Variability in the phytoplankton community of Kavaratti reef ecosystem (northern Indian Ocean) during peak and waning periods of El Niño 2016

El Niño, an interannual climate event characterized by elevated oceanic temperature, is a prime threat for coral reef ecosystems worldwide, owing to their thermal threshold sensitivity. Phytoplankton plays a crucial role in the sustenance of reef trophodynamics. The cell size of the phytoplankton forms the “master morphological trait” with implications for growth, resource acquisition, and adaptability to nutrients. In the context of a strong El Niño prediction for 2015–2016, the present study was undertaken to evaluate the variations in the size-structured phytoplankton of Kavaratti reef waters, a major coral atoll along the southeast coast of India. The present study witnessed a remarkable change in the physicochemical environment of the reef water and massive coral bleaching with the progression of El Niño 2015–2016 from its peak to waning phase. The fluctuations observed in sea surface temperature, pH, and nutrient concentration of the reef water with the El Niño progression resulted in a remarkable shift in phytoplankton size structure, abundance, and community composition of the reef waters. Though low nutrient concentration of the waning phase resulted in lower phytoplankton biomass and abundance, the diazotroph Trichodesmium erythraeum predominated the reef waters, owing to its capability of the atmospheric nitrogen fixation and dissolved organic phosphate utilization.     

Antibiotic resistance and plasmid profiling of <Emphasis Type="Italic">Vibrio</Emphasis> spp. in tropical waters of Peninsular Malaysia

Vibrio species isolated from four different sampling stations in the west coast of Peninsular Malaysia were screened for their antimicrobial resistance and plasmid profiles. A total of 138 isolates belonging to 15 different species were identified. Vibrio campbellii, V. parahaemolyticus, V. harveyi, and V. tubiashii were found to predominance species at all stations. High incidence of erythromycin, ampicillin, and mecillinam resistance was observed among the Vibrio isolates. In contrast, resistance against aztreonam, cefepime, streptomycin, sulfamethoxazole, and sulfonamides was low. All the Vibrio isolates in this study were found to be susceptible to imipenem, norfloxacin, ofloxacin, chloramphenicol, trimethoprim/sulfamethoxazole, and oxytetracycline. Ninety-five percent of the Vibrio isolates were resistant to one or more different classes of antibiotic, and 20 different resistance antibiograms were identified. Thirty-two distinct plasmid profiles with molecular weight ranging from 2.2 to 24.8 kb were detected among the resistance isolates. This study showed that multidrug-resistant Vibrio spp. were common in the aquatic environments of west coast of Peninsular Malaysia.     

Source identification and apportionment of PM2.5 and PM2.5−10 in iron and steel scrap smelting factory environment using PMF,PCFA and UNMIX receptor models

To identify the potential sources responsible for the particulate matter emission from secondary iron and steel smelting factory environment, PM_2.5 and PM_2.5?10 particles were collected using the low-volume air samplers twice a week for a year. The samples were analyzed for the elemental and black carbon content using x-ray fluorescence spectrometer and optical transmissometer, respectively. The average mass concentrations were 216.26, 151.68, and 138. 62 μg/m³ for PM_2.5 and 331.36, 190.01, and 184.60 μg/m³ for PM_2.5?10 for the production, outside M1 and outside M2 sites, respectively. The same size resolved data set were used as input for the positive matrix factorization (PMF), principal component factor analysis (PCFA), and Unmix (UNMIX) receptor modeling in order to identify the possible sources of particulate matter and their contribution. The PMF resolved four sources with their respective contributions were metal processing (33 %), e-waste (33 %), diesel emission (22 %) and soil (12 %) for PM_2.5, and coking (50 %), soil (29 %), metal processing (16 %) and diesel combustion (5 %) for PM_2.5?10. PCFA identified soil, metal processing, Pb source, and diesel combustion contributing 45, 41, 9, and 5 %, respectively to PM_2.5 while metal processing, soil, coal combustion and open burning contributed 43, 38, 12, and 7 %, respectively to the PM_2.5?10. Also, UNMIX identified metal processing, soil, and diesel emission with 43, 42 and 15 % contributions, respectively for the fine fraction, and metal processing (71 %), soil (21 %) and unidentified source (1 %) for the coarse fraction. The study concluded that metal processing and e-waste are the major sources contributing to the fine fraction while coking and soil contributed to the coarse fraction within the factory environment. The application of PMF, PCFA and UNMIX receptor models improved the source identification and apportionment of particulate matter drive in the study area.     

Characterizing spatial structure of sediment E. coli populations to inform sampling design

Escherichia coli can persist in streambed sediments and influence water quality monitoring programs through their resuspension into overlying waters. This study examined the spatial patterns in E. coli concentration and population structure within streambed morphological features during baseflow and following stormflow to inform sampling strategies for representative characterization of E. coli populations within a stream reach. E. coli concentrations in bed sediments were significantly different (p?=?0.002) among monitoring sites during baseflow, and significant interactive effects (p?=?0.002) occurred among monitoring sites and morphological features following stormflow. Least absolute shrinkage and selection operator (LASSO) regression revealed that water velocity and effective particle size (D ₁₀) explained E. coli concentration during baseflow, whereas sediment organic carbon, water velocity and median particle diameter (D ₅₀) were important explanatory variables following stormflow. Principle Coordinate Analysis illustrated the site-scale differences in sediment E. coli populations between disconnected stream segments. Also, E. coli populations were similar among depositional features within a reach, but differed in relation to high velocity features (e.g., riffles). Canonical correspondence analysis resolved that E. coli population structure was primarily explained by spatial (26.9–31.7 %) over environmental variables (9.2–13.1 %). Spatial autocorrelation existed among monitoring sites and morphological features for both sampling events, and gradients in mean particle diameter and water velocity influenced E. coli population structure for the baseflow and stormflow sampling events, respectively. Representative characterization of streambed E. coli requires sampling of depositional and high velocity environments to accommodate strain selectivity among these features owing to sediment and water velocity heterogeneity.     

Carbon, nitrogen, and phosphorus stoichiometry of plankton and the nutrient regime in Cabo Frio Bay, SE Brazil

This long-term study, performed during the years 2003–2005 and 2008–2009, investigated the carbon (C), nitrogen (N), and phosphorus (P) contents of the phyto- and zooplankton communities and the nutrient regime of Cabo Frio Bay, SE Brazil. The information intends to serve as baseline of the plankton C, N, and P stoichiometry for the calibration of biogeochemical and ecological models in support to future findings related to the local and regional phenomena of climatic change. Cabo Frio Bay is a small semienclosed system set adjacent to a region subject to sporadic coastal upwelling. Zooplankton exhibited average annual C, N, and P contents of 11.6?±?6.9 %, 2.8?±?1.8 %, and 0.18?±?0.08 %, and phytoplankton (>20 μm) 6.8?±?6.0 %, 1.6?±?1.5 %, and 0.09?±?0.08 %, respectively. The C/N/P ratios correspond to the lowest already found to date for a marine environment. The low C contents must have been brought about by a predominance of gelatinous zooplankton, like Doliolids/ Salps and also Pteropods. Average annual nutrient concentrations in the water were 0.21?±?0.1 μM for phosphate, 0.08?±?0.1 μM for nitrite, 0.74?±?1.6 μM for nitrate, and 1.27?±?1.1 μM for ammonium. N/P ratios were around 8:1 during the first study period and 12:1 during the second. The plankton C/N/P and N/P nutrient ratios and elemental concentrations suggest that the system was oligotrophic and nitrogen limited. The sporadic intrusions of upwelling waters during the first study period had no marked effect upon the systems metabolism, likely due to dilution effects and the short residence times of water of the bay.