Obtaining species: sample size considerations

Suppose fish are to be sampled from a stream. A fisheries biologist might ask one of the following three questions: ‘How many fish do I need to catch in order to see all of the species?’, ‘How many fish do I need to catch in order to see all species whose relative frequency is more than 5%?’, or ‘How many fish do I need to catch in order to see a member from each of the species A, B, and C?’. This paper offers a practical solution to such questions by setting a target sample size designed to achieve desired results with known probability. We present three sample size methods, one we call ‘exact’ and the others approximate. Each method is derived under assumed multinomial sampling, and requires (at least approximate) independence of draws and (usually) a large population. The minimum information needed to compute one of the approximate methods is the estimated relative frequency of the rarest species of interest. Total number of species is not needed. Choice of a sample size method depends largely on available computer resources. One approximation (called the ‘Monte Carlo approximation’) gets within ±6 units of exact sample size, but usually requires 20–30 minutes of computer time to compute. The second approximation (called the ‘ratio approximation’) can be computed manually and has relative error under 5% when all species are desired, but can be as much as 50% or more too high when exact sample size is small. Statistically, this problem is an application of the ‘sequential occupancy problem’. Three examples are given which illustrate the calculations so that a reader not interested in technical details can apply our results.     

Effects of Water Management on the Wetlands of the Colorado River Delta, Mexico

The lower delta of the Colorado River has been severely affected by the upstream diversion of water for human use. No river water is officially appropriated to support delta wetlands, yet large marsh areas of conservation interest still exist below the agricultural fields in Mexico. These are supported by flood water, agricultural drainage water, municipal sewage effluent, and seawater in the intertidal zone. From 1973 to 1993 the area of freshwater and brackish marsh varied widely, from 5800 to 63,000 ha. A new opportunity exists to restore wetlands in the delta now that the upstream water impoundments on the Colorado River are filled and flood flows are once again being directed to the delta. But flood control structures now channel most of the flood water directly to the sea, and most of the effluent waters are deposited in evaporation basins rather than used to support wetlands. If the Yuma Desalting Plant in the United States becomes operational and if the Rio Hardy wetlands continue to be drained, the area of brackish wetlands could decrease to less than 2000 ha in the near future. Preserving the remaining wetlands will require a binational water management plan. The plan should maximize the benefits to wetlands of flood and irrigation return flows that enter the delta, and it should minimize flood risks.     

The regulation of pollen foraging by honey bees: how foragers assess the colony's need for pollen

Summary The honey bee colony presents a challenging paradox. Like an organism, it functions as a coherent unit, carefully regulating its internal milieu. But the colony consists of thousands of loosely assembled individuals each functioning rather autonomously. How, then, does the colony acquire the necessary information to organize its work force? And how do individuals acquire information about specific colony needs, and thus know what tasks need be performed? I address these questions through experiments that analyze how honey bees acquire information about the colony's need for pollen and how they regulate its collection. The results demonstrate features of the colony's system for regulating pollen foraging: (1) Pollen foragers quickly acquire new information about the colony's need for pollen. (2) When colony pollen stores are supplemented, many pollen foragers respond by switching to nectar foraging or by remaining in the hive and ceasing to forage at all. (3) Pollen foragers do not need direct contact with pollen to sense the colony's change of state, nor do they use the odor of pollen as a cue to assess the colony's need for pollen. (4) Pollen foragers appear to obtain their information about colony pollen need indirectly from other bees in the hive. (5) The information takes the form of an inhibitory cue. The proposed mechanism for the regulation of pollen foraging involves a hierarchical system of information acquisition and a negative feedback loop. By taking advantage of the vast processing capacity of large numbers of individuals working in parallel, such a system of information acquisition and dissemination may be ideally suited to promote efficient regulation of labor within the colony. Although each individual relies on only limited, local information, the colony as a whole achieves a finely-tuned response to the changing conditions it experiences.     

Behaviour and physiology of sockeye salmon homing through coastal waters to a natal river

Adult sockeye salmon (Oncorhynchus nerka, N = 179) from six Fraser River populations (British Columbia) were intercepted in continental shelf waters ∼215 km from the Fraser River mouth, gastrically implanted with acoustic transmitters, non-lethally biopsied for blood biochemistry, gill Na⁺,K⁺-ATPase activity and somatic energy density and then released. Migration behaviour and travel times to the river mouth and into the river were monitored by underwater telemetry receivers positioned at the river mouth and in the river. Post-release survival of salmon was excellent, with 84% (N = 150) of fish reaching the furthest receiving station ∼85 km upriver. Fish from Late-summer run populations (Adams and Weaver Creek) averaged a migration rate of ∼20 km day⁻¹ through the marine area and held at the river mouth and adjacent areas for 7–9 days before entering the river. Summer-run populations (Birkenhead, Chilko, Horsefly and Stellako) had a migration rate ∼33 km day⁻¹ and held for only 1–3 days. Once in river, similar patterns were observed: Late-run populations migrated at ∼28 km day⁻¹ and Summer-run populations at ∼40 km day⁻¹. From point of release to the river mouth, males migrated faster than females, but once in river migration rates did not differ between sexes. Among all females, a correlation was discovered between levels of circulating testosterone and river entry timing. This correlation was not observed among males. Plasma K⁺, Cl⁻, glucose, lactate and osmolality were also correlated with entry timing in both sexes.     

Mammalian breath: trigger of defensive chemical response in a tenebrionid beetle (Bolitotherus cornutus)

Summary The tenebrionid beetle Bolitotherus cornutus everts a pair of quinone-producing defensive glands in response to mammalian breath. Experiments with a controlled airstream indicate that the beetle recognizes breath on the basis of temperature, humidity, and airflow dynamics. Under attack by mice the beetle everts the glands immediately upon being mouthed and may secure its release as a result. Against ants the beetle is protected by its tough exoskeleton and usually refrains from everting the glands. Other arthropods also show defensive responses when breathed upon.Paper No. 77 of the series Defense Mechanisms of Arthropods     

Desirable design characteristics for long-term monitoring of ecological variables

Long-term environmental monitoring places a set of demands on a sampling strategy not present in a survey designed for a single time period. The inevitability that a sample will become out of date must be a dominant consideration in planning a long-term monitoring programme. The sampling strategy must be able to accommodate periodic frame update and sample restructuring in order to address changes in the composition of the universe and changes in the perception of issues leading to new questions and concerns. The sampling strategy must be capable of adapting to such changes while maintaining its identification as a probability sample and its capacity to detect trends that span the update occasions. These issues are examined with respect to sub-population estimation, post-stratification via conditioning, and sample enlargement and reduction. Design features that involve complex sample structure create potentially serious difficulties, whereas an equal probability design permits greater adaptability and flexibility. Structure should be employed sparingly and in awareness of its undesirable effects.     

Riparian shading and groundwater enhance growth potential for smallmouth bass in Ozark streams.

Moderation of stream temperatures by riparian shading and groundwater are known to promote growth and survival of salmonid fishes, but effects of riparian shade and groundwater on to be growth of warmwater stream fishes are poorly understood or assumed to be negligible. We used stream temperature models to relate shading from riparian vegetation and groundwater inflow to summer water temperatures in Missouri Ozark streams and evaluated effects of summer water temperatures on smallmouth bass, Micropterus dolomieu, growth using a bioenergetics model. Bioenergetics model simulations revealed that adult smallmouth bass in non-spring-fed streams have lower growth potential during summer than fish in spring-fed streams, are subject to mass loss when stream temperatures exceed 27 degrees C, and will likely exhibit greater interannual variation in growth during summer if all growth-influencing factors, other than temperature, are identical between the two stream types. Temperature models indicated that increased riparian shading will expand the longitudinal extent of thermal habitat capable of supporting adult smallmouth bass growth in spring-fed stream reaches when mean daily air temperatures exceed 27 degrees C. Optimum growth temperature (22 degrees C) will be present only in spring-fed streams under these conditions. Potential for increasing shade through riparian restoration is greatest for streams <5 m wide and along north-south reaches of larger streams. However, temperature models also indicated that restoring riparian shading to maximum levels throughout a watershed would increase the total stream mileage capable of supporting positive growth of adult smallmouth bass by only 1-6% when air temperatures are at or near average summer maxima; increases in suitable thermal habitat would be greatest in watersheds with higher spring densities. Riparian management for maintenance or restoration of the thermal habitat of adult smallmouth bass during summer should be focused in areas strongly influenced by groundwater. Restoring riparian shading along spring-fed warmwater streams will likely benefit adult smallmouth bass growth and may ultimately influence population sizes.     

Sex difference in signature whistle production of free-ranging bottlenose dolphins,Tursiops truncates

Signature whistles of 42 free-ranging bottle-nose dophin calves were compared to those of their mothers. Humans judged their similarity by inspection of spectrograms. There was a sex difference in the tendency of calves to produce whistles similar to or different from those of their mothers; most female calves produced whistles that were different from those of their mothers, whereas male calves were more likely to produce whistles that were similar to those of their mothers. Because matrilineally related females associate together and use signature whistles to establish and/or maintain contact with their calves, there may be a selective pressure for females to produce whistles that are distinct from those of their mothers. There may be fewer constraints governing whistle development in males, with the result that some males produce whistles similar to those of their mothers and others do not.     

Bird Use of Restoration and Reference Marshes Within the Barn Island Wildlife Management Area, Stonington, Connecticut, USA

/ Tidal marshes have been actively restored in Connecticut for nearly 20 years, but evaluations of these projects are typically based solely on observations of vegetation change. A formerly impounded valley marsh at the Barn Island Wildlife Management Area is a notable exception; previous research at this site has also included assessments of primary productivity, macroinvertebrates, and use by fishes. To determine the effects of marsh restoration on higher trophic levels, we monitored bird use at five sites within the Barn Island complex, including both restoration and reference marshes. Use by summer bird populations within fixed plots was monitored over two years at all sites. Our principal focus was Impoundment One, a previously impounded valley marsh reopened to full tidal exchange in 1982. This restoration site supported a greater abundance of wetland birds than our other sites, indicating that it is at least equivalent to reference marshes within the same system for this ecological function. Moreover, the species richness of birds and their frequency of occurrence at Impoundment One was greater than at 11 other estuarine marshes in southeastern Connecticut surveyed in a related investigation. A second marsh, under restoration for approximately ten years, appears to be developing in a similar fashion. These results complement previous studies on vegetation, macroinvertebrates, and fish use in this system to show that, over time, the reintroduction of tidal flooding can effectively restore important ecological functions to previously impounded tidal marshes.KEY WORDS: Estuarine; Tidal marsh; Wetland birds; Restoration