Twelve years of assessing the quality of preimplantation genetic testing for monogenic disorders

Objective

Genomics Quality Assessment has provided external quality assessments (EQAs) for preimplantation genetic testing (PGT) for 12 years for eight monogenic diseases to identify sub-optimal PGT strategies, testing and reporting of results, which can be shared with the genomics community to aid optimised standards of PGT services for couples.

Method

The EQAs were provided in two stages to mimic end-to-end protocols. Stage 1 involved DNA feasibility testing of a couple undergoing PGT and affected proband. Participants were required to report genotyping results and outline their embryo testing strategy. Lymphoblasts were distributed for mock embryo testing for stage 2. Submitted clinical reports and haplotyping results were assessed against peer-ratified criteria. Performance was monitored to identify poor performance.

Results

The most common testing methodology was short tandem repeat linkage analysis (59%); however, the adoption of single nucleotide polymorphism-based platforms was observed and a move from blastomere to trophectoderm testing. There was a variation in testing strategies, assigning marker informativity and understanding test limitations, some clinically unsafe. Critical errors were reported for genotyping and interpretation.

Conclusion

EQA provides an overview of the standard of preimplantation genetic testing-M clinical testing and identifies areas of improvement for accurate detection of high-risk embryos.     

Some Dependence Models for the Time Between Ozone Exceedances in Mexico City

In this paper, we consider several modelling approaches for the mean time between exceedances of a given environmental threshold. The interest here resides in the time between ozone exceedances (also called ozone inter-exceedances times). The proposed models assume two basic density functions for the time between surpassings: the Weibull and the generalised exponential functions. Considering those distributions, a random effect with autoregressive structure is taken into account to determine unexpected changes in the mean of the inter-exceedances density functions. Those unexpected changes could be captured either by their scale parameter or by both their scale and shape parameters. The models are applied to ozone data from the monitoring network of Mexico City. Selection of the model that best explains the data is performed using the deviance information criterion and also the sum of the absolute values of the differences between the estimated and observed means of the inter-exceedances times. An analysis to detect the possible presence of change-points is also presented.     

Brownfield Redevelopment versus Greenfield Development: A Private Sector Perspective on the Costs and Risks Associated with Brownfield Redevelopment in the Greater Toronto Area

This paper examines the nature of the economic costs and risks involved in brownfield versus greenfield redevelopment in the Greater Toronto Area (Ontario, Canada) from a private sector perspective, and assesses the potential effectiveness of different policies and programmes designed to attenuate associated costs and risks. Through interviews, case-studies and an analysis of hypothetical development scenarios, it has been found that the perception that brownfield redevelopment is less cost-effective and entails greater risks than greenfield development, on the part of the private sector, is true for industrial projects in the province, but not for residential ones, which were found to be feasible, given the assumptions of the present study. Furthermore, the study has found that the attractiveness of residential brownfield projects can increase considerably with minor policy changes, but that promoting industrial redevelopment will require a more vigorous approach that employs a variety of environmental policy and economic development measures.     

Additional steps in mechanical recyling of PET

This study presents the laboratory scale results of an extra step in Poly (ethylene terephthalate) – PET mechanical recycling (grinding, washing, drying and reprocessing): a chemical washing after the conventional one. Cooking oil PET bottle flakes were washed in water and then subjected to a reaction with an aqueous solution of sodium hydroxide 5 M at 90 °C for 10 min (chemical washing). After rinsing and drying, the flakes were characterized by thermogravimetry, gas chromatography and elemental analysis tests. The results indicated that the chemically washed material had higher purity than PET washed only with water: 99.3% and 96.7%, respectively, which undoubtedly implies properties, applications and prices closer to those of virgin resin. The production of purified terephthalic acid (TPA) from the chemical washing residue was optimized and reached a purity of 99.6%. Despite the results, the use of chemically washed PET and of TPA obtained is not recommended for direct contact with food, since they still contain some impurities.     

Clean catalytic technology for liquid phase hydrocarbon oxidation

 Liquid phase hydrocarbon oxidation is one of the principal routes towards industrial organic chemicals. However, low product selectivity and associated by-product formation are major problems in several oxidation processes. As a result of the increasingly stringent environmental regulations, the development of oxidation catalysts has been a major challenge in the last decade. An overview of novel selective and clean oxidation catalysts and processes is presented. Received: 27 July 1998 / Accepted: 8 September 1998