Assessing the Geographic Representativeness of Genebank Collections: the Case of Bolivian Wild Potatoes

Abstract: Genebank collection databases can be used for ecogeographical studies under the assumption that the accessions are a geographically unbiased sample. We evaluated the representativeness of a collection of wild potatoes from Bolivia and defined and assessed four types of bias: species, species-area, hotspot, and infrastructure. Species bias is the sampling of some species more often than others. Species-area bias is a sampling that is disproportionate to the total area in which a species is found. Hotspot bias is the disproportionate sampling of areas with high levels of diversity. Infrastructure bias is the disproportionate sampling of areas near roads and towns. Each of these biases is present in the Bolivian wild potato collection. The infrastructure bias was strong: 60% of all wild potato accessions were collected within 2 km of a road, as opposed to 22%, if collections had been made randomly. This analysis can serve as a guide for future collecting trips. It can also provide baseline information for the application of genebank data in studies based on geographic information systems.     

Latitudinal variation in the reproductive biology of the burrowing ghost shrimp Callianassa filholi (Decapoda: Thalassinidea)

Population structure and reproductive ecology of the burrowing ghost shrimp Callianassa filholi Milne-Edwards, 1878 were studied in populations along a latitudinal gradient throughout New Zealand during the breeding season. Size-frequency distributions revealed unimodal populations, with predominantly sexually mature shrimp. All populations showed an unbiased sex-ratio, and there appeared to be no significant difference in size (carapace length, CL) between sexes. At the same time, CL and size at maturity differed significantly between populations; however, a general increase in sizes from north to south was not consistent throughout the latitudinal range studied. The timing of the breeding cycle differed significantly between populations, and breeding started earlier in southern populations. Number of embryos (fecundity) increased linearly with female CL at each location, but rates differed significantly between populations. Embryo size was not related to number of embryos, and the former increased significantly with latitude. With the exception of embryo size, observed differences in body size/size at maturity and reproductive timing between C. filholi populations are thought to be determined by food availability rather than temperature. Thus, further study is suggested on these aspects of thalassinid reproductive biology. Received: 17 June 1999 / Accepted: 8 January 2000     

Patterns of time and space utilisation in coelacanths (Latimeria chalumnae), determined by ultrasonic telemetry

Acoustic telemetry was used to examine patterns of activity and space utilisation of coelacanths, nocturnal predators which spend the day in submarine caves. Nine coelacanths (Latimeria chalumnae) were tracked, each for a period of 1 to 16 nights at Grande Comore, West Indian Ocean. Activities lasted on average 9 h, usually starting shortly after sunset and ending before sunrise. Vertically, coelacanths moved up and down at and below cave level by following the bottom contour, mainly between 180 and 400 m depth. The deepest record was 698 m, the shallowest 133 m. Most time was spent between 200 and 300 m depth. Large individuals performed deep excursions to depths below 400 m, usually once per night. The fish spent most time in water temperatures of 15 to 19 °C; they rarely ventured into waters warmer than 22 °C measured at depths shallower than 160 m depth. Horizontally, coelacanths stayed in narrow areas ranging from <1 to 10 km of coastline. Coelacanths are extremely slow drift-hunters with an estimated average swimming speed of 3.2 m min⁻¹, often travelling not more than 3 km per night. They probably take advantage of local upwelling and downwelling and slow currents occurring parallel to the steep slopes. This study shows that coelacanths are inhabitants of the subphotic zone, where they are active mainly below the depth of their daytime refuges. Received: 7 July 1999 / Accepted: 11 February 2000     

Short retention times of stomach temperature loggers in free-living seabirds: is there hope in the spring?

Stomach temperature loggers have proved useful for the study of feeding activity in free-living seabirds, but their usage has been restricted because they are frequently dislodged and lost during the seabirds' regular regurgitation of indigestible prey remains. In the present study we examine the incidence of spontaneous regurgitation (pellet production) in free-living seabirds, consider the effect this has on the likely retrieval of stomach temperature loggers and present a structural modification of the logger housings which leads to a much lower incidence of regurgitation. Systems were tested on albatrosses, cormorants, gannets and penguins. Received: 15 July 1997 / Accepted: 31 October 1997     

Feeding in myodocopid ostracods: functional morphology and laboratory observations from videos

High-resolution videos, scanning electron microscopy and histology were used to study the feeding mechanism of myodocopid ostracods from the Pacific Coast of Japan, as exemplified by Vargula hilgendorfii (Müller, 1890) and a few other cypridinid species. Ostracods observed in the laboratory were attracted to a wide spectrum of natural food sources, behaving as predators of living prey (e.g. polychaete annelids), as opportunistic scavengers on dead animals (e.g. annelids, fishes, squid), and also consuming artificial food. Food sources may be detected by chemoreception. The fourth limb (endopodites with strong sclerotized setae) and the furcal lamellae (claws with teeth) act in coordination to abrade and eventually tear open the protective integument of living/dead prey such as annelids. The mandibular palps are used mainly to hold the food. Food sections and soft-body contents are transferred to the mouth by the fourth limb (endopodial “rake”) and fifth limb (exopodite with pectinate setae) and are passed to the oesophagus by the endites (mandibles, fourth and fifth limbs). Food is subsequently pumped up to the stomach by peristaltic contractions of the oesophagus (ring muscles) and stored in the stomach pouch. The upper lip of bioluminescent (V. hilgendorfii) and non-bioluminescent species of Cypridinidae often contact food, suggesting that some of the glands housed in this organ may emit digestive enzymes prior to ingestion. Ostracods are able to ingest massive quantities of food within a few minutes and to survive starvation for several weeks. In V. hilgendorfii, the midgut is a huge sac-like organ with no partition and is lined with a single layer of columnar epithelial cells. No differentiated hepatopancreas is present. The cypridinid produces a single faecal pellet wrapped in a thin reticulated, peritrophic membrane. Myodocopid ostracods exhibit a wide range of feeding strategies (detritus-feeding, comb-feeding, scavenging, predation, ectoparasitism) in both benthic and pelagic niches, and constitute a substantial source of food for many zooplankters. Adaptation of cypridinids to scavenging/predation is reflected in the morphology of their furcae, mandibles, fourth and fifth limbs, and their digestive system. Palaeontological data suggest that early Triassic cypridinids and possible late Ordovician myodocopids may have been carnivorous scavengers feeding on carcasses of cephalopods (ammonoids or orthoconic nautiloids), thus playing the same role of “recyclers” as modern representatives of the group. Received: 2 January 1998 / Accepted: 23 July 1998     

A correction to: biological and oceanographic insights from larval labrid (Pisces: Labridae) identification using mtDNA sequences

Previously published mtDNA cytochrome b sequences for Xyrichtys novacula (Linnaeus) and two morphologically distinct types of Xyrichtys larvae (Pisces: Labridae) included human cytochrome b sequence, presumably due to sample contamination and/or poor preservation of sample DNA. Those sequences had been used to identify the two types of Xyrichtys larvae as X. novacula, but owing to the contamination, the identifications are invalid. Fresh specimens were collected: X.␣martinicensis (Cuvier and Valenciennes), X. novacula, X. splendens (Castelnau), and Xyrichtys sp. larvae of each of the two morphotypes (dorsal-forward eye and ventral-forward eye). The cytochrome b fragment was amplified from each specimen using the polymerase chain reaction. Comparison of the sequences with human cytochrome b sequence confirmed that the new sequences were not contaminated. The interspecific differences in Xyrichtys sequences were less than previously reported, but still greater than observed in many fish genera. Distance and parsimony analyses indicated that X. novacula and X. martinicensis were more closely related to each other than to X. splendens. This conclusion differs from our previous conclusion that X. martinicensis and X. splendens were more closely related to each other than to X. novacula. Distance and parsimony analyses also demonstrated that both larval morphotypes were X. novacula and, thus, our previous conclusions regarding larval ecology and oceanographic transport remain unchanged. Received: 12 March 1997 / Accepted: 24 October 1997     

Spawning behaviour and sex hormone levels in adult and precocious brown trout (Salmo trutta L.) males and the effect of anosmia

Summary. In the present experiment the behaviour and endocrine status of males of the brown trout, Salmo trutta L., (Salmoniformes: Salmonidae) were studied when males were kept in a stream tank with a nest digging female. Groups of mature adult males and precocious intact or anosmic male parr were placed with the nesting female so that the group resembled a natural spawning situation with big anadromous fish acting as dominant males and precocious parr acting as “sneakers”. A control experiment was also run with only males without a female present. In intact parr there were significant positive correlations between the per cent of the total observation time spent with a female, milt volume, and plasma concentration of 17α, 20β-dihydroxy-4-pregnen-3-one. Anosmic parr had significantly lower volumes of strippable milt and gonadal steroid hormone levels compared with intact parr. However, no differences were found in the control experiment. Significantly fewer anosmic parr attended and courted the nesting female and those anosmic fish that attended the female had significantly lower plasma levels of gonadal hormones. Intact parr also displayed a greater number of agonistic acts against other parr without any difference in fighting ability. No differences in aggression occured in the control experiment. In adult males together with a female, post-experimental gonadal steroid hormone levels were higher than pre-experimental levels. Positive correlations between aggression and androgen hormone levels were observed in adult males. No differences in plasma hormone levels were observed between adult males and intact precocious males. The results show that olfactory occlusion results in low steroid hormone levels and milt volumes in precocious males placed in a spawning situation. The courting behaviour was also affected by anosmia. Odours from the nesting female may have caused the enhanced plasma hormone levels and stimulated the males to attend the female. Received 15 May 1997; accepted 29 June 1997.     

Mode choice model for vulnerable motorcyclists in Malaysia

OBJECTIVE: In developing countries, motorcycle use has grown in popularity in the past decades. Commensurate with this growth is the increase in death and casualties among motorcyclists in these countries. One of the strategic programs to minimize this problem is to reduce motorcyclists exposure by shifting them into safer modes of transport. This study aims to explore the differences in the characteristics of bus and motorcycle users. It identifies the factors contributing to their choice of transport mode and estimates the probability that motorcyclists might change their travel mode to a safer alternative; namely, bus travel. METHODS: In this article, a survey of 535 motorcycle and bus users was conducted in seven districts of Selangor state, Malaysia. A binary logit model was developed for the two alternative modes, bus and motorcycle. RESULTS: It was found that travel time, travel cost, gender, age, and income level are significant in influencing motorcyclists' mode choice behavior. The probability of motorcycle riders shifting to public transport was also examined based on a scenario of a reduction in bus travel time and travel cost. CONCLUSIONS: Reduction of total travel time for the bus mode emerges as the most important element in a program aimed at attracting motorcyclists towards public transport and away from the motorcycle mode.     

Characteristics of large cooking oil pool fires and their extinguishment by water mist

Large cooking oil pool fires, occurring in industrial oil cookers, present a severe hazard to food processing plants due to their size and the large amount of hot oil involved. This paper reports a series of full-scale fire experiments conducted in a large industrial oil cooker mock-up. The characteristics of large cooking oil pool fires and the effect of oil depth and hood position in the oil cooker on fire growth were studied. The use of water mist for extinguishing large oil pool fires and their extinguishing performance under different discharge pressure and with different types of water mist systems were investigated. Experimental results showed that the cooking oil underwent a substantial expansion in volume during heating. The fires developed quickly once the oil auto-ignited. The fire growth rate was affected by the oil depth in the pan and the hood position in the oil cooker. The water mist fire suppression systems effectively extinguished large cooking oil fires and prevented them from re-igniting. Their extinguishing performance was determined by the type of water mist system, discharge pressure and hood position in the oil cooker.