Phylogeographic study of the dwarf oyster, Ostreola stentina, from Morocco, Portugal and Tunisia: evidence of a geographic disjunction with the closely related taxa, Ostrea aupouria and Ostreola equestris

Despite the economic importance of oysters due to the high aquaculture production of several species, the current knowledge of oyster phylogeny and systematics is still fragmentary. In Europe, Ostrea edulis, the European flat oyster, and Ostreola stentina, the Provence oyster or dwarf oyster, are both present along the European and African, Atlantic and Mediterranean, coasts. In order to document the relationship not only between O. stentina and O. edulis, but also with the other Ostrea and Ostreola species, we performed a sequence analysis of the 16S mitochondrial fragment (16S rDNA: the large subunit rRNA-coding gene) and the COI fragment (COI: cytochrome oxidase subunit I). Oysters were sampled from populations in Portugal (two populations), Tunisia (two populations) and Morocco (one population), identified as O. stentina on the basis of shell morphological characters. Our data supported a high degree of differentiation between O. stentina and O. edulis and a close relationship between O. stentina and both Ostrea aupouria (from New Zealand) and Ostreola equestris (from Mexico Gulf/Atlantic). The status of this geographic disjunction between these closely related species is discussed. Furthermore, although identified in a separate genus Ostreola by Harry (Veliger 28:121–158, 1985), our molecular data on O. stentina, together with those available for the other two putative congeneric species, O. equestris and Ostreola conchaphila, would favour incorporation of Ostreola in Ostrea. Finally, a PCR-RFLP approach allowed the rapid identification of O. edulis and O. stentina.     

Fate of the veterinary medicine ivermectin in soil

We investigated the fate of the drug ivermectin in the soil. We found that ivermectin was transformed solely by photos, leading to the formation of two ivermectin isomers. We indeed failed to detect any biotransformation reaction of the chemical either in the soil or in fungal liquid cultures. According to its limited water solubility, the bioavailability of ivermectin was very low in the soil solution. Here, we show that ivermectin, transferred to the soil from faeces of drug-treated cattle, could be stored for long periods in the soil.     

Spectroscopic tools for remote sensing of greenhouse gases CH<Subscript>4</Subscript>, CF<Subscript>4</Subscript> and SF<Subscript>6</Subscript>

Highly symmetrical molecules such as CH₄, CF₄ or SF₆ are known to be atmospheric pollutants and greenhouse gases. High-resolution spectroscopy in the infrared is particularly suitable for the monitoring of gas concentration and radiative transfers in the earth's atmosphere. This technique requires extensive theoretical studies for the modeling of the spectra of such molecules (positions, intensities and shapes of absorption lines). Here, we have developed powerful tools for the analysis and the simulation of absorption spectra of highly symmetrical molecules. These tools have been implemented in the spherical top data system (STDS) and highly-spherical top data system (HTDS) software available at http://www.u-bourgogne.fr/LPUB/shTDS.html. They include a compilation of modeled data obtained during the last 20 years. An overview of our latest results in this domain will be presented. Electronic Publication     

Environmental control and spatial structure in ecological communities: an example using oribatid mites (Acari,Oribatei)

We have recently proposed to use partial canonical ordinations to partition the variation of species abundance data into four additive components: environmental at a local scale, the spatial component of the environmental influence, pure spatial, and an undetermined fraction. By means of an example, we show how to use the information contained in these fractions to provide better insight into the data. In particular, the interpretation is assisted by separately mapping the various canonical axes and relating them to possible generating processes. We derive a general framework for the causal interpretation of the various fractions of this partition, which includes the environmental and the biotic control models, as well as historical dynamics.Daniel Borcard is research associate in animal ecology at Universite de Neuchâtel, Switzerland. He is interested in soil ecology, and presently working on fundamental and applied projects dealing with peat bog ecology and protection, community succession dynamics, as well as effects of agriculture on mite and insect communities. In order to develop the statistical tools necessary for these projects, he also works in collaboration with Pierre Legendre on modeling the spatial structure of ecological communities. $Pierre Legendre is professor of quantitative biology at Universite de Montreal. He is a former Killam Research Fellow (1989–91), and a member of the Royal Society of Canada since 1992. He is the author of some 100 refereed articles, over 250 papers presented at scientific meetings and research seminars, dealing with numerical ecology, community ecology, environmental assessment and spatial analysis, and textbooks (in French and English) on numerical ecology. During the past 5 years, he served as the Secretary-Treasurer of the International Federation of Classification Societies. *We thank Dr V.M. Behan-Pelletier, of Agriculture Canada, for her help in the identification of the Oribatid mites, and Mrs Lucie Fortin and Dr P. Neumann, Universite de Montreal, for their identifications of the Sphagnum species. This research was carried out during tenure of a Postdoctoral Fellowship of the Swiss National Foundation for Scientific Research by D. Borcard, and of a Killam Research Fellowship of the Canada Council by P. Legendre. It was also supported by NSERC grant No. A7738 to P. Legendre. This is contribution No. 392 of the Groupe d'Écologie des Eaux douccs, Universite de Montreal. The authors wish to dedicate this paper with gratitude to Mr Alain Vaudor, computer analyst in Pierre Legendre's laboratory, who has largely contributed to the planning of this research. Mr Vaudor passed away on October 31, 1991, at age 46. The package for multivariate and spatial data analysis that he has produced during his computer scientist career is available to researchers from P. Legendre.     

Prenatal diagnosis of trisomy 8 mosaicism in cvs after abnormal ultrasound findings at 12 weeks

We describe a case of trisomy 8 mosaicism in which fetal chromosome analysis was prompted by ultrasound abnormalities, i.e., hygroma colli and dilatation of the renal pelves. Chorionic villus sampling (CVS) was performed, with a false-negative result on direct karyotype analysis, although cultured trophoblasts revealed trisomy 8 mosaicism. Fetal autopsy confirmed the abnormalities found on ultrasound examinations and fetal tissue examination showed different levels of trisomy 8 mosaicism. To our knowledge, this is the first prenatal diagnosis of trisomy 8 made on ultrasound findings.     

Comportement photochimique du nitro-4 phenol en solution aqueuse

The quantum yield of the phototransformation of 4-nitrophenol has been evaluated as 4.5×10⁻⁵±0.6×10⁻⁵ at pH=2; at 3.0×10⁻⁵±0.6×10⁻⁵ at pH=5.5; 1.8×10⁻⁵±0.5×10⁻⁵ at pH=8.3. However the half-life is relatively low and no accumulation of aromatic or quinonic products was observed. Hydroquinone (QH₂) is the main organic primary product formed when an air-saturated or degassed solution was irradiated in 365 nm monochromatic light (about 80% of the 4-nitrophenol initially converted at pH=5.5 in the absence of oxygen). In air-saturated neutral or acidic solution, the formation of NO⁻₃ ions accounted for about 80% of the 4-nitrophenol converted, but in degassed medium a mixture NO : NO⁻₂ : NO⁻₃ is formed. An heterolytical mechanism of photohydrolysis with primary formation of QH₂ and HNO₂ is suggested. Several by-products as benzoquinone, 4-nitrosophenol, 4-nitrocatechol and nitrohydroquinone are formed according to the conditions. Many secondary reactions are involved as the disproportionation or the oxidation of HNO₂, the oxidation of QH₂ by HNO₂ and oxidations induced by excitation of NO⁻₂ and NO⁻₃.     

Between introgression events and fragmentation, islands are the last refuge for the American crocodile in Caribbean Mexico

Habitat loss and degradation in the Mexican Caribbean, caused by the development of tourism, have decreased the potential nesting area for the American crocodile (Crocodylus acutus) and have fragmented the populations of the Yucatan peninsula. Our study investigated five populations (three continental: North, South, Sian Ka’an, and two insular: Cozumel, Banco Chinchorro) of C. acutus in the Mexican Caribbean using seven different inter simple sequence repeat (ISSR) markers as tools for genetic variability and population differentiation. Three classification methods were tested and compared: distance analysis, self-organizing map, and Bayesian methods, to evaluate the resolution of each method with ISSR markers. The 77 loci selected revealed a high variability between populations (polymorphism from 17% for Sian Ka’an to 75% for Banco Chinchorro) with a total polymorphism of 84% and a global coefficient of gene differentiation (G _ST ) of 0.296, but low values of Nei’s Gene diversity (from 0.065 for Sian Ka’an to 0.233 for Banco Chinchorro). Our results suggest elevated inbreeding in all local populations with higher indices for Banco Chinchorro and lower indices for Sian Ka’an. Three independent classification methods gave similar results, and suggested that most continental individuals are admixtures, with different levels of introgression, with the sympatric species Crocodylus moreletii. We propose that the islands/atolls remain the sole areas with genetically “pure” American crocodiles and we discuss these results for future conservation of this endangered crocodile species.