately 10 million years younger than the material described here. Indeed, the studied assemblage may represent the earliest evidence of gregariousness among archosaurs, adding to our knowledge on the origin of a behavior pattern typical of extant taxa.     

Sugarcane vinasse: Environmental implications of its use

The inadequate and indiscriminate disposal of sugarcane vinasse in soils and water bodies has received much attention since decades ago, due to environmental problems associated to this practice. Vinasse is the final by-product of the biomass distillation, mainly for the production of ethanol, from sugar crops (beet and sugarcane), starch crops (corn, wheat, rice, and cassava), or cellulosic material (harvesting crop residues, sugarcane bagasse, and wood). Because of the large quantities of vinasse produced, alternative treatments and uses have been developed, such as recycling of vinasse in fermentation, fertirrigation, concentration by evaporation, and yeast and energy production. This review was aimed at examining the available data on the subject as a contribution to update the information on sugarcane vinasse, from its characteristics and chemical composition to alternatives uses in Brazil: fertirrigation, concentration by evaporation, energy production; the effects on soil physical, chemical and biological properties; its influence on seed germination, its use as biostimulant and environmental contaminant. The low pH, electric conductivity, and chemical elements present in sugarcane vinasse may cause changes in the chemical and physical–chemical properties of soils, rivers, and lakes with frequent discharges over a long period of time, and also have adverse effects on agricultural soils and biota in general. Thus, new studies and green methods need to be developed aiming at sugarcane vinasse recycling and disposal.     

Canada shows the way

Editorial

Canada shows the way     

Renewable energies in electricity generation for reduction of greenhouse gases in Mexico 2025

This study presents 4 scenarios relating to the environmental futures of electricity generation in Mexico up to the year 2025. The first scenario emphasizes the use of oil products, particularly fuel oil, and represents the historic path of Mexico's energy policy. The second scenario prioritizes the use of natural gas, reflecting the energy consumption pattern that arose in the mid-1990s as a result of reforms in the energy sector. In the third scenario, the high participation of renewable sources of energy is considered feasible from a technical and economic point of view. The fourth scenario takes into account the present- and medium-term use of natural-gas technologies that the energy reform has produced, but after 2007 a high and feasible participation of renewable sources of energy is considered. The 4 scenarios are evaluated up to the year 2025 in terms of greenhouse gases (GHG) and acid rain precursor gases (ARPG).     

Degradation of Polylactic Acid (PLA) Plastic in Costa Rican Soil and Iowa State University Compost Rows

In this study the degradation of polylactic acid (PLA) plastic films in Costa Rican soil and in a leaf composting environment was investigated. Three types of PLA films were used: Ch-I, (PLA monolayer plastic films from Chronopol, Golden, CO), GII (PLA trilayer plastic films from Cargill Dow Polymers LLC, Minnetonka, MN), and Ca-I (PLA monolayer plastic films from Cargill Dow Polymers LLC). The average soil temperature and moisture content in Costa Rica were 27°C and 80%, respectively. The average degradation rate of PLA plastic films in the soil of the banana field was 7675 M _w/week. Two compost rows were set up at the Iowa State University (ISU) (Ames) compost site. Temperature and relative humidity of the compost rows were kept at 55 ± 5°C and 50 ± 10% RH, respectively. The degradation rates of GII and Ca-I in the compost rows were 113,290 and 71,283 M _w/week, respectively. Therefore, it was estimated that in Costa Rican soil and in compost rows, PLA would be visibly degraded in 6 months and in 3 weeks, respectively.     

Some Dependence Models for the Time Between Ozone Exceedances in Mexico City

In this paper, we consider several modelling approaches for the mean time between exceedances of a given environmental threshold. The interest here resides in the time between ozone exceedances (also called ozone inter-exceedances times). The proposed models assume two basic density functions for the time between surpassings: the Weibull and the generalised exponential functions. Considering those distributions, a random effect with autoregressive structure is taken into account to determine unexpected changes in the mean of the inter-exceedances density functions. Those unexpected changes could be captured either by their scale parameter or by both their scale and shape parameters. The models are applied to ozone data from the monitoring network of Mexico City. Selection of the model that best explains the data is performed using the deviance information criterion and also the sum of the absolute values of the differences between the estimated and observed means of the inter-exceedances times. An analysis to detect the possible presence of change-points is also presented.     

Rethinking receiver operating characteristic analysis applications in ecological niche modeling

The area under the curve (AUC) of the receiver operating characteristic (ROC) has become a dominant tool in evaluating the accuracy of models predicting distributions of species. ROC has the advantage of being threshold-independent, and as such does not require decisions regarding thresholds of what constitutes a prediction of presence versus a prediction of absence. However, we show that, comparing two ROCs, using the AUC systematically undervalues models that do not provide predictions across the entire spectrum of proportional areas in the study area. Current ROC approaches in ecological niche modeling applications are also inappropriate because the two error components are weighted equally. We recommend a modification of ROC that remedies these problems, using partial-area ROC approaches to provide a firmer foundation for evaluation of predictions from ecological niche models. A worked example demonstrates that models that are evaluated favorably by traditional ROC AUCs are not necessarily the best when niche modeling considerations are incorporated into the design of the test.