Habitat,movements and environmental preferences of dusky sharks,Carcharhinus obscurus,in the northern Gulf of Mexico

The dusky shark (Carcharhinus obscurus) is the largest member of the genus Carcharhinus and inhabits coastal and pelagic ecosystems circumglobally in temperate, subtropical and tropical marine waters. In the western North Atlantic Ocean (WNA), dusky sharks are overfished and considered vulnerable by the International Union for the Conservation of Nature. As a result, retention of dusky sharks in commercial and recreational fisheries off the east coast of the United States (US) and in the northern Gulf of Mexico is prohibited. Despite the concerns regarding the status of dusky sharks in the WNA, little is known about their habitat utilization. During the summers of 2008–2009, pop-up satellite archival tags were attached to ten dusky sharks (one male, nine females) at a location where they have been observed to aggregate in the north central Gulf of Mexico southwest of the Mississippi River Delta to examine their movement patterns and habitat utilization. All tags successfully transmitted data with deployment durations ranging from 6 to 124 days. Tag data revealed shark movements in excess of 200 km from initial tagging locations, with sharks primarily utilizing offshore waters associated with the continental shelf edge from Desoto Canyon to the Texas/Mexican border. While most sharks remained in US waters, one individual moved from the northern Gulf of Mexico into the Bay of Campeche off the coast of Mexico. Sharks spent 87 % of their time between 20 and 125 m and 83 % of their time in waters between 23 and 30 °C. Since dusky sharks are among the most vulnerable shark species to fishing mortality, there is a recovery plan in place for US waters; however, since they have been shown to make long-distance migrations, a multi-national management plan within the WNA may be needed to ensure the successful recovery of this population.     

High male reproductive success in a low-density Antarctic fur seal (Arctocephalus gazella) breeding colony

Understanding how population density influences mating systems may lead to important insights into the plasticity of breeding behavior, but few natural systems allow for such studies. Antarctic fur seals (Arctocephalus gazella) provide an interesting model system because they breed in colonies of varying densities. Previous studies have largely focused on a high-density site at Bird Island, South Georgia. Here, 13 highly polymorphic microsatellite loci were used to conduct a genetic analysis of a low-density breeding colony of this species at Livingston Island, approximately 1,600 km south of South Georgia. The majority of adults seen ashore (n?=?54) were sampled together with every pup born (n?=?97) over four consecutive years. Paternities were confidently assigned for 34 out of the 97 pups. Two out of 23 sampled males accounted for the paternity of 28 % of all pups sampled during the study and 82 % of the pups with an assigned father. Moreover, a full likelihood pedigree inference method assigned a further eight paternities to a single unsampled male seal that is inferred to have held a territory during the season before the study began. The most successful males in our study easily surpassed the previous record for the total number of pups sired per male seal for the species. Furthermore, we identified two triads of full siblings implying that their parents remated in three consecutive years. These findings suggest that territorial male fur seals may achieve greater success in monopolizing access to breeding females when population density is relatively low.     

Model selection criteria for overdispersed data and their application to the characterization of a host-parasite relationship

In the statistical modeling of a biological or ecological phenomenon, selecting an optimal model among a collection of candidates is a critical issue. To identify an optimal candidate model, a number of model selection criteria have been developed and investigated based on estimating Kullback’s (Information theory and statistics. Dover, Mineola, 1968) directed or symmetric divergence. Criteria that target the directed divergence include the Akaike (2nd international symposium on information theory. Akadémia Kiadó, Budapest, Hungary, pp 267–281, 1973, IEEE Trans Autom Control AC 19:716–723, 1974) information criterion, AIC, and the “corrected” Akaike information criterion (Hurvich and Tsai in Biometrika 76:297–307, 1989), AICc; criteria that target the symmetric divergence include the Kullback information criterion, KIC, and the “corrected” Kullback information criterion, KICc (Cavanaugh in Stat Probab Lett 42:333–343, 1999; Aust N Z J Stat 46:257–274, 2004). For overdispersed count data, simple modifications of AIC and AICc have been increasingly utilized: specifically, the quasi Akaike information criterion, QAIC, and its corrected version, QAICc (Lebreton et al. in Ecol Monogr 62(1):67–118 1992). In this paper, we propose analogues of QAIC and QAICc based on estimating the symmetric as opposed to the directed divergence: QKIC and QKICc. We evaluate the selection performance of AIC, AICc, QAIC, QAICc, KIC, KICc, QKIC, and QKICc in a simulation study, and illustrate their practical utility in an ecological application. In our application, we use the criteria to formulate statistical models of the tick (Dermacentor variabilis) load on a white-footed mouse (Peromyscus leucopus) in northern Missouri.     

Numerical modelling of horizontal sediment-laden jets

Sediment-laden turbulent flows are commonly encountered in natural and engineered environments. It is well known that turbulence generates fluctuations to the particle motion, resulting in modulation of the particle settling velocity. A novel stochastic particle tracking model is developed to predict the particle settling out and deposition from a sediment-laden jet. Particle velocity fluctuations in the jet flow are modelled from a Lagrangian velocity autocorrelation function that incorporates the physical mechanism leading to a reduction of settling velocity. The model is first applied to study the settling velocity modulation in a homogeneous turbulence field. Consistent with basic experiments using grid-generated turbulence and computational fluid dynamics (CFD) calculations, the model predicts that the apparent settling velocity can be reduced by as much as 30 % of the stillwater settling velocity. Using analytical solution for the jet mean flow and semi-empirical RMS turbulent velocity fluctuation and dissipation rate profiles derived from CFD predictions, model predictions of the sediment deposition and cross-sectional concentration profiles of horizontal sediment-laden jets are in excellent agreement with data. Unlike CFD calculations of sediment fall out and deposition from a jet flow, the present method does not require any a priori adjustment of particle settling velocity.     

Effect of curacron toxicity on the total serum protein content of Cyprinus carpio

An experiment was conducted on freshwater fish Cyprinus carpio to study the effect of the pesticide curacron on total serum protein. Curacron is an organophosphate pesticide and used by the farmers to protect their crops. This pesticide reaches the aquatic ecosystem by direct or indirect means and affects aquatic fauna. LC50 for curacron for C. carpio was calculated by the log-dose/probit regression line method and found to be 0.38?ppm at 96?h. Three sub-lethal concentrations (0.1, 0.01, and 0.001?mL?L^?1) were selected to expose the fish for 1, 7, 14, and 21days. Changes in total serum protein were observed at all pesticide concentrations and exposure periods. Total serum protein was decreased from control. At 1 and 7 days, the decrease was quantitative at all concentrations, while at 14 and 21 days, the fall was significant at all concentrations. Hence, human population may be at risk by consuming these contaminated fish.     

Possible health impacts of naturally occurring uptake of aristolochic acids by maize and cucumber roots: links to the etiology of endemic (Balkan) nephropathy

Aristolochic acids (AAs) are nephrotoxic and carcinogenic derivatives found in several Aristolochia species. To date, the toxicity of AAs has been inferred only from the effects observed in patients suffering from a kidney disease called “aristolochic acid nephropathy” (AAN, formerly known as “Chinese herbs nephropathy”). More recently, the chronic poisoning with Aristolochia seeds has been considered to be the main cause of Balkan endemic nephropathy, another form of chronic renal failure resembling AAN. So far, it was assumed that AAs can enter the human food chain only through ethnobotanical use (intentional or accidental) of herbs containing self-produced AAs. We hypothesized that the roots of some crops growing in fields where Aristolochia species grew over several seasons may take up certain amounts of AAs from the soil, and thus become a secondary source of food poisoning. To verify this possibility, maize plant (Zea mays) and cucumber (Cucumis sativus) were used as a model to substantiate the possible significance of naturally occurring AAs’ root uptake in food chain contamination. This study showed that the roots of maize plant and cucumber are capable of absorbing AAs from nutrient solution, consequently producing strong peaks on ultraviolet HPLC chromatograms of plant extracts. This uptake resulted in even higher concentrations of AAs in the roots compared to the nutrient solutions. To further validate the measurement of AA content in the root material, we also measured their concentrations in nutrient solutions before and after the plant treatment. Decreased concentrations of both AAI and AAII were found in nutrient solutions after plant growth. During this short-term experiment, there were much lower concentrations of AAs in the leaves than in the roots. The question is whether these plants are capable of transferring significant amounts of AAs from the roots into edible parts of the plant during prolonged experiments.     

Recreational diving impacts and the use of pre-dive briefings as a management strategy on Florida coral reefs

Ecotourism often is promoted as an ecologically sustainable activity, but some ecotourism activities negatively impact coastal ecosystems. Impacts of intensive diving tourism on coral reefs remain poorly understood, especially in the Florida Keys. We determined patterns of recreational dive frequency, diver behaviour, and coral damage on reefs near Key Largo, and assessed how pre-dive briefings and other factors affect these damage rates. Recreational divers contacted live stony corals ~ 18 times per scuba dive; most contacts deposited sediment onto corals, but also caused abrasion to coral tissues and fracture of coral skeletons. Divers who received pre-dive ecological briefings caused significantly less coral damage than those who did not, and divers with cameras and/or gloves caused the most damage. The proportion of damaged corals increased significantly with the estimated rate of recreational diving on each reef, and the percent cover of live corals decreased. We conclude that current rates of recreational diving in Key Largo are unsustainable, resulting in damage to >80 % of coral colonies and reduction of live coral cover to <11 % at heavily-dived sites. We recommend that dive tour operators administer pre-dive ecological briefings to all recreational divers, provide extra briefings to camera and glove users, and employ underwater dive guides who intervene when divers inadvertently damage live stony corals. This study provides a scientific basis to support management of intensive ecotourism on Florida coral reefs.     

Ecological drivers of group living in two populations of the communally rearing rodent, Octodon degus

Intraspecific variation in sociality is thought to reflect a trade-off between current fitness benefits and costs that emerge from individuals' decision to join or leave groups. Since those benefits and costs may be influenced by ecological conditions, ecological variation remains a major, ultimate cause of intraspecific variation in sociality. Intraspecific comparisons of mammalian sociality across populations facing different environmental conditions have not provided a consistent relationship between ecological variation and group-living. Thus, we studied two populations of the communally rearing rodent Octodon degus to determine how co-variation between sociality and ecology supports alternative ecological causes of group living. In particular, we examined how variables linked to predation risk, thermal conditions, burrowing costs, and food availability predicted temporal and population variation in sociality. Our study revealed population and temporal variation in total group size and group composition that covaried with population and yearly differences in ecology. In particular, predation risk and burrowing costs are supported as drivers of this social variation in degus. Thermal differences, food quantity and quality were not significant predictors of social group size. In contrast to between populations, social variation within populations was largely uncoupled from ecological differences.     

Assessment of the aquatic biodiversity of a threatened coastal lagoon at Bimini, Bahamas

Coastal biodiversity is threatened worldwide by both direct and indirect anthropogenic activities. To more effectively manage and protect coastal biodiversity, accurate assessments of genetic, species, and ecosystem level diversity are required. We present the results from an assessment of the aquatic species diversity of a small (3?km²), shallow, mangrove-fringed Bahamian lagoon (the North Sound) subject to ongoing anthropogenic development. The assessment was conducted through a collation of field observations and data in published literature. We found that eight angiosperm species, 30 macroalgal species, and 370 animal species (including 95 fishes, 69 arthropods, 56 birds, and 45 mollusks) were documented within the lagoon. At least 11 of these species are of conservation concern, such as the critically endangered smalltooth sawfish (Pristis pectinata) and hawksbill turtle (Eretmochelys imbricata). Comparisons of community similarity indicated that the North Sound has a relatively distinct fauna and flora, but available data suggest that the species found there are most similar to those found in nearby habitats in Cuba. The lagoon forms a key nursery habitat for many species, including lemon sharks (Negaprion brevirostris), Caribbean spiny lobsters (Panulirus argus), and queen conch (Strombas gigas). Recently, the lagoon was included as part of a new marine protected area (MPA), but much of the habitat has already experienced considerable anthropogenic disturbance and the MPA boundaries have yet to be established. We have therefore analyzed the lagoon biodiversity and expect the data presented here to serve as a baseline for future comparisons.     

Seasonal distribution patterns of juvenile loggerhead sea turtles (<Emphasis Type="Italic">Caretta caretta</Emphasis>) following capture from a shipping channel in the Northwest Atlantic Ocean

Thirty-four juvenile loggerhead sea turtles captured by trawling from the Charleston, South Carolina (USA), shipping channel (32°42′N; −79°47′W) between May 2004 and August 2007 were tagged with satellite transmitters to assess the extent to which they remained near the capture location given their collection along a seasonal migratory corridor. Seventy-five percent of juveniles were classified as seasonal residents. Migrants predominantly swam north in the spring and nomads wandered south in the summer, but predictive indicators for non-resident status were not identified. All but one juvenile generally remained south of 34°N, within 40 km of shore, and in waters <30 m deep throughout the year. Nine of 14 loggerhead sea turtles monitored during the winter remained exclusively over the continental shelf, three briefly occurred in oceanic habitats, and two foraged extensively in oceanic habitats. Residents distributed >15 km from shore between spring and autumn were three times as likely to occur in oceanic habitats in winter. Modest seasonal movements contrasted with adults tagged at similar latitudes and with juveniles tagged further north and suggest distinct foraging groups within a regional foraging ground.