Degradation characteristics and metabolic pathway of 4-nitrophenol by a halotolerant bacterium Arthrobacter sp. CN2

Arthrobacter sp. strain CN2, capable of degrading 4-nitrophenol, was isolated from activated sludge. Degradation of 4-nitrophenol was optimized at pH 7.7, 30?°C, and 0.53% of glucose. Salt tolerance of 4-nitrophenol degradation was as high as 6% (w/v). Several biodegradation intermediates were identified and quantified by high-performance liquid chromatography and mass spectrometry. 4-Nitrocatechol is involved in the degradation of 4-nitrophenol by CN2. Scale-up of 4-nitrophenol degradation was conducted in a bioreactor with different salinity. When the salinity was below 7%, the degradation rate of 4-nitrophenol was above 90% (100 mg L^?1, 3 L).     

Vertical growth in a coastal city: an analysis of Boa Viagem (Recife,Brazil)

Coastal zones around the world have experienced urban growth in the last 50 years. This landscape change brings new aspects for those zones and the environment. Real estate speculation is a decisive factor that changes landscape, with urban growth that occurs both in the extent and volume of construction. Boa Viagem (BV) beach at Recife, Northeast Brazil was just a sand bar covered by an Atlantic Forest until middle of the 1800s. Today, it has turned into a busy area of the city where residences, services and commerce co-exist in a densely packed arrangement. This work demonstrates and analyses vertical growth in BV and urban changes from 1961 to 2011. It was developed using digital image processing and visual analysis of satellite imagery and aerial photos. A GIS was created using SPRING and ArcScene, to calculate variations in area and volume creating a Volumetric Index (VI). The Minimal Mapping Area was used in sixteen census tract as samples of the area. Occupation and vertical growth were especially accentuated from 1981 to 1996 with the peak at 2011. Increases in vertical growth from shore to inland are evident in all parts of the district. This finding was confirmed by three-dimensional GIS representations of the study area and the VI during the period of this work, showing the potential of 3D GIS models for studying dense urbanization areas in coastal zones.     

Uranium mining in Portugal: a review of the environmental legacies of the largest mines and environmental and human health impacts

The history of uranium mining in Portugal during almost one century has followed international demand peaks of both radium and uranium, which in turn were driven by medical, military, and civil applications. Nowadays, following price drop in the 1980s, mining activities decreased and ceased in 2001. The current challenge is to deal with environmental legacies left by old uranium mines, mainly located in Viseu and Guarda districts. In 2001, based on several radiological surveys carried out, the Portuguese government assumed the remediation costs of abandoned mine areas for environmental safety and public health protection. Detailed environmental and public health risk assessments were performed under the scope of studies both requested by the government and by funded research projects. It was found that the existing risks, due to radiological and chemical exposures to metals and radionuclide’s, were particularly high at the old milling facilities and mines where in situ and heap leaching of low-grade ore occurred. The different studies, involving both humans and non-human species from different trophic levels, demonstrated the existence of effects at different levels of biological organization (molecular, cellular, tissues, individuals, and populations) and on ecosystem services. To mitigate the risks, the environmental rehabilitation works at the Urgeiriça mine complex are almost complete, while at Cunha Baixa mine, they are presently in progress. These works and environmental improvements achieved and expected are described herein.     

Physiological tolerance predicts species composition at different scales in a barnacle guild

This study examined how the species composition of an intertidal barnacle guild varied according to physical gradients in the environment at small scales governed by microclimates, medium scales of wave exposure and large scales of latitude. Barnacle distributions at small and medium scales were sampled in Ireland between 51°29′ and 52°44′N and 6°50′ and 10°08′W. Sampling on European shores spanned ~18° latitude from 37°05′ to 55°16′N. Barnacle surveys mainly took place in 2003–2004. An index of wave fetch was calculated along the wave exposure gradient using a digital coastline-based model that was supported by a biological exposure scale. A ‘dryness’ index was defined according to mean monthly wind speed, fetch along the average wind direction and mean monthly air or sea surface temperatures for 2 years (January 2001–December 2002) which is the period when the most recent adults in the barnacle community would have settled and grown to adulthood. The proportion of the dry-loving barnacle Chthamalus montagui Southward increased within the barnacle guild at all scales as the habitat became warmer and drier. Barnacle densities were high in all habitats, mean densities ranged from a minimum of 4.16 cm⁻² on moderately exposed shores to a maximum of 6.27 cm⁻² in sunlit or south-facing microclimates. Percentage cover of barnacles across the gradient of latitudes was usually >70%. The results suggest that the distribution and abundance of interacting barnacle species on European coasts is strongly controlled by abiotic factors, most likely temperature and desiccation.     

Preliminary toxicity evaluation of water from rice fields using cost‐effective microbiotests

A study was performed in a Protected Area (Natural Reserve of Sado Estuary) in 1996, to evaluate the acute toxicity for aquatic life of surface water from rice fields treated with pesticides, particularly with molinate and quinclorac. As a preliminary assessment, the following rapid toxicity tests were used: “Rotoxkit F”;, “Thamnotoxkit F”; and the recently introduced “Daphtoxkit F magna”; and “Algaltoxkit F”;. Water samples were collected from: a water source for irrigating the rice fields, two rice plots, a drainage channel and from Sado river in which the water is discharged. The results showed that samples from the rice plot treated with molinate were more toxic than those obtained from rice plot treated with quinclorac. Water samples from the river were the most toxic, causing 100% of immobility in all organisms and a substantial inhibition in the algal growth. Water collected from the drainage channel in late July, was also found to be quite toxic. The results obtained until now indicate that some characteristics of these microbiotests, like their rapidity, simplicity and relatively low cost, make them a practical tool to evaluate acute effects of pesticides in freshwater ecosystems. They may also contribute to suggest some changes in pesticides use to promote agricultural practices with lower impact to aquatic life.     

Comparison of four methods to estimate meiobenthic copepod Amonardia normani ingestion rates

Four different methods were used in the control conditions of laboratory to estimate the ingestion rate of a female meiobenthic harpacticoid copepod Amonardia normani: (1) reduction of algal biomass, (2) the quantification of total pigments in fecal pellets, (3) the gut fluorescence method, (4) the percentage of assimilation and the total egestion rate. The food used during all experiments was the diatom Nitzschia constricta in an axenic condition at the concentration of 0.13 μg Chl-a mL^?1 at stationary growth phase. All experiments were made at 20 °C and 30 salinity. All tested methods excepted the quantification of total pigments in fecal pellets resulted in similar estimatives. The gut fluorescence method indicated that during the day gut contents are smaller than during the night but the gut passage time was faster, resulting in similar ingestion rates during the day and the night. The reduction of algal biomass and the percentage of assimilation and the total egestion rate also indicated similar ingestion rates in the day and in the night. The daily ingestion rate represents 107 % of female carbon weight per day (903 ng C cop^?1day^?1).     

Role of climate and competitors in limiting fitness across range edges of an annual plant

It is often assumed that the geographic distributions of species match their climatic tolerances, but this assumption is not frequently tested. Moreover, few studies examine the relative importance of abiotic and biotic factors for limiting species ranges. We combined multiple approaches to assess the extent to which fitness of a widespread native annual legume, Chamaecrista fasciculata, decreases at and beyond its northern and western range edges, and how this is influenced by the presence of neighbors. First, we examined plant fitness and the effect of neighbors in natural populations at different geographic range locations for three years. Fitness decreased toward the northern range edge, but not the western edge. Neighbor removal had a consistently positive effect on seedpod production across all years and sites. Second, we established experimental populations at sites within the range, and at and beyond the northern and western range edges. We tracked individual fitness and recorded seedling recruitment in the following year (a complete generation) to estimate population growth rate. Individual fitness and population growth declined to near zero beyond both range edges, indicating that C. fasciculata with its present genetic composition will not establish in these regions, given conditions currently. We also carried out a neighbor removal treatment. Consistent with the natural populations, neighbors reduced seedpod production of reproductive adults. However, neighbors also increased early-season survival, and this positive effect early in life history resulted in a net positive effect of neighbors on lifetime fitness at most range locations. Our data show that the population growth rate of C. fasciculata includes values above replacement, and populations are well adapted to conditions up to the edge of the range, whereas the severely compromised fitness at sites beyond the edge precludes immediate establishment of populations and thereby impedes adaptation to these conditions.     

DNA damage in oral epithelial cells of individuals chronically exposed to indoor radon (<Superscript>222</Superscript>Rn) in a hydrothermal area

Hydrothermal areas are potentially hazardous to humans as volcanic gases such as radon (²²²Rn) are continuously released from soil diffuse degassing. Exposure to radon is estimated to be the second leading cause of lung cancer, but little is known about radon health-associated risks in hydrothermal regions. This cross-sectional study was designed to evaluate the DNA damage in the buccal epithelial cells of individuals chronically exposed to indoor radon in a volcanic area (Furnas volcano, Azores, Portugal) with a hydrothermal system. Buccal epithelial cells were collected from 33 individuals inhabiting the hydrothermal area (Ribeira Quente village) and from 49 individuals inhabiting a non-hydrothermal area (Ponta Delgada city). Indoor radon was measured with Ramon 2.2 detectors. Chromosome damage was measured by micronucleus cytome assay, and RAPD-PCR was used as a complementary tool to evaluate DNA damage, using three 10-mer primers (D11, F1 and F12). Indoor radon concentration correlated positively with the frequency of micronucleated cells (r _s = 0.325, p = 0.003). Exposure to radon is a risk factor for the occurrence micronucleated cells in the inhabitants of the hydrothermal area (RR = 1.71; 95% CI, 1.2–2.4; p = 0.003). One RAPD-PCR primer (F12) produced differences in the banding pattern, a fact that can indicate its potential for detecting radon-induced specific genomic alterations. The observed association between chronic exposure to indoor radon and the occurrence of chromosome damage in human oral epithelial cells evidences the usefulness of biological surveillance to assess mutations involved in pre-carcinogenesis in hydrothermal areas, reinforcing the need for further studies with human populations living in these areas.     

Study of worker’s exposure to Tantalum-bearing particles in a mining and metallurgical plant

Environmental Geochemistry and Health - The objective of this study was to assess worker exposure to mineral dust particles, and a metabolic model, based on the model adopted by ICRP, was applied...     

Spatial extremes of wildfire sizes: Bayesian hierarchical models for extremes

In Portugal, due to the combination of climatological and ecological factors, large wildfires are a constant threat and due to their economic impact, a big policy issue. In order to organize efficient fire fighting capacity and resource management, correct quantification of the risk of large wildfires are needed. In this paper, we quantify the regional risk of large wildfire sizes, by fitting a Generalized Pareto distribution to excesses over a suitably chosen high threshold. Spatio-temporal variations are introduced into the model through model parameters with suitably chosen link functions. The inference on these models are carried using Bayesian Hierarchical Models and Markov chain Monte Carlo methods.