Use of EST database markers from M. truncatula in the transferability to other forage legumes

In general tropical forage legumes lack microsatellites or simple sequence repeat (SSR) markers. Development of genic SSR markers from expressed sequence tagged (EST) database is an alternate and efficient approach to generate the standard DNA markers for genome analysis of such crop species. In the present paper a total of 816 EST-SSRs containing perfect repeats of mono (33.5%), di (14.7%), tri (39.3%), tetra (2.7%), penta (0.7%) and hexa (0.4%) nucleotides were identified from 1,87,763 ESTs of Medicago truncatula. Along with, 70 (8.5%) SSRs of a compound type were also observed. Seven primer pairs of tri repeats were tested for cross transferability in 19 accessions of forage legumes comprising 11 genera. At two different annealing temperatures (55 and 60 degreesC) all primer pairs except AJ410087 reacted with many accessions of forage legumes. Atotal of 51 alleles were detected with six M. truncatula EST-SSRs primer-pairs against DNAfrom 19 accessions representing 11 genera where number of alleles ranged from 2 to 13. The cross-transferability of these EST-SSRs was 40.6% at 55 degreesC and 32.3% at 60 degreesC annealing temperature. 24 alleles of the total 50 (48%) at 55 degreesC and 27 of 51 (53%) at 60 degreesC were polymorphic among the accessions. These 27 polymorphic amplicons identified could be used as DNA markers. This study demonstrates the developed SSR markers from M. truncatula ESTs as a valuable genetic markers and also proposes the possibility of transferring these markers between species of different genera of the legumes of forage importance. It was evident from the results obtained with a set of Desmanthus virgatus accessions where SequentialAgglomerative Hierarchical and Nested (SAHN) cluster analysis based on Dice similarity and Unweighted Pair Group Method with Arithmetic mean Algorithm (UPGMA) revealed significant variability (24 to 74%) among the accessions. High bootstrap values (>30) supported the nodes generated by dendrogram analysis of accessions.     

Prevalence and severity of dental fluorosis in relation to fluoride in ground water in the villages of Birbhum district, West Bengal, India

In relation to fluoride in ground water, dental fluorosis is studied in seven villages, viz., Nasipur, Vabanandapur, and Deshnabagram under Nalhati I block and Kamdebpur, Chalk Atla, Nowapara, and Junitpur under Rampurhat II block, of Birbhum district, West Bengal, India. Water samples (N = 70) were collected from the tube wells of the mentioned villages in the months of December 2010 to February 2011 and analyzed for fluoride and other water parameters. The study result revealed that the fluoride levels of almost all the water samples (95.7%) were higher than 1.5 mg/L, with mean values of 3.15 and 3.83 mg/L in Nalhati I block and Rampurhat II block, respectively. Dental fluorosis of 490 respondents was visually determined by a competent dentist using Dean’s index (DI) and the tooth surface index of fluorosis (TSIF). According to the DI, the percentage of severely affected respondents was lowest in Chalk Atla (0%) and highest in Deshnabagram (50%). The percentage of severely affected respondents was lowest in Kamdebpur and Chalk Atla (0%) and highest in Nowapara (20%) according to the TSIF score. The age group 10–20 years showed the highest percentage of severe DI (40.8%) and the age group 21–30 years showed the highest percentage of severe TSIF (22.51%) compared to the other age groups in the study. The positive relationship between the fluoride level in water and the severity of dental fluorosis has been proved statistically. The high mean score of dental fluorosis indicates that dental fluorosis is endemic throughout the study area.     

Forecasts using Box–Jenkins models for the ambient air quality data of Delhi City

The monthly maximum of the 24-h average time-series data of ambient air quality-sulphur dioxide (SO(2)), nitrogen dioxide (NO(2)) and suspended particulate matter (SPM) concentration monitored at the six National Ambient Air Quality Monitoring (NAAQM) stations in Delhi, was analysed using Box-Jenkins modelling approach (Box et al. 1994). Univariate linear stochastic models were developed to examine the degree of prediction possible for situations where only the past record of pollutant data are available. In all, 18 models were developed, three for each station for each of the respective pollutant. The model evaluation statistics suggest that considerably satisfactory real-time forecasts of pollution concentrations can be generated using the Box-Jenkins approach. The developed models can be used to provide short-term, real-time forecasts of extreme air pollution concentrations for the Air Quality Control Region (AQCR) of Delhi City, India.     

Activated carbon from Ceiba pentandra hulls, an agricultural waste, as an adsorbent in the removal of lead and zinc from aqueous solutions

The ability of low-cost activated carbon prepared from Ceiba pentandra hulls, an agricultural waste material, for the removal of lead and zinc from aqueous solutions has been investigated. In the batch tests experimental parameters were studied, including solution pH, contact time, adsorbent dose and initial metal ions concentration. The adsorbent exhibited good sorption potential at pH 6.0. Maximum removal of lead (99.5%) and of zinc (99.1%) with 10 g/l of sorbent was observed at 50 mg/L sorbate concentration. Removals of about 60-70% occurred in 10 min, and equilibrium was attained at around 50 min for both metals. The functional groups (CO, SO,-OH) present on the carbon surface were responsible for the adsorption of metal ions. The adsorption parameters were analysed using both the Freundlich and Langmuir models. The data are better fitted by the Freundlich isotherm as compared to Langmuir model, and the adsorption capacities for lead and zinc were 25.5 and 24.1 mg/g, respectively. Kinetics of adsorption obeyed a second order rate equation and the rate constant was found to be 2.71 x 10(-2) and 2.08 x 10(-2) g/mg/min for lead and zinc, respectively. The desorption studies were carried out using dilute HCl, and the effect of HCl concentration on desorption was studied. Maximum desorptions of 85% for lead and 78% for zinc were attained with 0.15 M HCl.     

Allelopathic response of <Emphasis Type="Italic">Vetiveria zizanioides</Emphasis> (L.) Nash on members of the family Enterobacteriaceae and <Emphasis Type="Italic">Pseudomonas</Emphasis> spp.

The biological removal of phosphates was carried as a part of treatment strategy. Vetiveria zizanioides (L.) Nash belonging to the family Poaceae was used for biological removal of biostimulants. Vetiver reportedly has mycorrhizal association; besides having potential for removal of PO₄ ⁻³ also showed allelopathic affect on the microorganisms present in the water. In fact after a period of 96 h old roots of this plant have been found to have killing effects on the E. coli, Enterobacter spp. Pseudomonas spp. belonging to the family Enterobacteriaceae. The paper is opening a new face of study.     

Genetic diversity in some perennial plant species with-in short distances

Distinct morphophysiological variations observed for over 2 years with-in short distances among four perennial plants indicated genetic diversity among the lines growing at three places. The isozyme and SDS polyacrylamide gel banding patterns as genetic markers were used to investigate four perennial species, namely Dalbergia sissoo Roxb., Delonix regia (Boj.) Refin., Cassia fistula L. and Calotropis procera R. Br. Plant materials collected from three locations (Agra, Gwalior and Lucknow) differing in climo-edaphic variables were examined for 4 enzyme systems, viz., esterase, polyphenol oxidase, peroxidase and superoxide dismutase (EST, PPO, PRX and SOD). Among the four isozymes SOD and PRX revealed best discriminating power. Protein banding patterns as well as zymogram revealed that Dalbergia sissoo growing at Gwalior was closer to that of Agra; Delonix regia depicted highest similarity between Lucknow and Agra and Calotropis procera of Lucknow location was more closer to Gwalior than Agra. The results confirm genetic diversity in the species as a means of adaptation to differing climo-edaphic variables.     

Loss of crop yields in India due to surface ozone: an estimation based on a network of observations

Surface ozone is mainly produced by photochemical reactions involving various anthropogenic pollutants, whose emissions are increasing rapidly in India due to fast-growing anthropogenic activities. This study estimates the losses of wheat and rice crop yields using surface ozone observations from a group of 17 sites, for the first time, covering different parts of India. We used the mean ozone for 7 h during the day (M7) and accumulated ozone over a threshold of 40 ppbv (AOT40) metrics for the calculation of crop losses for the northern, eastern, western and southern regions of India. Our estimates show the highest annual loss of wheat (about 9 million ton) in the northern India, one of the most polluted regions in India, and that of rice (about 2.6 million ton) in the eastern region. The total all India annual loss of 4.0–14.2 million ton (4.2–15.0%) for wheat and 0.3–6.7 million ton (0.3–6.3%) for rice are estimated. The results show lower crop loss for rice than that of wheat mainly due to lower surface ozone levels during the cropping season after the Indian summer monsoon. These estimates based on a network of observation sites show lower losses than earlier estimates based on limited observations and much lower losses compared to global model estimates. However, these losses are slightly higher compared to a regional model estimate. Further, the results show large differences in the loss rates of both the two crops using the M7 and AOT40 metrics. This study also confirms that AOT40 cannot be fit with a linear relation over the Indian region and suggests for the need of new metrics that are based on factors suitable for this region.     

Environmental and agronomic implications of water table and nitrogen fertilization management

Nitrate (NO3-) pollution of surface and subsurface waters has become a major problem in agricultural ecosystems. Field trials were conducted from 1996 to 1998 at St-Emmanuel, Quebec, Canada, to investigate the combined effects of water table management (WTM) and nitrogen (N) fertilization on soil NO3- level, denitrification rate, and corn (Zea mays L.) grain yield. Treatments consisted of a combination of two water table treatments: free drainage (FD) with open drains at a 1.0-m depth from the soil surface and subirrigation (SI) with a design water table of 0.6 m below the soil surface, and two N fertilizer (ammonium nitrate) rates: 120 kg N ha(-1) (N120) and 200 kg N ha(-1) (N200). Compared with FD, SI reduced NO3(-)-N concentrations in the soil profile by 37% in spring 1997 and 2% in spring 1998; and by 45% in fall 1997 and 19% in fall 1998 (1 mg NO3(-)-N L(-1) equals approximately 4.43 mg NO3- L(-1)). The higher rate of N fertilization resulted in greater levels of NO3(-)-N in the soil solution. Denitrification rates were higher in SI than in FD plots, but were unaffected by N rate. The N200 rate produced higher yields than N120 in 1996 and 1997, but not 1998. Corn yields in SI plots were 7% higher than FD plots in 1996 and 3% higher in 1997, but 25% lower in 1998 because the SI system was unable to drain the unusually heavy June rains, resulting in waterlogging. These findings suggest that SI can be used as an economical means of reducing NO3- pollution without compromising crop yields during normal growing seasons.     

Emissions from burning biofuels in metal cookstoves

Promoting stoves that burn wood and other biofuels more efficiently is one of the means to reduce fuel consumption, but such efficient stoves may also emit more carbon monoxide and total suspended particulates. In an earlier study, a standard chamber method was proposed to estimate emission factors from burning fuelwood (Acacia nilotica). Here that methodology is extended to measure emission factors from burning of dungcakes and crop residues (Brassica or mustard stalks)—common fuels in many developing countries. The amounts of carbon monoxide (CO) and total suspended particulates (TSP) emitted by four different models of stoves, when using each of the three biofuels, are measured.The CO emission factors range from 13–68 (g/kg) for fuelwood to 26–67 g/kg for dungcakes and 20–114 g/kg for crop residues, for particulates they range from 1.1–3.8 to 4.1–7.8 and 2.1–12.0 g/kg for the three fuels, respectively. On a per unit heat delivered basis, the emissions of CO and TSP from both dungcakes and crop residues are two to three times higher compared to those from fuelwood. While for some improved stove-fuel combinations, the increase in emission factors was offset by the increase in thermal efficiency, this was not always so and causes a dilemma. The more efficient stoves are found to have higher emission factors of both CO and TSP for all three fuels. Emissions per standard task (i.e, on a unit heat delivered basis) is proposed as a criterion to evaluate cookstoves.