Enhancement of aerobic biodegradation in an oxygen-limiting environment using a saponin-based microbubble suspension

This study investigated the ability of a saponin-based microbubble suspension to enhance aerobic biodegradation of phenanthrene by subsurface delivery. As the microbubble suspension flowed through a sand column pressure buildup and release was repeatedly observed, which delivered oxygen to the less permeable regions. Burkholderia cepacia RPH1, a phenanthrene-degrading bacterium, was mainly transported in a suspended form in the microbubble suspension. When three pore volumes of the microbubble suspension containing B. cepacia RPH1 was introduced into a column contaminated with phenanthrene (100 mg/kg), the oxygen content declined to 5% from an initial value of 20% within 5 days and correspondingly, 34.4% of initial phenanthrene was removed in 8 days. The addition of two further three pore volumes enhanced the biodegradation efficiency by a factor of 2.2. Our data suggest that a saponin-based microbubble suspension could be a potential carrier for enhancing the aerobic biodegradation under an oxygen-limiting environment.     

Removal of arsenic from aqueous solution by two types of nano TiO2 crystals

Titanium dioxide (TiO₂) is a promising sorbent for As removal. There are two main and physico-chemically distinct polymorphs of TiO₂ in nature, namely anatase and rutile. Since the difference of arsenic removal by the two polymorphs of TiO₂ is now well known, study on the arsenic removal efficiency and the underlying mechanism is of great significance in developing new remediation strategies for As-polluted waters. Here batch experiments were carried out in combination with instrumental analysis of X-ray diffraction (XRD), Fourier-transform infrared spectroscopy (FT-IR), and X-ray photoelectron spectroscopy (XPS) to investigate the effects, influential factors and mechanisms of As removal from aqueous solution by two types of nano TiO₂ crystals. The adsorption behavior of anatase and rutile for As(V) and As(III) are well described by Freundlich equations. Anatase had higher As removal efficiency and adsorption capacity than rutile. Solution pH had no influence on the As adsorption of anatase TiO₂, whereas the As removal by rutile TiO₂ was increased by 7?C18% with pH from 4 to 10. Presence of accompanying anions such as phosphate, silicate, nitrate and sulfate, decreased the As(V) and As(III) removal by both crystals, with phosphate being the most effective. However, removal of As by rutile TiO₂ was greatly enhanced in the presence of divalent cations i.e. Ca²⁺ and Mg²⁺. Shading of light decreased the removal of As(V) and As(III) of anatase by 15.5% and 17.5%, respectively, while a slight increase of As removal was observed in the case of Rutile TiO₂. FT-IR characterization of As(V) or As(III)-treated nano TiO₂ crystals indicated that both Ti-O and As-O groups participated in As adsorption. Both FT-IR and XPS analysis demonstrated that As(III) was photooxidated into As(V) when adsorbed by anatase under the light condition. Thus, the effect of crystal types and light condition on As removal should be taken into consideration when nano TiO₂ is applied for As removal from water.     

Morphological characteristics of waste polyethylene/polypropylene plastics during pyrolysis and representative morphological signal characterizing pyrolysis stages

In this work, the morphological characteristics of waste polyethylene (PE)/polypropylene (PP) plastics during their pyrolysis process were investigated, and based on their basic image changing patterns representative morphological signals describing the pyrolysis stages were obtained. PE and PP granules and films were used as typical plastics for testing, and influence of impurities was also investigated. During pyrolysis experiments, photographs of the testing samples were taken sequentially with a high-speed infrared camera, and the quantitative parameters that describe the morphological characteristics of these photographs were explored using the “Image Pro Plus (v6.3)” digital image processing software. The experimental results showed that plastics pyrolysis involved four stages: melting, two stages of decomposition which are characterized with bubble formation caused by volatile evaporating, and ash deposition; and each stage was characterized with its own phase changing behaviors and morphological features. Two stages of decomposition are the key step of pyrolysis since they took up half or more of the reaction time; melting step consumed another half of reaction time in experiments when raw materials were heated up from ambient temperatures; and coke-like deposition appeared as a result of decomposition completion. Two morphological signals defined from digital image processing, namely, pixel area of the interested reaction region and bubble ratio (BR) caused by volatile evaporating were found to change regularly with pyrolysis stages. In particular, for all experimental scenarios with plastics films and granules, the BR curves always exhibited a slowly drop as melting started and then a sharp increase followed by a deep decrease corresponding to the first stage of intense decomposition, afterwards a second increase – drop section corresponding to the second stage of decomposition appeared. As ash deposition happened, the BR dropped to zero or very low values. When impurities were involved, the shape of BR curves showed that intense decomposition started earlier but morphological characteristics remained the same. In addition, compared to parameters such as pressure, the BR reflects reaction stages better and its change with pyrolysis process of PE/PP plastics with or without impurities was more intrinsically process correlated; therefore it can be adopted as a signal for pyrolysis process characterization, as well as offering guide to process improvement and reactor design.     

汶川地震灾区小流域洪水计算方法初探

汶川地震灾区小流域山洪不仅造成巨大损失,同时也是泥石流等灾害的激发因素,探寻一种准确且可操作的洪水峰值流量计算方法对防灾减灾具有重要意义。本文选择不同产流和汇流计算方法,组合成不同水文模型,进行小流域洪水过程计算,对模拟结果和参数选择进行对比,旨在探究最适合该地区的小流域水文计算方法。分别选择SCS曲线法、Green-Ampt入渗法、初损稳渗法进行坡面产流计算,应用SCS单位线法、Snyder单位线法和运动波方程进行坡面和沟道汇流计算,组合成5种小流域产汇流计算模型,利用6场洪水进行参数率定和结果验证。模拟结果对比分析,得出SCS曲线法是最适宜的产流模型,其与SCS单位线、运动波汇流计算方法组合而成的SCS和SKK模型,峰现时间的模拟误差最小,在0~25 min之间;洪峰流量模拟的相对误差较小,平均误差不超过4%;洪水总量模拟误差在10%左右。另外,这两种模型参数设置及确定较简单,更适合在数据稀缺的小流域中进行洪水模拟应用。研究可为汶川地震灾区小流域山洪和泥石流等灾害的流量估算提供方法和参数借鉴。     

Effect of ultra-micro powder Dendrobium officinale on the molecular diversity of intestinal bacteria in mice with spleen-deficiency constipation北大核心CSCD

This research aimed to study the effect of ultra-micro powder Dendrobium officinale on the molecular diversity of intestinal bacteria in mice with spleen-deficiency constipation, in order to provide scientific basis for ultra-micro D. officinale therapy. The mice with spleen-deficiency constipation in treatment groups were respectively given the traditional decoction of D. officinale and 50% dose ultra-micro powder D. officinale. The metagenome DNA of intestinal flora was extracted from intestinal contents. Then ARDRA analysis was made after PCR by universal primer of bacteria. The results showed that OTUs, Shannon index and Brillouin index were the same between the normal group and the 50% dose ultra-micro powder group, and between the model group and the traditional decoction group, but greater in the former two groups than the latter ones. The similarity coefficient (0.500 0) was bigger between the 50% dose ultra-micro powder group and the normal group than between the model group and the traditional decoction group, which was 0.181 8. Both cluster analysis and principal components analysis showed that the molecular diversity of intestinal microbiotia in mice of 50% dose ultra-micro powder group was the closest to that in the normal group. The results showed that the weakened molecular diversity of intestinal bacteria in mice with spleen-deficiency constipation can be regulated by the two kinds of D. officinale treatments to different extent. The efficacy of 50% dose ultra-micro powder D. officinale is better than the traditional decoction.     

Cloning and expression analysis of ScBAK1 gene and its alternative spliceosome in sugarcane北大核心CSCD

Alternative splicing (AS) is an important part of regulation of eukaryotic gene expression. BAK1 (Brassinosteroid insensitive1-associated receptor kinase 1) is a specific type of plant serine/threonine protein kinases, and can regulate growth and development and natural immunization. To reveal the responses of sugarcane BAK1 gene to the adverse environment, a ScBAK1 gene and its alternative spliceosome, termed ScBAK1 (GenBank accession number: KP032226) and ScBAK1 S1 (GenBank accession number: KP032227), were cloned from leaf cDNA of Yacheng 05-179 utilizing the methods of electronic cloning and RT-PCR. The open reading frame (ORF) length of ScBAK1/ScBAK1 S1 gene was 1 860bp/1 770bp, encoding 619/589 amino acids residues. The predicted molecular weight of the protein was 69.28 kDa/ 65.76 kDa. Both proteins were located in plasma membrane, estimated as acid, hydrophikic and secretive proteins. Random coil and alpha helix gave priority to extended strand in their secondary structure without beta turn. The most important protein function was cell envelope, secondly biosynthesis of amino acids and cofactors. Real-time quantitative PCR analysis revealed that the expression of sugarcane ScBAK1 S1 gene exhibited the reduced expression trend under smut fungus stress and various abiotic exogenous stresses, including SA, CuCl2, PEG, ABA, NaCl and JA, while the expression of ScBAK1 gene was induced by SA, CuCl2, PEG, NaCl and smut fungus stresses. The phenomenon showed that the absent sequences or amounts of ScBAK1 S1 gene plays a key role in the response of ScBAK1 to the stress of sugarcane smut fungus, osmotic stress and cell growth. The differential expression of ScBAK1 and ScBAK1 S1 lays a foundation for further research on the function of ScBAK1 gene under biotic and abiotic stress.     

Toxicity evaluation of 10 oil gelling agents北大核心CSCD

Oil gelling agents are widely used in emergency response of marine oil spills. However, the biological toxicity of oil gelling agents is not well understood. This research aimed to evaluate the environmental safety of oil gelling agents used for rapid removal and cleanup of marine oil spills. We used luminescent bacteria (Acinetobacter sp. Tox2 and Acinetobacter sp. RecA) combined with exposure experiment using marine medaka (Oryzias melastigma) juveniles to detect the acute toxicity and genotoxicity of 10 oil gelling agents. As a result, a certain level of acute toxicity was detected from the oil gelling agent FOA and GMN-01 (the toxicity equivalent to 0.067 mg/L and 0.084 mg/L of HgCl2, respectively), and a certain level of genotoxicity was detected from the oil gelling agent NORSOREX (the toxicity equivalent to 0.307 mg/L of MMC) by the luminescent bacteria test. However, no obvious acute toxicity or genotoxicity was detected from the above three oil gelling agents in fish-exposure experiments. Our results suggest that the 10 oil gelling agents have no obvious acute toxicity or genotoxicity to higher organisms (including marine medaka). The luminescent bacteria test is more sensitive in detecting biological toxicity of oil gelling agents. This study provides a reference for environmental safety evaluation of the oil gelling agents used in the cleaning up of the marine oil spills.     

Review on the study of mercury/silver ions-pyrimidine base pairs in DNA duplexes and their application in detection technology北大核心CSCD

Nucleic acids and their analogues are getting more and more attention. Metal-mediated base pairs as a kind of simple and functionalized nucleic acids in special positions have widened the scope of application of functional nucleic acids and their analogues. In this type of base pairs, the representative is the interaction between metal ions and pyrimidine bases, especially the research on thymine-Hg2+-thymine (T-Hg2+-T) and cytosine-Ag+-cytosine (C-Ag+-C) base pairs. This review summarizes the structure and mechanism of metal-mediate pyrimidine base pairs as well as the application in the biochemical analysis. It explores the mode and ratio of coordination between metal ions and base pairs, the effects on the stability of DNA helical structure, the related crystal structure and the three-dimensional configuration information in the DNA helix. The analytical application mainly includes various probes of metal ions, small molecules, protein and the detection of single nucleotide polymorphism. Among them the most widely used metal ions detection, and its combination with spectrum technology, visualization and amplification technology greatly promoted the rapid development of sensitive detection technology. In further studies, it is necessary to reveal the mechanism of interaction between T-Hg2+-T and C-Ag+-C, and more attention should be paid to combining of T-Hg2+-T and C-Ag+-C base pairs with other new technologies. The scope of practical application should also be further extended.     

Characterization and catabolic genes detection of three oil-degrading Rhodococcus spp.北大核心CSCD

Oil pollution is one of the major factors causing environmental deterioration. Bioremediation of oil contaminated environments by microorganisms attracts much research attention. This study aimed to screen efficient oil-degrading bacteria from oil contaminated soil and analyze their characteristics and catabolic genes. Oil-degrading bacteria were screened from oil contaminated soil in minimal medium containing crude oil and identified by morphological, physiological and biochemical characteristics and 16S rDNA sequence analysis. Their growth and degradation characteristics were studied with ultraviolet spectroscopy and GC-MS analysis. The surfactant production was studied by adopting culture method. The major oil-degrading related genes were detected by t he PCR a mplification. As a result, t hree oil-degrading bacteria strains named KB1, 2182 and JC3-47 were isolated from the oil contaminated soil samples. The strains could use crude oil as the sole carbon source to degrade oil with a degrading rate of 41.02%, 32.26% and 55.90%, respectively, when cultured in minimal medium containing crude oil for 3 days. The bacteria were identified to belong to genus Rhodococcus. With 100% similarity of 16S rDNA sequences of the three strains with known ones of Rhodococcus, KB1 was preliminarily identified as Rhodococcus erythropolis, 2182 as Rhodococcus equi, and JC3-47 as Rhodococcus qingshengii. They grew well at 10-50 °C, with the initial pH of 3-9 and the NaCl concentration of 0-5%. The optimal temperature for bacterial growth was 35 °C, 35 °C and 30 °C respectively. KB1 and 2182 could grow at pH 2 and 9.0% of NaCl. The bacteria grew well in broth containing different organic substrates as sole carbon source, such as n-dodecane, n-octadecane, benzene, methylbenzene, xylene and naphthaline. KB1 and JC3-47 could grow well in broth containing pyrene. GC-MS analysis revealed that the bacteria could effectively degrade medium- and long-chain alkane components in crude oil. The bacteria produced biosurfactants and decreased the surface tension of the culture broth. They also showed adhesion activities to n-hexadecane. The oil-degrading related genes such as alkane monooxygenase, aromatic-ring-hydroxylating dioxygenase and catechol dioxygenase genes were detected in all the three strains. Besides, biphenyl dioxygenase genes were detected in KB1 and 2182. The isolated Rhodococcus spp. strains could effectively degrade petroleum hydrocarbons with high adaptabilities to extreme environments such as high salt and low temperature. They are supposed to be applied broadly in the bioremediation of oil contaminated soil in such environments.     

Nitrogen to phosphorus ratios of two understory plant species in response to nitrogen and phosphorus addition in tropical forest of southern China北大核心CSCD

The secondary tropical forests in southern China have suffered from frequent human disturbance and increasing high N deposition. In order to explore the nutrient limitation status in secondary tropical forests of South China, this 3-year field experiment of nitrogen (+N) and phosphorus (+P) addition investigated nitrogen (N) and phosphorus (P) concentrations of the aboveground tissue (leaf and branch) of two widely distributed understory native species Clerodendrum cyrtophyllum and Uvaria microcarpa in a secondary tropical forest of South China. The results showed that: 1) the N and P concentrations of the two species were significantly different (P < 0.001); N and P concentrations of different tissues in the same species were different; N&P addition greatly affected N and P concentrations in branch rather than new leaf and older leaf. 2) +N treatment had no significant effect on N or P concentrations of either species, but significantly decreased N:P ratios (P = 0.001), at the level of 9% for C. cyrtophyllum and 50% for U. microcarpa, respectively. 3) +P treatment had no significant effect on tissue N concentrations, but significantly increased plant P concentrations (P < 0.001), at 54% for C. cyrtophyllum and 88% for U. microcarpa, respectively; +P treatment significantly decreased plant N:P ratios (P < 0.001), at 28% and 60%, respectively. 4) The alterations of P concentrations of two species had significantly negative correlations with N:P alterations under +N/+P treatment (P < 0.001), suggesting that the alteration of P concentrations in plant tissue was the major driver for N:P alteration. Our results show that N and P addition would affect tissue N and P concentrations of the two species, with +P treatment having relatively greater effect on nutrient concentrations than +N treatment; the branch is more sensitive than new or older leaf in response to nutrient addition. Therefore, P availability may be the limiting factor for plant growth in the tropical forests.