Geophysical investigations for evaluation of environmental pollution in a mine tailings area

Sulfide-containing mill wastes of the Komsomolsk ore processing plant situated in the Kemerovo region (Russia) were examined in 2013–2015. Multipurpose studies of the mine tailings determined the composition of waste, pore water, mine drainages, and affected groundwater. Electrical resistivity tomography was used to trace the geoelectric zoning of the waste samples. Layers with low resistivity indicated areas with pore spaces filled with highly mineralized solutions with Fe, Cu, Zn, Cd, As, and Sb at total concentrations of up to 50 g/L. Anomalous zones can be specified as ‘geochemical barriers’ – specific layers where the mobility of the elements is reduced due to pH conditions, redox potential, and Fe(III) hydroxide precipitation. The zones of increased conductivity in oxidized mine tailings indicated local areas with high acid production potential and coexisting acidic pore solution. In non-oxidized tailings, high conductivity of the mineral skeleton was observed. There was a migration of drainage outside the tailings, its direction monitored by geophysical data. Chemical analysis confirmed that the concentrations of As in groundwater samples were higher than the maximum permissible concentration.     

Biomass from phytopathogens and culture conditions improve Penicillium chrysogenum antimicrobial activity and antifungal compounds production

The present study evaluated the effect of culture conditions and phytopathogenic strain co-culture on the production of antimicrobial metabolites and antifungal activity of Penicillium chrysogenum R1, which PCR identified. Antimicrobial activity was determined using the Hunter-Hunter experimental design with three factors (pH, incubation temperature, and inoculum, at two levels each). The antifungal metabolites, β 1-3 glucanase and chitinase, produced in the presence of live and inactivated Fusarium oxysporum Fsox C11 biomass, were evaluated using HPLC-MS and GC-MS. Results showed that P. chrysogenum inhibited the growth of five phytopathogenic fungal strains, and the most significant inhibition was observed for F. oxysporum Fsox C11. The best conditions to achieve the highest antifungal activity of the cell-free extract were pH 7, 28°C, 1 × 10⁶ spores/mL, and 144 h of fermentation, observing 86% inhibition of F. oxysporum Fsox C11 growth. Production of antifungal metabolites such as 1,4-benzoquinone imine, viridicatic acid, phenol-5-methyl-2-(1-methyl ethyl), and hydrolytic enzymes β 1-3 glucanase and chitinase was detected. The results define the perspective in designing new processes and products for biocontrol phytopathogens.     

Seasonal nitrogen fluxes of the Lena River Delta

The Arctic is nutrient limited, particularly by nitrogen, and is impacted by anthropogenic global warming which occurs approximately twice as fast compared to the global average. Arctic warming intensifies thawing of permafrost-affected soils releasing their large organic nitrogen reservoir. This organic nitrogen reaches hydrological systems, is remineralized to reactive inorganic nitrogen, and is transported to the Arctic Ocean via large rivers. We estimate the load of nitrogen supplied from terrestrial sources into the Arctic Ocean by sampling in the Lena River and its Delta. We took water samples along one of the major deltaic channels in winter and summer in 2019 and sampling station in the central delta over a one-year cycle. Additionally, we investigate the potential release of reactive nitrogen, including nitrous oxide from soils in the Delta. We found that the Lena transported nitrogen as dissolved organic nitrogen to the coastal Arctic Ocean and that eroded soils are sources of reactive inorganic nitrogen such as ammonium and nitrate. The Lena and the Deltaic region apparently are considerable sources of nitrogen to nearshore coastal zone. The potential higher availability of inorganic nitrogen might be a source to enhance nitrous oxide emissions from terrestrial and aquatic sources to the atmosphere.Supplementary InformationThe online version contains supplementary material available at 10.1007/s13280-021-01665-0.     

Biodegradation potential of the genus Rhodococcus

A large number of aromatic compounds and organic nitriles, the two groups of compounds covered in this review, are intermediates, products, by-products or waste products of the chemical and pharmaceutical industries, agriculture and the processing of fossil fuels. The majority of these synthetic substances (xenobiotics) are toxic and their release and accumulation in the environment pose a serious threat to living organisms. Bioremediation using various bacterial strains of the genus Rhodococcus has proved to be a promising option for the clean-up of polluted sites. The large genomes of rhodococci, their redundant and versatile catabolic pathways, their ability to uptake and metabolize hydrophobic compounds, to form biofilms, to persist in adverse conditions and the availability of recently developed tools for genetic engineering in rhodococci make them suitable industrial microorganisms for biotransformations and the biodegradation of many organic compounds. The peripheral and central catabolic pathways in rhodococci are characterized for each type of aromatics (hydrocarbons, phenols, halogenated, nitroaromatic, and heterocyclic compounds) in this review. Pathways involved in the hydrolysis of nitrile pollutants (aliphatic nitriles, benzonitrile analogues) and the corresponding enzymes (nitrilase, nitrile hydratase) are described in detail. Examples of regulatory mechanisms for the expression of the catabolic genes are given. The strains that efficiently degrade the compounds in question are highlighted and examples of their use in biodegradation processes are presented.     

Novel approach to monitoring of the soil biological quality

In this study, a new approach to interpretation of results of the simple microbial biomass and respiration measurements in the soil microbiology is proposed. The principle is based on eight basal and derived microbial parameters, which are standardized and then plotted into sunray plots. The output is visual presentation of one plot for each soil, which makes possible the relative comparison and evaluation of soils in the monitored set. Problems of soil microbiology, such as the lack of benchmarking and reference values, can be avoided by using the proposed method. We found that eight parameters provide enough information for evaluation of the status of the soil microorganisms and, thus, for evaluation of the soil biological quality. The usage of rare parameters (potential respiration PR, ratio of potential and basal respiration PR/BR, biomass-specific potential respiration PR/C(bio), available organic carbon C(ext), and biomass-specific available organic carbon C(ext)/C(bio)) can be recommended, besides classical and well-known parameters (microbial biomass C(bio), basal respiration BR, metabolic coefficient qCO(2)). The combination of basal parameters and derived coefficients can also extend our knowledge about the condition of the soil microorganisms. In monitoring the case studies presented, we observed that soils evaluated to possess good biological quality displayed generally higher values of organic carbon, total nitrogen, clay, and cation exchange capacity. The soils of good biological quality can display higher levels of contaminants. This is probably related with the higher content of organic carbon and clay in these soils.     

Trapping efficiencies of cultivated and natural riparian vegetation of northern Laos

In northern Laos, intensification of cultivation on sloping land leads to accelerated erosion processes. Management of riparian land may counteract the negative impacts of higher sediment delivery rates on water quality. This study assessed water and sediment concentration trapping efficiencies of riparian vegetation in northern Laos and the effect of cultivation of riparian land on water quality. Runoff flowing in and out of selected riparian sites was monitored by means of open troughs. In 2005, two native grass, two bamboo, and two banana sites were monitored. In 2006, adjacent to steep banana, bamboo, and native grass sites, three upland rice sites were established and monitored. Water trapping efficiency (WTE) and sediment concentration trapping efficiency (SCTE) were calculated on an event basis; means and 95% confidence intervals (CIs) were estimated with a bootstrapping approach. Confidence intervals were large and overlapping among sites. Seepage conditions severely limited trapping efficiency. Native grass resulted in the highest WTE (95% CI, -0.10 to 0.23), which was not significantly different from zero. Banana resulted in the highest SCTE (95% CI, 0.06-0.40). Bamboo had negative WTE and SCTE. Median outflow runoff from rice sites was nine times the inflow. Median outflow sediment concentration from rice sites was two to five times that of their adjacent sites and two to five times the inflow sediment concentration. Although low-tillage banana plantation may reduce sediment concentration of runoff, cultivation of annual crops in riparian land leads to delivery of turbid runoff into the stream, thus severely affecting stream water quality.     

Chloride concentration affects soil microbial community

We studied the effect of increased inorganic chloride concentration on forest soil microflora in a laboratory experiment. Microbial DNA extracted from experimental soil samples was amplified with PCR using primer pairs specifically amplifying bacterial, eukaryotic and fungal DNA fragments. The resulting amplified DNA was further used for terminal restriction fragment length polymorphism (TRFLP) analysis. Our work revealed that chloride concentration affects the indigenous microbial community in experimental soil. This was documented on an unidentified microorganism whose DNA was detectable in soil high in chloride but was not found in soil with low chloride concentration. The presence of the organism responsive to increased chloride concentration was associated with the highest observed value of chlorination of humic acid, suggesting possible role of this organism in soil chlorine turnover. High chloride concentration in the soil tended to decrease the rate of degradation of trichloroacetic acid. The problems connected with measurement of chlorination rates in soil are discussed.     

Synthesis of zirconia-immobilized copper chelates for catalytic decomposition of hydrogen peroxide and the oxidation of polycyclic aromatic hydrocarbons

Chelating sorbents with diethylenetriaminepenta(methylene-phosphonic acid) (DTPMPA) and ethylenediaminetetraacetic acid ligands immobilized on zirconia matrix were prepared and subsequently saturated with Cu(II). All the Cu chelates catalyzed decomposition of H(2)O(2) yielding highly reactive hydroxyl radicals. All of them were also able to catalyze degradation of polycyclic aromatic hydrocarbons (anthracene, benzo[a]pyrene and benzo[b]fluoranthene). The most effective DTPMPA-based catalysts G-32 and G-35 (10 mg ml(-1) with 100 mmol H(2)O(2)) caused almost complete decomposition of 15 ppm anthracene and benzo[a]pyrene during a five day catalytic cycle at 30 degrees C. Anthracene-1,4-dione was the main product of anthracene oxidation by all catalysts. The catalysts were active in several cycles without regeneration.     

Rhizosphere localized cationic peroxidase from barley roots is strongly activated by cadmium and correlated with root growth inhibition

The activity of Cd-induced POD isozyme isolated from the surface of intact barley roots growing under some abiotic stress conditions (toxic metals: Al, Co, Cu, Hg; drought, NaCl, extreme temperatures: heat, cold) and compounds activating (2,4-D) or inhibiting (SHAM) POD activity as well as H(2)O(2) and H(2)O(2) scavenger (DTT) was characterized. Strong Cd concentration-dependent accumulation of one cationic POD isozyme was observed on PAGE, which correlated with Cd- and other stress induced root growth inhibition. This isoPOD is basic with isoelectric point about 9 and its localization is restricted only to the apical part of the barley root tip.     

A new twist on an old regression: transfer of chemicals to beef and milk in human and ecological risk assessment

Exposure of humans to chemicals in beef or milk is part of almost all risk evaluation procedures carried out to reduce emissions or to remediate sites. Concentrations of substances in these livestock products are often estimated using log-log regressions that relate the biotransfer factor BTF to the octanol-water partition ratio K(ow). However, the correctness of these empirical correlations has been questioned. Here, we compare them to the mechanistic model OMEGA that describes the distribution of substances in organisms by integrating theory on chemical fugacity and biological allometry. OMEGA has been calibrated and validated on thousands of laboratory and field data, reflecting many chemical substances and biological species. Overall fluxes of water, food, tissue (growth), milk and stable substances calculated by OMEGA are within a factor of two from independent data obtained in experiments. Rate constants measured for elimination of individual compounds of a recalcitrant nature vary around the level expected from the model for output to faeces and milk. Both data and model suggest that biotransfer BTF of stable substances to beef and milk is independent of the octanol-water partition ratio K(ow) in the range of 10(3)-10(6). This contradicts empirical regressions including stable and labile compounds. As expected, levels of labile substances vary widely around a tentative indication derived from the model. Transformation and accumulation of labile substances remains highly specific for the chemical and organism concerned but depends weakly on the octanol-water partition ratio K(ow). Several possibilities for additional refinement are identified.