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101.
Laura Serra Marc Saez Jorge Mateu Diego Varga Pablo Juan Carlos Díaz-Ávalos Håvard Rue 《Environmental and Ecological Statistics》2014,21(3):531-563
Wildfires have become one of the principal environmental problems in the Mediterranean basin. While fire plays an important role in most terrestrial plant ecosystems, the potential hazard that it represents for human lives and property has led to the application of fire exclusion policies that, in the long term, have caused severe damage, mainly due to the increase of fuel loadings in forested areas, in some forest systems. The lack of an easy solution to forest fire management highlights the importance of preventive tasks. The observed spatio-temporal pattern of wildfire occurrences may be idealized as a realization of some stochastic process. In particular, we may use a space–time point pattern approach for the analysis and inference process. We studied wildfires in Catalonia, a region in the north-east of the Iberian Peninsula, and we analyzed the spatio-temporal patterns produced by those wildfire incidences by considering the influence of covariates on trends in the intensity of wildfire locations. A total of 3,166 wildfires from 1994–2008 have been recorded. We specified spatio-temporal log-Gaussian Cox process models. Models were estimated using Bayesian inference for Gaussian Markov Random Field through the integrated nested Laplace approximation algorithm. The results of our analysis have provided statistical evidence that areas closer to humans have more human induced wildfires, areas farther have more naturally occurring wildfires. We believe the methods presented in this paper may contribute to the prevention and management of those wildfires which are not random in space or time. 相似文献
102.
Huijbers CM Nagelkerken I Lössbroek PA Schulten IE Siegenthaler A Holderied MW Simpson SD 《Ecology》2012,93(1):46-55
Habitat-specific cues play an important role in orientation for animals that move through a mosaic of habitats. Environmental cues can be imprinted upon during early life stages to guide later return to adult habitats, yet many species must orient toward suitable habitats without previous experience of the habitat. It is hypothesized that multiple sensory cues may enable animals to differentiate between habitats in a sequential order relevant to the spatial scales over which the different types of information are conveyed, but previous research, especially for marine organisms, has mainly focused on the use of single cues in isolation. In this study, we investigated novel habitat selection through the use of three different sensory modalities (hearing, vision, and olfaction). Our model species, the French grunt, Haemulon flavolineatum, is a mangrove/seagrass-associated reef fish species that makes several habitat transitions during early life. Using several in situ and ex situ experiments, we tested the response of fish toward auditory, olfactory, and visual cues from four different habitats (seagrass beds, mangroves, rubble, and coral reef). We identified receptivity to multiple sensory cues during the same life phase, and found that different cues induced different reactions toward the same habitat. For example, early-juvenile fish only responded to sound from coral reefs and to chemical cues from mangroves/seagrass beds, while visual cues of conspecifics overruled olfactory cues from mangrove/seagrass water. Mapping these preferences to the ecology of ontogenetic movements, our results suggest sequential cue use would indeed aid successful orientation to novel key habitats in early life. 相似文献
103.
It is well known that arboreal ants, both territorially dominant species and plant ants (e.g., species associated with myrmecophytes or plants housing them in hollow structures), protect their host trees from defoliators. Nevertheless, the presence of an induced defense, suggested by the fact that the workers discovering a leaf wound recruit nestmates, is only known for plant ants. Based on the results from a field study, we show here (1) that colonies of Azteca chartifex, a territorially dominant, neotropical arboreal ant species, mostly selected Goupia glabra (Goupiaceae) trees in which to build their principal carton nests and (2) that plant signals induced workers to recruit nestmates, which patrol the leaves, likely providing the plant with a biotic defense. Furthermore, the number of recruited workers was clearly higher on G. glabra, their most frequently selected host tree species, than on other tree species. These results show that contrary to what was previously believed, induced responses are also found in territorially dominant arboreal ants and so are not limited to the specific associations between myrmecophytes and plant ants. 相似文献
104.
Eva Friis Møller Christian Marc Andersen Borg Sigrún H. Jónasdóttir Suree Satapoomin Cornelia Jaspers Torkel Gissel Nielsen 《Marine Biology》2011,158(3):677-688
The vertical distribution of copepods, fecal pellets and the fecal pellet production of copepods were measured at seven stations
across the Southern Indian Ocean from productive areas off South Africa to oligotrophic waters off Northern Australia during
October/November 2006. We quantified export of copepod fecal pellet from surface waters and how much was retained. Furthermore,
the potential impact of Oncaea spp. and harpacticoid copepods on fecal pellets degradation was evaluated and found to be regional substantial. The highest
copepod abundance and fecal pellet production was found in the western nutrient-rich stations close to South Africa and the
lowest at the central oligotrophic stations. The in situ copepod fecal pellet production varied between 1 and 1,000 μg C m−3 day−1. At all stations, the retention of fecal pellets in the upper 400 m of the water column was more than 99% and the vertical
export of fecal pellets was low (<0.02 mg m−2 day−1). 相似文献
105.
The survival of many species in human-dominated, fragmented landscapes depends on metapopulation dynamics, i.e., on a dynamic equilibrium of extinctions and colonizations in patches of suitable habitat. To understand and predict distributional changes, knowledge of these dynamics can be essential, and for this, metapopulation studies are preferably based on long-time-series data from many sites. Alas, such data are very scarce. An alternative is to use opportunistic data (i.e., collected without applying standardized field methods), but these data suffer from large variations in field methods and search intensity between sites and years. Dynamic site-occupancy models offer a general approach to adjust for variable survey effort. These models extend classical metapopulation models to account for imperfect detection of species and yield estimates of the probabilities of occupancy, colonization, and survival of species at sites. By accounting for detection, they fully correct for among-year variability in search effort. As an illustration, we fitted a dynamic site-occupancy model to 60 years of presence-absence data (more precisely, detection-nondetection) of the heathland butterfly Hipparchia semele in The Netherlands. Detection records were obtained from a database containing volunteer-based data from 1950-2009, and nondetection records were deduced from database records of other butterfly species. Our model revealed that metapopulation dynamics of Hipparchia had changed decades before the species' distribution began to contract. Colonization probability had already started to decline from 1950 onward, but this was counterbalanced by an increase in the survival of existing populations, the result of which was a stable distribution. Only from 1990 onward was survival not sufficient to compensate for the further decrease of colonization, and occupancy started to decline. Hence, it appears that factors acting many decades ago triggered a change in the metapopulation dynamics of this species, which ultimately led to a severe decline in occupancy that only became apparent much later. Our study emphasizes the importance of knowledge of changes in survival and colonization of species in modern landscapes over a very long time scale. It also demonstrates the power of site-occupancy modeling to obtain important population dynamics information from databases containing opportunistic sighting records. 相似文献
106.
107.
Johnson MT 《Ecology》2008,89(1):145-154
Theory predicts that bottom-up ecological forces can affect community dynamics, but whether this extends to the effects of heritable plant variation on tritrophic communities is poorly understood. In a field experiment, I contrasted the effects of plant genotype (28 genotypes; 1064 plants), aphid density, and the presence/absence of mutualistic ants in affecting the per capita population growth of a specialist aphid herbivore, as well as the effects of plant genotype on the third trophic level. Plant genotype strongly affected aphid population growth rate, explaining 29% of the total variation in growth rate, whereas aphid density and ant-aphid interactions explained substantially less variation (< 2%) in aphid population growth rate. Plant genotype also had direct and indirect effects on the third trophic level, affecting the abundance of aphid-tending ants and the richness of predators. Multiple regression identified several heritable plant traits that explained 49% of the variation in aphid growth rate and 30% of the variation in ant abundance among plant genotypes. These bottom-up effects of plant genotype on tritrophic interactions were independent of the effects of either initial aphid density or the presence/absence of mutualistic ants. This study shows that plant genotype can be one of the most important ecological factors shaping tritrophic communities. 相似文献
108.
Adult Vinciguerria nimbaria are the main prey of tuna during the tuna fishing season (late autumn and winter) in the equatorial Atlantic (0–4°N, and
~15°W). V. nimbaria trophic behavior in the fishing grounds was studied in relation to hydrobiological factors to determine its role in the trophic
food web. Sampling stations spaced by 20 nautical miles were set up along a 15°W north–south transect from 4°N to 0°40S. At
each station, the temperature and vertical fluorescence profiles were recorded. Nitrate and chlorophyll a analyses were performed on water sampled at different levels in the euphotic zone. Vertical plankton hauls were carried out
at depths of 0–100 and 0–200 m using a standard WP2 net fitted with a 200-μm mesh gauze. Vinciguerria nimbaria adults were collected using a young-fish mid-water trawl net (10 × 15 m opening mouth, 10 mm cod end mesh). The weight of
the stomach contents, the stomach fullness index, the number of prey, the frequency of occurrence and the prey preponderance
were recorded for 20 fish from each haul. An oligotrophic typical tropical structure (TTS) was found between 1° and 4°N where
small zooplankton was relatively abundant above or near the thermocline. In the TTS, V. nimbaria behaved as an epipelagic fish, feeding on the dominant small prey during the daytime. In turn, it was a prey for tuna. In
the equatorial zone, where zooplankton was more abundant than in the north equatorial zone, V. nimbaria behaved as a mesopelagic fish and as an opportunistic mesozooplankton feeder. It consumed a wide range of sizes of food,
feeding on the most abundant species of zooplankton as well as the largest zooplankton species, possibly while migrating towards
the surface in the late afternoon or in the deep layer. 相似文献
109.
Jan Peters Niko E.C. Verhoest Roeland Samson Marc Van Meirvenne Liesbet Cockx Bernard De Baets 《Ecological modelling》2009
Ensemble learning techniques are increasingly applied for species and vegetation distribution modelling, often resulting in more accurate predictions. At the same time, uncertainty assessment of distribution models is gaining attention. In this study, Random Forests, an ensemble learning technique, is selected for vegetation distribution modelling based on environmental variables. The impact of two important sources of uncertainty, that is the uncertainty on spatial interpolation of environmental variables and the uncertainty on species clustering into vegetation types, is quantified based on sequential Gaussian simulation and pseudo-randomization tests, respectively. An empirical assessment of the uncertainty propagation to the distribution modelling results indicated a gradual decrease in performance with increasing input uncertainty. The test set error ranged from 30.83% to 52.63% and from 30.83% to 83.62%, when the uncertainty ranges on spatial interpolation and on vegetation clustering, respectively, were fully covered. Shannon’s entropy, which is proposed as a measure for uncertainty of ensemble predictions, revealed a similar increasing trend in prediction uncertainty. The implications of these results in an empirical distribution modelling framework are further discussed with respect to monitoring setup, spatial interpolation and species clustering. 相似文献
110.
Quantification of copepod gut content by differential length amplification quantitative PCR (dla-qPCR) 总被引:1,自引:0,他引:1
Christofer Troedsson Paolo Simonelli Verena Nägele Jens C. Nejstgaard Marc E. Frischer 《Marine Biology》2009,156(3):253-259
Quantification of feeding rates and selectivity of zooplankton is vital for understanding the mechanisms structuring marine
ecosystems. However, methodological limitations have made many of these studies difficult. Recently, molecular based methods
have demonstrated that DNA from prey species can be used to identify zooplankton gut contents, and further, quantitative gut
content estimates by quantitative PCR (qPCR) assays targeted to the 18S rRNA gene have been used to estimate feeding rates
in appendicularians and copepods. However, while standard single primer based qPCR assays were quantitative for the filter
feeding appendicularian Oikopleura dioica, feeding rates were consistently underestimated in the copepod Calanus finmarchicus. In this study, we test the hypothesis that prey DNA is rapidly digested after ingestion by copepods and describe a qPCR-based
assay, differential length amplification qPCR (dla-qPCR), to account for DNA digestion. The assay utilizes multiple primer
sets that amplify different sized fragments of the prey 18S rRNA gene and, based on the differential amplification of these
fragments, the degree of digestion is estimated and corrected for. Application of this approach to C. finmarchicus fed Rhodomonas marina significantly improved quantitative feeding estimates compared to standard qPCR. The development of dla-qPCR represents a
significant advancement towards a quantitative method for assessing in situ copepod feeding rates without involving cultivation-based
manipulation. 相似文献