Assessing the microbial activity of soil samples,its nutrient limitation and toxic effects of contaminants using a simple respiration test

Eight soil samples from five wells of a former gas plant site differing in the contamination with BTEX and PAHs as well as the nutrient content were investigated by soil respiration measurements. The basal, glucose as well as NH4+ and PO4(3-) induced cumulative oxygen consumption and carbon dioxide production in 72 and 120 h were determined and additionally the maximal turnover rates and the limitation quotients were calculated. Without additional carbon source only one of five investigated samples was clearly nutrient limited. After glucose supplementation four of seven investigated samples showed nutrient limitation that was in accordance with the available ammonium and phosphorous content. BTEX and PAHs did not exhibit an inhibiting effect on the respiration rate. In contrast, BTEX containing samples exhibited the highest oxygen consumption indicating biodegradation of the contaminants. The results show that oxygen consumption and carbon dioxide production as well as the kinetic of these processes are all informative parameters characterizing the whole microbial respiration potential and their nutrient limitation in soil samples. Therefore this fast respirometric method can be used for the decision if further detailed studies of the bioremediation are useful and if nutrient supplementation is recommended to enhance natural attenuation.     

Fossil bog soils (‘<Emphasis Type="Italic">dwog</Emphasis> horizons’) and their relation to Holocene coastal changes in the Jade Weser region,southern North Sea,Germany

After the deceleration of the postglacial marine transgression, the German North Sea coast was subject to deposition of a complex pattern of subtidal to terrestrial facies. This study aims at reconstructing these facies changes in the ‘Land Wursten’ region (Lower Saxony) by focussing on so-called dwog horizons (incipient soil horizons of the pre-engineered salt marshes). We explore their implications for relative sea-level reconstructions and their indication for early settlement activities. Archive drilling data (1960, provided by the ‘Landesamt für Bergbau, Energie und Geologie’) were analysed to create five high-resolution stratigraphic cross sections. Three new drilling records were subjected to sedimentological and microfaunal investigations and interpreted to verify and calibrate the archive data. Two dwog horizons were found and ¹⁴C-AMS dated. We found basal salt marsh deposits inundated by a high-energy event and covered by tidal flat sediments. The thick tidal flat unit is again overlain by salt marsh deposits indicating the transition from a shallow marine to a terrestrial environment where dwogs were developed and covered by episodic marine incursions. The ages of the dwogs (1128–969 cal BC; cal AD 1426–1467) do not correlate with known layers of adjacent settlement sites and are critically discussed. However, we show that they correlate with phases of stagnant regional relative sea level (RSL) and can be used as RSL indicators. The combined archive and modern data provide valuable information for the RSL reconstruction and palaeoenvironmental changes. However, further research is recommended to accomplish more detailed information about coastal response during the Holocene sea-level changes and implications for settlement dynamics.     

Targeting aquatic microcontaminants for monitoring: exposure categorization and application to the Swiss situation

Background, aim, and scope  

Aquatic microcontaminants (MCs) comprise diverse chemical classes, such as pesticides, biocides, pharmaceuticals, consumer products, and industrial chemicals. For water pollution control and the evaluation of water protection measures, it is crucial to screen for MCs. However, the selection and prioritization of which MCs to screen for is rather difficult and complex. Existing methods usually are strongly limited because of a lack of screening regulations or unavailability of required data.     

Competitive mobilization of phosphate and arsenate associated with goethite by root activity

Arsenate (As V) is the predominant form of arsenic in soils under aerobic conditions and competes with the major plant nutrient phosphorus (P) in the form of phosphate (PV) not only for sorption sites on mineral surfaces in soil but also for root membrane transporters. Plants have evolved several mechanisms for the mobilization of PV in soils in response to P deficiency, such as the release of organic anions and protons. The aim of the present study was to test whether these mechanisms result in a simultaneous mobilization of arsenate and what would be the consequences for As transfer from soil to plant. The compartment system approach with Zea mays as model crop was chosen as an experimental setup. The system is equipped with micro suction cups and allowed us to investigate processes occurring in the vicinity of roots. As a case study, an artificial quartz substrate with well defined soil physical properties was fertilized, spiked with As V, and amended with increasing amounts of goethite (0, 1, and 4 g kg(-1) in treatments G-0, G-1, and G-4, respectively). The addition of goethite alleviated the As V-induced growth reduction and reduced As V transfer from the substrate to the plant but induced P deficiency at the same time. When low amounts of goethite (1 g kg(-1)) were added, plants mobilized PV but not As V, which might be related to differences in surface complexation reported for PV and As V. No mobilization of PV or As V was observed with the addition of higher amounts of goethite, probably because of decreasing competition between organic anions, PV, and As V for binding sites.     

Effects of nickel chloride and oxygen depletion on behaviour and vitality of zebrafish (Danio rerio, Hamilton, 1822) (Pisces, Cypriniformes) embryos and larvae

We examined acute (2 h exposure of 5-day-old larvae) and subchronic (exposure from fertilization up to an age of 11 days) effects of NiCl(2).6H2O on embryos and larvae of zebrafish (Danio rerio), both alone and in combination with oxygen depletion. The following endpoints were recorded: acute exposure: locomotory activity and survival; subchronic exposure: hatching rate, deformations, locomotory activity (at 5, 8 and 11 days) and mortality. In acute exposures nickel chloride (7.5-15 mg Ni/L) caused decreasing locomotory activity. Oxygen depletion (or=10 mg Ni/L resulted in delayed hatching at an age of 96 h, in decreased locomotory activity at an age of 5 days, and increased mortality at an age of 11 days (LC20=9.5 mg Ni/L). The observed LOEC for locomotory activity (7.5 mg Ni/L) is in the range of environmentally relevant concentrations. Since locomotory activity was already affected by acute exposure, this parameter is recommended to supplement commonly recorded endpoints of toxicity.     

Low Pathogenic Avian Influenza Viruses (H3N8, H5N6): In Vitro Influence of <Emphasis Type="SmallCaps">d</Emphasis>,<Emphasis Type="SmallCaps">l</Emphasis>-Lactic Acid and Sodium Chloride on Infectivity and Virus Persistence in Short Fermented Raw Poultry Sausage

Since highly pathogenic avian influenza virus H5N1 emerged in 1997, avian influenza is considered one of the most important infectious diseases globally. In respect of virus transmission to humans, the consumption of raw poultry products remains of serious concern. In this study, data about survival time and inactivation kinetics of two low pathogenic avian influenza virus (AIV) strains (H3N8, H5N6) in short fermented raw sausage were obtained. In addition, the impact of the preserving factors d,l-lactic acid and sodium chloride on virus infectivity was evaluated through in vitro studies. Virus infectivity was confirmed in embryonated chicken eggs. Inactivation of H3N8 was seen in d,l-lactic acid solutions (0.15 and 0.20%, pH 4.40–4.70 and pH 3.80–3.91) at both temperatures (20 vs. 4°C) during 3 days of exposure. However, infectious virus particles could still be detected after exposure to 0.1% d,l-lactic acid (pH 5.80–5.99). In all NaCl solutions (2, 6 and 12% w/v), infectivity of the H3N8 strain decreased steadily but reduction of the virus titre increased significantly with higher temperature. In raw sausages, decline in virus titre was observed for both strains during ripening and storage. Thereby, decline of virus infectivity was dependent on time and temperature with a more marked effect at higher temperatures (22 vs. 7°C). At refrigeration (7°C), both viruses maintained infectivity over 14 days. Results indicate that appropriate processing of short fermented raw poultry sausage is likely to reduce risk of virus exposure due to adequate inactivation of AIV during ripening and storage.     

Collembola gut passage shapes microbial communities in faecal pellets but not viability of dietary algal cells

Microarthropods are known as vectors for soil microorganisms, predominantly fungi. This laboratory study uses the widespread unicellular green algae Chlorella vulgaris as model to assess the role of Collembola in algal dispersal and to determine the effects of gut passage on propagation. Living algal cells were observed in 70 % of the faecal pellets of Folsomia candida, Heteromurus nitidus and Protaphorura fimata. Moreover, marker fatty acids for green algae, i.e. 16:2ω6,9 and 16:3ω3,6,9, were consistently detected in the pellets. Compared to the algal diet, the high content of methyl-branched total lipid fatty acid (TLFA) with hydroxyl substitution indicated microbial colonisation during gut passage. The TLFA profile of faeces revealed no species-specific differences but similar changes in microbial communities over the duration of feeding, indicating comparable indigenous bacteria and colonisation mechanisms during gut passage. In sum, faecal pellets of soil microarthropods such as Collembola can act as a vector for both dietary algae and specific gut-associated microorganisms, with the latter likely involved in resource degradation inside and outside the gut habitat.     

Nutrient Sources and Transport in the Missouri River Basin,with Emphasis on the Effects of Irrigation and Reservoirs1

Brown, Juliane B., Lori A. Sprague, and Jean A. Dupree, 2011. Nutrient Sources and Transport in the Missouri River Basin, With Emphasis on the Effects of Irrigation and Reservoirs. Journal of the American Water Resources Association (JAWRA) 47(5):1034‐1060. DOI: 10.1111/j.1752‐1688.2011.00584.x Abstract: SPAtially Referenced Regressions On Watershed attributes (SPARROW) models were used to relate instream nutrient loads to sources and factors influencing the transport of nutrients in the Missouri River Basin. Agricultural inputs from fertilizer and manure were the largest nutrient sources throughout a large part of the basin, although atmospheric and urban inputs were important sources in some areas. Sediment mobilized from stream channels was a source of phosphorus in medium and larger streams. Irrigation on agricultural land was estimated to decrease the nitrogen load reaching the Mississippi River by as much as 17%, likely as a result of increased anoxia and denitrification in the soil zone. Approximately 16% of the nitrogen load and 33% of the phosphorus load that would have otherwise reached the Mississippi River was retained in reservoirs and lakes throughout the basin. Nearly half of the total attenuation occurred in the eight largest water bodies. Unlike the other major tributary basins, nearly the entire instream nutrient load leaving the outlet of the Platte and Kansas River subbasins reached the Mississippi River. Most of the larger reservoirs and lakes in the Platte River subbasin are upstream of the major sources, whereas in the Kansas River subbasin, most of the source inputs are in the southeast part of the subbasin where characteristics of the area and proximity to the Missouri River facilitate delivery of nutrients to the Mississippi River.     

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