Inferring linear feature use in the presence of GPS measurement error

Global Positioning System (GPS) collars are increasingly used to study animal movement and habitat use. Measurement error is defined as the difference between the observed and true value being measured. In GPS data measurement error is referred to as location error and leads to misclassification of observed locations into habitat types. This is particularily true when studying habitats of small spatial extent with large amounts of edge, such as linear features (e.g. roads and seismic lines). However, no consistent framework exists to address the effect of measurement error on habitat classification of observed locations and resulting biological inference. We developed a mechanistic, empirically-based method for buffering linear features that minimizes the underestimation of animal use introduced by GPS measurement error. To do this we quantified the distribution of measurement error and derived an explicit formula for buffer radius which incorporated the error distribution, the width of the linear feature, and a predefined amount of acceptable type I error in location classification. In our empirical study we found the GPS measurement error of the Lotek GPS_3300 collar followed a bivariate Laplace distribution with parameter ρ = 0.1123. When we applied our method to a simulated landscape, type I error was reduced by 57%. This study highlights the need to address the effect of GPS measurement error in animal location classification, particularily for habitats of small spatial extent.     

Effects of sampling error and temporal correlations in population growth on process variance estimators

Estimates of a population’s growth rate and process variance from time-series data are often used to calculate risk metrics such as the probability of quasi-extinction, but temporal correlations in the data from sampling error, intrinsic population factors, or environmental conditions can bias process variance estimators and detrimentally affect risk predictions. It has been claimed (McNamara and Harding, Ecol Lett 7:16–20, 2004) that estimates of the long-term variance that incorporate observed temporal correlations in population growth are unaffected by sampling error; however, no estimation procedures were proposed for time-series data. We develop a suite of such long-term variance estimators, and use simulated data with temporally autocorrelated population growth and sampling error to evaluate their performance. In some cases, we get nearly unbiased long-term variance estimates despite ignoring sampling error, but the utility of these estimators is questionable because of large estimation uncertainty and difficulties in estimating correlation structure in practice. Process variance estimators that ignored temporal correlations generally gave more precise estimates of the variability in population growth and of the probability of quasi-extinction. We also found that the estimation of probability of quasi-extinction was greatly improved when quasi-extinction thresholds were set relatively close to population levels. Because of precision concerns, we recommend using simple models for risk estimates despite potential biases, and limiting inference to quantifying relative risk; e.g., changes in risk over time for a single population or comparative risk among populations.     

Heavy metals in potable groundwater of mining-affected river catchments,northwestern Romania

Groundwater, accessed using wells and municipal springs, represents the major source of potable water for the human population outside of major urban areas in northwestern Romania, a region with a long history of metal mining and metallurgy. The magnitude and spatial distribution of metal contamination in private-supply groundwater was investigated in four mining-affected river catchments in Maramureş and Satu Mare Counties through the collection of 144 groundwater samples. Bedrock geology, pH and Eh were found to be important controls on the solubility of metals in groundwater. Peak metal concentrations were found to occur in the Lapuş catchment, where metal levels exceed Dutch target and intervention values in up to 49% and 14% of samples, respectively. A 700 m wide corridor in the Lapuş catchment on either side of the main river channel was identified in which peak Cd (31 μg l⁻¹), Cu (50 μg l⁻¹), Pb (50 μg l⁻¹) and Zn (3,000 μg l⁻¹) concentrations were found to occur. Given the generally similar bedrock geologies, lower metal levels in other catchments are believed to reflect differences in the magnitude of metal loading to the local environment from both metal mining and other industrial and municipal sources. Sampling of groundwater in northwestern Romania has indicated areas of potential concern for human health, where heavy metal concentrations exceed accepted environmental quality guidelines. The presence of elevated metal levels in groundwater also has implications for the implementation of the EU Water Framework Directive (WFD) and achieving ‘good’ status for groundwater in this part of the Danube River Basin District (RBD).     

THE IMPORTANCE OF BEAVER TO WETLAND HABITATS AND WATERFOWL IN WYOMING1

ABSTRACT: Beaver (Castor canadensis) are habitat‐modifying keystone species, and their activities broadly influence many other plants and animals. Beaver are especially important to waterfowl in the western U.S. where riparian and wetland habitats comprise less than 2 percent of the landscape yet provide habitat for greater than 80 percent of wildlife species. Wyoming is currently ranked sixth of the 50 states in the size of its breeding waterfowl population, and beaver ponds may play a significant role in providing habitat for these birds. The objectives of this research were to: (1) identify streams in Wyoming where beaver are currently present, extirpated, or used to manage riparian habitat; (2) identify areas where beaver could be relocated to create wetlands and improve riparian habitat; (3) compare wetland surface areas between areas that have beaver with those that did not; and (4) compare waterfowl numbers in areas with and without beaver. Using a survey of 125 land managers in Wyoming, we found that beaver have been removed from 23 percent (6,497 kin) of the streams for which managers had direct knowledge (28,297 kin). The same managers estimated that there are over 3,500 km of streams where beaver could improve habitat conditions. The riparian width in streams with beaver ponds averaged 33.9 m (95 percent CI = 25.1–42.7 m) in contrast to 10.5 m (CI = 8.6–12.4 m) in streams without beaver. During waterfowl surveys we counted 7.5 ducks/km (CI = O.9–14.4 ducks/kin) of stream in areas with beaver ponds and only O.1 ducks/km (no CIs calculated) of stream in similar areas without beaver present. Beginning in 1994, we restored beaver to 14 streams throughout Wyoming in an effort to create wetlands and improve riparian habitat. Waterfowl have been quick to respond to these important habitats. We feel that beaver restoration and management can be used to improve habitat in drainages where conflicts with other land uses are minimal.     

IMPACTS OF CLIMATE CHANGE ON MISSOURI RWER BASIN WATER YIELD1

ABSTRACT: Water from the Missouri River Basin is used for multiple purposes. The climatic change of doubling the atmospheric carbon dioxide may produce dramatic water yield changes across the basin. Estimated changes in basin water yield from doubled CO₂ climate were simulated using a Regional Climate Model (RegCM) and a physically based rainfall‐runoff model. RegCM output from a five‐year, equilibrium climate simulation at twice present CO₂ levels was compared to a similar present‐day climate run to extract monthly changes in meteorologic variables needed by the hydrologic model. These changes, simulated on a 50‐km grid, were matched at a commensurate scale to the 310 subbasin in the rainfall‐runoff model climate change impact analysis. The Soil and Water Assessment Tool (SWAT) rainfall‐runoff model was used in this study. The climate changes were applied to the 1965 to 1989 historic period. Overall water yield at the mouth of the Basin decreased by 10 to 20 percent during spring and summer months, but increased during fall and winter. Yields generally decreased in the southern portions of the basin but increased in the northern reaches. Northern subbasin yields increased up to 80 percent: equivalent to 1.3 cm of runoff on an annual basis.     

SIMULATING FLOW IN REGIONAL WETLANDS WITH THE MODFLOW WETLANDS PACKAGE1

ABSTRACT: As part of the Comprehensive Everglades Restoration Plan (CERP), various water supply projects have been proposed in a region located between the Miami metropolitan area and the extensive regional wetland systems that are part of the Everglades or remnant Everglades. A ground water flow model of the surficial aquifer within northern Miami‐Dade County was constructed using MODFLOW to evaluate the effects of these projects on water levels in the wetlands and the underlying surficial aquifer. The new Wetlands package was used to conjunctively simulate overland flow through these wetlands and the shallow ground water system. Comparisons of simulated to measured ground water levels and wetland stages were very satisfactory, where computed and measured water levels agreed within 0.5 ft over most of the period of record at nearly all of the monitoring sites. Temporal trends in water levels were also replicated. It was concluded that the assumptions and methodologies inherent to the Wetlands package were suitable for simulating regional wetland hydrology within the Everglades area.     

Co-Partnership in Forest Management: The Gwira-Banso Joint Forest Management Project in Ghana

The involvement of local communities, as well as the private sector and the government in forest management is now an important principle of tropical forestry policy and practice and a major component of most international forestry aid programmes. This paper present an analysis on the Joint Forest Management Project initiated by two timber companies (Ghana Primewood Products Ltd and Dalhoff Larsen & Horneman) in collaboration with local people in Gwira-Banso of Ghana. Conditions required for enhancing responsibility for and commitment to local forest management, and for an effective local participatory process were also analysed. The study began with the premise that incentives and good communication will enhance participation in joint forest management.The assumption was valid and the results from the survey showed that five broad issues prioritised by respondents to be essential for co-partnership in forest management are communication, financial support, tree planting, multiple land use and benefit sharing. The Project enjoys a great deal of support from the local community, but a number of factors make the continued support of local people a challenging task, including questions of immediate livelihood sources and tenure arrangements. Although this participatory forest management has been implemented over a relatively short period, there is evidence that government and private sectors can successfully involve local people in sustainable management of the forests.     

Slope,aspect and climate: Spatially explicit and implicit models of topographic microclimate in chalk grassland

The slope and aspect of a vegetated surface strongly affects the amount of solar radiation intercepted by that surface. Solar radiation is the dominant component of the surface energy balance and influences ecologically critical factors of microclimate, including near-surface temperatures, evaporative demand and soil moisture content. It also determines the exposure of vegetation to photosynthetically active and ultra-violet wavelengths. Spatial variation in slope and aspect is therefore a key determinant of vegetation pattern, species distribution and ecosystem processes in many environments. Slope and aspect angle may vary considerably over distances of a few metres, and fine-scale species’ distribution patterns frequently follow these topographic patterns. The availability of suitable microclimate at such scales may be critical for the response of species distributions to climatic change at much larger spatial scales. However, quantifying the relevant microclimatic gradients is not straightforward, as the potential variation in solar radiation flux under clear-sky conditions is modified by local and regional variations in cloud cover, and interacts with long-wave radiation exchange, local meteorology and surface characteristics.     

Is bird song a reliable signal of aggressive intent?

In this commentary, we discuss recent experiments on the reliability of bird song as a signal of aggressive intent during territorial conflicts. We outline relevant theoretical views on honest signaling, highlighting the vulnerability handicap hypothesis as a possible explanation for soft song’s reliability in predicting attack. We also sketch possible methods of testing whether soft song agrees with key predictions of the vulnerability handicap hypothesis. Finally, we suggest possible empirical refinements that may be useful in future studies of signals of intent, both in birds and in animals broadly. In particular, we argue that future studies of intent should strive to incorporate the following elements into their experimental design: (1) multi-modal signal components, (2) interaction dynamics, and (3) minimal time intervals. Simulated exchanges using dynamically interactive models may provide a powerful means of incorporating all three of these design features simultaneously.

Rainfall and soils modify plant community response to grazing in Serengeti National Park

Terrestrial plant community responses to herbivory depend on resource availability, but the separate influences of different resources are difficult to study because they often correlate across natural environmental gradients. We studied the effects of excluding ungulate herbivores on plant species richness and composition, as well as available soil nitrogen (N) and phosphorus (P), across eight grassland sites in Serengeti National Park (SNP), Tanzania. These sites varied independently in rainfall and available soil N and P. Excluding herbivores decreased plant species richness at all sites and by an average of 5.4 species across all plots. Although plant species richness was a unimodal function of rainfall in both grazed and ungrazed plots, fences caused a greater decrease in plant species richness at sites of intermediate rainfall compared to sites of high or low rainfall. In terms of the relative or proportional decreases in plant species richness, excluding herbivores caused the strongest relative decreases at lower rainfall and where exclusion of herbivores increased available soil P. Herbivore exclusion increased among-plot heterogeneity in species composition but decreased coexistence of congeneric grasses. Compositional similarity between grazed and ungrazed treatments decreased with increasing rainfall due to greater forb richness in exclosures and greater sedge richness outside exclosures and was not related to effects of excluding herbivores on soil nutrients. Our results show that plant resources, especially water and P, appear to modulate the effects of herbivores on tropical grassland plant diversity and composition. We show that herbivore effects on soil P may be an important and previously unappreciated mechanism by which herbivores influence plant diversity, at least in tropical grasslands.