A copula-based inference to piecewise exponential models under dependent censoring,with application to time to metamorphosis of salamander larvae

In ecology and evolutionary biology, controlled animal experiments are often conducted to measure time to metamorphosis which is possibly censored by the competing risk of death and the follow-up end. This paper considers the problem of estimating the survival function of time-to-event when it is subject to dependent censoring. When the censorship is due to competing risks, the traditional assumption of independent censorship may not be satisfied, and hence, the usual application of the Kaplan–Meier estimator yields a biased estimation for the survival function of the event time. This paper follows an assumed copula approach (Zheng and Klein in Biometrika 82(1):127–138, 1995) to adjust for dependence between the event time of interest and the competing event time. While the literature on an assumed copula approach has mostly focused on semiparametric settings, we alternatively consider a parametric approach with piecewise exponential models for fitting the survival function. We develop maximum likelihood estimation under the piecewise exponential models with an assumed copula. A goodness-of-fit procedure is also developed, which touches upon the identifiability issue of the copula. We conduct simulations to examine the performance of the proposed method and compare it with an existing semiparametric method. The method is applied to real data analysis on time to metamorphosis for salamander larvae living in Hokkaido, Japan (Michimae et al. in Evol Ecol Res 16:617–629, 2014).     

Hydrothermal treatment of MSWI bottom ash forming acid-resistant material

To recycle municipal solid waste incinerator (MSWI) bottom ash, synthesis of hydrothermal minerals from bottom ash was performed to stabilize heavy metals. MSWI bottom ash was mixed with SiO(2), Al(OH)(3), and Mg(OH)(2) so its chemical composition was similar to that of hydrothermal clay minerals. These solid specimens were mixed with water at a liquid/solid ratio of 5. The reaction temperature was 200 degrees C, and reactions were performed for 24-240h. Generation of kaolinite/smectite mixed-layer clay mineral was found in the samples after the reaction of the mixture of bottom ash, SiO(2), and Mg(OH)(2). Calcium silicate hydrate minerals such as tobermorite and xonotlite were also generated. X-ray powder diffraction suggested the presence of amorphous materials. Leaching tests at various pHs revealed that the concentration of heavy metals in the leachates from MSWI bottom ash hydrothermally treated with SiO(2) and Mg(OH)(2) was lower than that in leachates from non-treated bottom ash, especially under acid conditions. Hydrothermal treatment with modification of chemical composition may have potential for the recycling of MSWI bottom ash.     

Municipal solid waste management and short-term projection of the waste discard levels in Taiwan

Industrialization and urbanization result in significant changes in lifestyle. These lifestyle changes seem to lead to unsustainable consumption patterns and increase the generation of various kinds of environmental loads, especially the amount of municipal solid waste (MSW). Taiwan is a small island with scarce natural resources. The economic development in Taiwan has resulted in the generation of large amounts of MSW. As a result, the Taiwan Environmental Pollution Administration (TEPA) has produced regulations for waste minimization and has imposed several important policy measures that have successfully reduced the MSW discard rate in recent years and have established a public recycling network as a part of the MSW collection. Nowadays, the objective of the MSW policies in Taiwan is to develop a “zero-waste society.” This article aims to review the MSW management progress in Taiwan and to project future MSW discards up to 2011 based on the national plan and assumed scenarios for socioeconomic variables. According to the analysis results, a more sustainable consumption pattern can be proposed and the corresponding MSW management system can be planned so as to develop a low-waste-discard society.     

A novel extractant for removal of hazardous metals from preservative-treated wood waste

The purpose of this study was to develop a one-step metal extraction process that would effectively remove hazardous elements from wood powder or chips of western hemlock [Tsuga heterophylla (Raf.) Sarg.] treated with chromated copper arsenate (CCA) preservative. In addition, we tested this method for wood treated with other copper-based preservatives such as ammoniacal copper quaternary (ACQ) and copper, boron, and azole (CuAz). A bioxalate solution consisting of 0.125 M oxalic acid adjusted to pH 3.2 with sodium hydroxide was tested for its ability to extract chromium, copper, and arsenic from wood treated with CCA and copper from ACQ, CuAz, or a mixture of CCA-, ACQ-, and CuAz-treated wood in single step. The extraction proceeded efficiently with 6 h of treatment, and was insensitive to the differences in chemical characteristics, including solubility of individual elements. After 6 h of treatment, approximately 90% of chromium, copper, and arsenic were effectively removed from wood treated with CCA or a mixture of CCA, ACQ, and CuAz and 90% of copper from ACQ- and CuAz-treated wood. These results demonstrate that the solvent extraction technique using pH-adjusted bioxalate solution with sodium hydroxide is a promising method for pollution minimization by various types of wastes contaminated with heavy metals and arsenic.     

Environmental risk assessment and concentration trend of atmospheric volatile organic compounds in Hyogo Prefecture, Japan

Purpose  

The purpose of this study was to evaluate the influences of volatile organic compounds (VOCs) emissions on hazardousness and photochemical reactivity and to propose efficient VOCs abatement strategies.     

Trends in the enantiomeric composition of polychlorinated biphenyl atropisomers in human breast milk

For the precise estimation of the risk to human health caused by persistent organic pollutants (POPs), it is important to discuss enantiomer fraction value (EF value) because it is reported that behaviors such as stability and toxicity of enantiomers are quite different in human body. Among POPs, polychlorinated biphenyl (PCB) is known as one of the most persistent compounds in human breast milk samples. The main exposure source of PCB for human body is mostly from food especially in seafood. The contamination of fish and shellfish has been a serious problem for the Japanese, who consume a large amount of fish in their diet. PCBs have 19 congeners which are chlorine-substituted in 3- or 4- ortho positions are known to have enantiomers. In this study, we analyzed PCB 183 (2,2′,3,4,4′,5′,6-hepta CB) in human breast milk and fish samples enantioselectively and revealed the time trends of the EF value. Though EF value of PCB 183 in fish samples sustained close to racemate (EF?=?0.5) from 1982 to 2012, that in breast milk increased over time. This fact indicates that (+)-PCB-183 has greater bioaccumulation potential than (-)-PCB-183 in human body; therefore, the toxicity of (+)-PCB-183 should be emphasized.     

Polychlorinated biphenyl (118) activates osteoclasts and induces bone resorption in goldfish

To analyze the effect of polychlorinated biphenyl (PCB) 118 on fish bone metabolism, we examined osteoclastic and osteoblastic activities, as well as plasma calcium levels, in the scales of PCB (118)-injected goldfish. In addition, effect of PCB (118) on osteoclasts and osteoblasts was investigated in vitro. Immature goldfish, in which the endogenous effects of sex steroids are negligible, were used. PCB (118) was solubilized in dimethyl sulfoxide at a concentration of 10 ppm. At 1 and 2 days after PCB (118) injection (100 ng/g body weight), both osteoclastic and osteoblastic activities, and plasma calcium levels were measured. In an in vitro study, then, both osteoclastic and osteoblastic activities as well as each marker mRNA expression were examined. At 2 days, scale osteoclastic activity in PCB (118)-injected goldfish increased significantly, while osteoblastic activity did not change significantly. Corresponding to osteoclastic activity, plasma calcium levels increased significantly at 2 days after PCB (118) administration. Osteoclastic activation also occurred in the marker enzyme activities and mRNA expressions in vitro. Thus, we conclude that PCB (118) disrupts bone metabolism in goldfish both in vivo and in vitro experiments.     

Studies on automated survey system of environmental chemicals by gas chromatography-mass spectrometry-computer I. Retrieval system of mass spectra

A retrieval system of mass spectra based upon the Probability Based Matching method was studied in order to apply it to survey the chemicals in environments by a gas chromatography-mass spectrometry-computer system. As retrieval indices, peak missing probability and relative confidence value were proposed.     

Short-time exposure to mono-n-butyl phthalate (MBP)-induced oxidative stress associated with DNA damage and the atrophy of the testis in pubertal rats

Phthalates are widely used as plasticizer in various consumer domestic products and are known to disturb the male reproductive function in rodents. This study investigated the involvement of oxidative stress and the atrophy of the testes in pubertal rats exposed to mono-n-butyl phthalate (MBP). Four-week-old pubertal male rats were separated into three groups. In group I, 21 rats were fed rat chow containing 2 % MBP for 3 days. In group II, 21 rats were fed rat chow containing 2 % MBP for 3 days and antioxidant vitamins C (250 mg/kg/day) and E (50 mg/kg/day) were injected daily. In group III, 21 rats were fed standard rat chow and used as controls. After 3 days, each testis was weighed and the germ cell development was evaluated using the Johnsen score. The urinary 8-hydroxy-2′-deoxyguanosine (8-OHdG) levels were measured as a biological marker of oxidative DNA damage. The mean testis weight was significantly lower for group I than groups II or III (p?<?0.05). The mean Johnsen score was significantly lower for group I than for groups II or III (p?<?0.05). Urinary 8-OHdG concentrations were higher in group I than in groups II or III. Short-time exposure to MBP may therefore induce oxidative DNA damage in rat testes, while antioxidant vitamins administered during exposure may protect against this stress.     

Comparative study on indoor air quality in Japan and China: Characteristics of residential indoor and outdoor VOCs

We conducted a comparative study on the indoor air quality for Japan and China to investigate aromatic volatile organic compounds (VOCs) in indoor microenvironments (living room, bedroom, and kitchen) and outdoors in summer and winter during 2006–2007. Samples were taken from Shizuoka in Japan and Hangzhou in China, which are urban cities with similar latitudes. Throughout the samplings, the indoor and outdoor concentrations of many of the targeted VOCs (benzene, toluene, ethylbenzene, xylenes, and trimethylbenzenes) in China were significantly higher than those in Japan. The indoor concentrations of VOCs in Japan were somewhat consistent with those outdoors, whereas those in China tended to be higher than those outdoors. Here, we investigated the differences in VOC concentrations between Japan and China. Compositional analysis of indoor and outdoor VOCs showed bilateral differences; the contribution of benzene in China was remarkably higher than that in Japan. Significant correlations (p < 0.05) for benzene were observed among the concentrations in indoor microenvironments and between the outdoors and living rooms or kitchens in Japan. In China, however, significant correlations were observed only between living rooms and bedrooms. These findings suggest differences in strengths of indoor VOC emissions between Japan and China. The source characterizations were also investigated using principal component analysis/absolute principal component scores. It was found that outdoor sources including vehicle emission and industrial sources, and human activity could be significant sources of indoor VOC pollution in Japan and China respectively. In addition, the lifetime cancer risks estimated from unit risks and geometric mean indoor concentrations of carcinogenic VOCs were 2.3 × 10^?5 in Japan and 21 × 10^?5 in China, indicating that the exposure risks in China were approximately 10 times higher than those in Japan.