Characterisation, dissemination and persistence of gentamicin resistant Escherichia coli from a Danish university hospital to the waste water environment

The aim of the study was to investigate the potential spread of gentamicin resistant (GEN(R)) Escherichia coli isolates or GEN(R) determinants from a Danish university hospital to the waste water environment. Waste water samples were collected monthly from the outlets of the hospital bed wards and the inlet of the related waste water treatment plant (WWTP) from October 2002 to August 2003. Waste water samples were also collected monthly from a residential area in the same period to be able to compare the prevalence of GEN(R)E. coli isolates from hospital related and residential waste water. The waste water isolates were compared to GEN(R)E. coli isolates obtained consecutively from September 2002 to September 2003 from patients mainly with urinary tract infections at the hospital with respect to Pulsed Field Gel Electrophoresis (PFGE) profiles. All isolates were investigated for GEN(R) mechanisms (aac(3)-II, aac(3)-IV, ant(2')-I, armA), phenotypic resistance pattern, and virulence genes (hlyA, chuA, sfaS, fogG, malX, traT, iutA, fyuA, iroN, cnf1) to investigate if the hospital and waste water could be reservoirs of antimicrobial resistance and virulence. The ability for GEN(R) determinants to transfer horizontally was investigated by mating experiments. A total of 38, 15, 21, and two GEN(R)E. coli were isolated from patients, the hospital outlets, the inlet of the WWTP, and the residential area, respectively. GEN(R)E. coli were more prevalent in waste water from the hospital and the WWTP than in waste water from the residential area. PFGE profiling revealed no spread of specific patient isolates to the waste water. The aac(3)-II gene was detected both in patient and waste water isolates. Furthermore horizontal transfer of the aac(3)-II gene of patient origin to a recipient was shown in vitro, indicating a potential spread of the gene from patient isolates to waste water isolates. Regardless of origin, most isolates exhibited multi-resistance and contained several virulence genes. In conclusion, our study showed a possible spread of aac(3)-II from the hospital to the waste water. Most of the GEN(R)E. coli isolates from both patients and waste water had a multi-resistant phenotype and contained virulence genes and should therefore be considered reservoirs of antimicrobial resistance and virulence genes.     

Modeling the effects of concentration history on the slow desorption of trichloroethene from a soil at 100% relative humidity

To determine the effects of concentration history on slow sorption processes, desorption kinetic profiles for trichloroethene (TCE) were measured for a soil at 100% relative humidity subject to different exposure concentrations and exposure times. Exposure concentrations ranged from 1% to 80% of the saturation vapor pressure (Ps) for TCE, and exposure times (i.e., time allowed for sorption before desorption begins) ranged from 1 to 96 days. A spherical diffusion model based on a gamma distribution of sorption rates and a gamma distribution of desorption rates was developed and applied to the data. At 80% P/Ps, the entire gamma distributions of sorption and desorption rates were available for TCE. In accordance with a micropore filling mechanism, the fraction of these distributions available for TCE sorption decreased with decreasing P/Ps. Experimental results are consistent with a micropore-filling mechanism, where the amount of slow desorbing mass decreased with decreasing exposure time, and the fraction of slow desorbing sites filled decreased with decreasing exposure concentration. Simulation results suggest that diffusion limits the rates that micropores fill, and that rates of sorption and desorption for soil contaminated at smaller values of P/Ps are, on average, less than those at larger values of P/Ps (i.e., slow desorption rates are a function of exposure concentration). Simulation results also suggest that the model adequately describes the effects of exposure concentration and exposure time on the rates of sorption and desorption, but not on the capacity of the slow sites for TCE. This work is important because contaminant concentrations in the subsurface vary in space and time, and the proposed model represents a new and mechanistically based approach to capture the effects of this heterogeneity on slow desorption.     

Marine Organisms as Indicators of Heavy Metal Pollution-Experience from 16 Years of Monitoring at a Lead Zinc Mine in Greenland

In monitoring the impact of a lead-zinc mine in Greenland, species of fish, prawns, seaweed and mussels have been analysed for cadmium, copper, lead and zinc for several years. These metals have been released to the marine environment in significant amounts from the mining operation.     

PCB disposition and different biological effects in rats following direct soil exposure vs. PCBs off-gassed from the soil

A comparison of PCB congener profiles and limited biological effects was made between direct exposure to PCB-contaminated soil and vapor phase PCBs from that soil to determine congener patterns useful for identifying exposure sources in humans and wildlife. Weanling female Sprague–Dawley rats were exposed to either control or PCB-contaminated soil (from a landfill in Southern Illinois) for 1 and 2 weeks. The exposures were via direct contact with the soil or via airborne exposure with the rats isolated from the soil by a wire screen. Total PCB of 25% contaminated soil used in the study was 13?500?ppm. No PCBs were detectable in control rats. In direct-exposed rats, total PCB residues in fat pad, ear skin, serum, liver, and inguinal lymph nodes after the 1-week exposure were 6256, 185, 3.2, 149, and 41?ppm, respectively, but decreased to 465, 72, 1.7, 106, and 32.4?ppm after the 2-week exposure. In airborne-exposed rats, total PCB residues were 7.8, 1.6, 0.03, 0.2, and 0.6 in the same manner and slightly increased in fat pad and ear skin to 11.6 and 2.14, respectively. Decreases in both the concentrations and percentages of “episodic” PCBs (those congeners rapidly metabolized) in the fat pad were apparent following the 2-week exposure compared to the 1-week exposure by both routes. Both EROD and BROD activities were significantly increased in the direct-exposed rats, whereas only BROD activity increased in airborne-exposed rats. Serum T ₄ levels were depleted in the direct-exposed rats regardless of time of exposure but were increased insignificantly after 1-week and significantly after 2 weeks in the airborne-exposed rats. No significant changes in serum insulin levels were apparent in any of the treated groups. The results suggested that exposure of animals to PCBs via different routes could result in different PCB profiles, which could cause different biological effects.     

Sharing and preparing: cross-institutional,food security-based knowledge in Canada

This study proposes a framework for the collection and management of knowledge related to food security in Canada. This paper has several goals. First, the paper summarizes the current state of food security knowledge in Canada. Second, the paper presents data from an experiment where food security issues were discussed by stakeholders at two fora, the first of which was held in western Canada and the second held in eastern Canada. Finally, based on the notes taken during and feedback received after the fora, this paper suggests a framework for organizing and managing the multiple perspectives and complex types of knowledge about food security and sustainable development from a Canadian context. Two fora were held in Canada where food security issues were presented and discussed by multiple stakeholders. Most provinces in Canada were represented in at least one of the two sessions. Sessions were designed to be informative and interactive; agenda were designed to take advantage of the needs and experiences of multiple stakeholders in both western and eastern regions of Canada. To develop the framework, the sessions were also designed to assess the types of issues and knowledge about food security in Canada. Evidence presented from this experiment supports arguments that food security work must be approached in a collaborative manner, no matter the approach or discipline. Data from fora held in western and eastern regions of Canada indicate a number of specific ways in which those along the food continuum have the desire to share knowledge and enter into partnerships to work toward secure and sustainable food systems. Data also indicate how academia and institutions of higher learning might play a key role in sharing food security-based knowledge. The data from this study suggest that academia could play a leadership role in collecting and sharing information about food security-based knowledge from all disciplinary approaches that could help collaborative in addressing the complexity of food security challenges. The framework developed in this paper could provide the guide for organizing knowledge about food security and sustainable development. The framework could be used as a map to guide understanding about the different ways in which food security can be approached and understood; this could help reduce tensions among partners in projects where a wide variety of experiences are attempting to work collaboratively. The two food security fora brought together stakeholders with specialized knowledge about food security in a Canadian context. The analysis of data arising from the fora permitted unique insights to arise about the nature of knowledge by region. The data in this study also allowed us to build a framework for food security knowledge from these regional knowledge bases. This paper suggests that academia actively take a leadership role and openly share knowledge about food security. Open sharing of knowledge will help collaborates in dealing with complex food security issues understand in-depth other approaches; this sharing may help to make explicit the tensions that arise during collaborative work.     

Chaotic genetic patchiness and high relatedness of a poecilogonous polychaete in a heterogeneous estuarine landscape

The genetic structure of benthic marine invertebrates is often described as “chaotic” when genetic structure cannot be explained and barriers to dispersal and gene flow cannot be identified. Here, chaotic patterns of genetic structure for the polychaete Pygospio elegans (Claparède) sampled at 16 locations from the heterogeneous Isefjord–Roskilde Fjord estuary complex in Denmark were found. There was no isolation by distance, and the geography of the estuary complex did not seem to pose a barrier to dispersal and gene flow in this species. We investigated whether characteristics of the environment could be related to the genetic structure and possibly restrict gene flow in this species. Additionally, since P. elegans is poecilogonous, producing larvae with different pelagic developmental periods, we investigated whether observed developmental modes in the samples might clarify the genetic patterns. None of the tested factors explained the population genetic structure. However, a high degree of relatedness among individuals in almost all samples was found. Samples with a larger percentage of young individuals had more related individuals, suggesting that different cohorts could be comprised of individuals with different degrees of relatedness. Relatedness within a site could be increased by limited larval dispersal, collective dispersal of related larvae, sweepstakes reproductive success, or asexual reproduction, but distinguishing between these requires further study. Using a “seascape genetics” approach allowed us to investigate some of the numerous potential factors that could influence population genetic structure in a poecilogonous species.     

Effects of plant morphology on small-scale distribution of invertebrates

Habitat structure influences organism communities by mediating interactions between individuals and species, affecting abundance and species richness. We examined whether variations in the morphology of soft-bottom plants affect their function as habitat and whether complex structured plants support higher macroinvertebrate abundance and species richness. Three Baltic Sea plant species were studied, together with artificial plants resembling each species. In a field collection, we found higher invertebrate abundance on the morphologically more complex plants Myriophyllum spicatum and Chara baltica than on the structurally simpler plant Potamogeton perfoliatus. In a colonization experiment, we found the highest invertebrate abundance on artificial M. spicatum but found no difference between natural plants. Invertebrate taxon richness displayed no consistent relationship with plant structural complexity. The results imply that plant morphology influences small-scale invertebrate distribution, partly supporting the hypothesis that structurally complex plants harbour higher invertebrate abundance.     

Rates of nitrification,distribution of nitrifying bacteria,and nitrate fluxes in different types of sediment from Danish waters

Nitrification rates, measured in different sediment types from Danish waters, are in the range of 0.3 to 1.4 mmol NO ₃ ^- m^-2 d^-1. There is no signification between sandy and muddy sediments, nor between shallow and deeper stations. The extent of nitrification is probably limited to the zone of oxygen penetration, 1.5 to 5.5 mm. There are, however, nitrifying bacteria located in the anoxic sediment layers. There relative numbers were found by measuring the nitrification potential of the sediment. These potential rates (22°C) can also be used to calculate actual rates of nitrification, by adjusting to in situ temperature and oxygen penetration. These calculated rates agree with the actual measured rates of nitrification for a wide range of sediment types and may be used for the estimation of actual nitrification rates. Nitrate flux out from the sediment/water interface is in the range of 0 to 0.7 mmol NO ₃ ^- m^-2 d^-1. There is no correlation between concentration gradients of nitrate across the sediment/water interface and the measured flux of nitrate. Approximately 50% of nitrate production is released to the water column. The remainder (0 to 0.35 mmol N m^-2 d^-1) may have been denitrified.     

Environmental Services Provided from Riparian Forests in the Nordic Countries

Riparian forests (RF) growing along streams, rivers and lakes comprise more than 2% of the forest area in the Nordic countries (considering a 10 m wide zone from the water body). They have special ecological functions in the landscape. They receive water and nutrients from the upslope areas, are important habitats for biodiversity, have large soil carbon stores, but may emit more greenhouse gases (GHG) than the uplands. In this article, we present a review of the environmental services related to water protection, terrestrial biodiversity, carbon storage and greenhouse gas dynamics provided by RF in the Nordic countries. We discuss the benefits and trade-offs when leaving the RF as a buffer against the impacts from upland forest management, in particular the impacts of clear cutting. Forest buffers are effective in protecting water quality and aquatic life, and have positive effects on terrestrial biodiversity, particularly when broader than 40 m, whereas the effect on the greenhouse gas exchange is unclear.