Hydrodynamics and contaminant transport on a degraded bed at a 90-degree channel confluence

Channel confluences at which two channels merge have an important effect on momentum exchange and contaminant diffusion in both natural rivers and artificial canals. In this study, a three-dimensional numerical model, which is based on the Reynolds Averaged Navier–Stokes equations and Reynolds Stress Turbulence model, is applied to simulate and compare flow patterns and contaminant transport processes for different bed morphologies. The results clearly show that the distribution of contaminant concentrations is mainly controlled by the shear layer and two counter-rotating helical cells, which in turn are affected by the discharge ratio and the bed morphology. As the discharge ratio increases, the shear flow moves to the outer bank and the counter-clockwise tributary helical cell caused by flow deflection is enlarged, leading the mixing happens near the outer bank and the mixing layer distorted. The bed morphology can induce shrinkage of the separation zone and increase of the clockwise main channel helical cell, which is initiated by the interaction between the tributary helical cell and the main channel flow and strengthened by the deep scour hole. The bed morphology can also affect the distortion direction of the mixing layer. Both a large discharge ratio and the bed morphology could lead to an increase in mixing intensity.     

Bayesian nonparametric inference for the overlap of daily animal activity patterns

The study of the interaction among species is an active area of research in Ecology. In particular, it is of interest to evaluate the overlap of their ecological niches. Temporal activity is one of the niche’s axes most commonly used to explore ecological segregation among animal species, and many contributions focus on the overlap of this variable. Once the information of the temporal activity is obtained in the wild, the data is treated as a random sample. There exist different methods to estimate the overlap. Specifically, in the case of two species, one possibility is to estimate the density of the temporal activity of each species and then evaluate the overlap between these density functions. This leads naturally to the analysis of circular data. Most of the procedures currently in use impose some rather restrictive assumptions on the probabilistic models used to describe the phenomena, and only provide approximate measures of the uncertainty involved in the process. In this article, we propose a Bayesian nonparametric approach which incorporates a well-defined noninformative prior. We take advantage of the data structure to define such a prior in terms of the predictive distribution. To the best of our knowledge, this is a novel approach. Our procedure is compared with a well-known method using simulated data, and applied to the analysis of real camera-trap data concerning two mammalian species from the El Triunfo biosphere reserve (Chiapas, Mexico).     

Citizen participation in disaster recovery projects and programmes in rural communities: a comparison of the Haiti earthquake and Hurricane Katrina

This study investigates predictors of local participation in recovery projects and programmes following Hurricane Katrina in the United States in 2005 and the earthquake in Haiti in 2010. Using two sets of survey data, it examines whether disaster impacts and social capital (social trust and civic engagement) are associated with disaster recovery participation and compares predictors of such engagement in the two locations. Multivariate logistic regression results reveal that physical injuries, limited community mobility, and government trust increase recovery participation in Haiti (n=278), whereas emotional distress and homeownership decrease it. On the Gulf Coast of the US (n=259), physical injuries and higher civic engagement augment recovery participation, while homeownership and age reduce it. The confounding factors of national contexts and post‐disaster time frames might explain the differences in the results. The discussion addresses the relation between country‐specific vulnerability and recovery participation and suggests implications for policy and practice to improve local citizens’ capabilities to participate in sustainable recovery processes.     

Should all disaster risks be reduced? A perspective from the systems concept of the edge of chaos

The field of disaster risk reduction (DRR) has risen to prominence since the declaration of the International Decade of Disaster Risk Reduction between 1990 and 2000. This decade provided the impetus for a change from the predominant paradigm of disaster response to that of disaster risk reduction as a means of addressing the underlying drivers that lead to disasters. In an effort to promote risk reduction, the UNISDR (the principal agency for disaster risk reduction within the UN structure) formulated policies and strategies to provide both conceptual and practical guidance as to how risk should be reduced. However noble the efforts, this paper contends that the current approach to and understanding of risk within the international community might not be cognisant of complex adaptive systems (CAS) concepts such as the edge of chaos. Specifically, this concept argues that risk (or chaos) within a system is actually a fundamental requirement to the functioning of all resilient socio-ecological systems. Therefore, the reduction of risk without an understanding of the role of that risk within the larger socio-ecological system might actually end up reducing the system’s overall level of disaster resilience. This paper aims to explore the concept of edge of chaos through a literature review of key theoretical works on the topic, followed by a discussion on its implications for the predominant paradigm of risk reduction within disaster risk management policy and practice.     

Shell shape variation in populations of Mytilus chilensis (Hupe 1854) from southern Chile: a geometric morphometric approach

The pattern of shell shape variation in populations of the mussel, Mytilus chilensis (Hupe 1854) from Southern Chile was analyzed as a function of sample origin (cultivated vs. wild) and latitude, using standard tools of geometric morphometrics for landmark data. Additionally, posterior adductor muscle index (PAMI), Freeman condition index and shell thickness were measured in each sample. Highly significant differences in shell shape components were found among mussel populations. These differences are related to the origin of samples (expansion of the posterior adductor muscle scar, elongation of the lateral ligament and of the ventral umbo position in non-cultivated samples) and to latitude (more elongated shells and more extended posterior adductor muscle scar in most southern samples when compared with the northernmost ones). PAMI and shell thickness were statistically higher in wild population, and Freeman condition index was higher in cultivated shells. It is suggested that in wild populations of M. chilensis, the mussels may face higher predator pressures and other environmental stress factors. Consequently, individuals may be using higher energy fraction to reinforce shells and to promote adductor muscle growth at the expense of somatic growth. In contrast, individuals found in calm aquaculture environments are relatively protected from predators and use most of their assimilated energy in somatic growth. In turn, this growth depends on changes that covariate with shell morphology.     

Alimentary niche partitioning in the Galapagos sea lion, Zalophus wollebaeki

Sea lions are generally considered opportunistic feeders. However, studies from different areas suggest their diet consists mostly of four to five types of prey. Previous studies in Galapagos sea lions have identified at least three feeding strategies for this species, suggesting diversification of their diet. Diet diversification is favored in organisms with relatively high trophic position and subject to high intra-specific and low inter-specific competition. Zalophus wollebaeki meet these criteria as the only pinniped on San Cristobal Island, where three sea lion rookeries are located within 11 km: a distance considerably shorter than their 41 km foraging range. To measure the degree of diet diversification, we used scats and stable isotope analyses. A total of 270 scat samples from lactating females and 142 fur samples from sea lion pups were collected during the breeding season 2006. The scat analysis identified distinct diets among rookeries, with minimal trophic overlap (Cλ = 0.19), a trophic level TL = 4.5 (secondary–tertiary carnivore), and trophic breadth of a specialist predator (B _i  = 0.37). The mean δ¹⁵N and δ¹³C values were 13.07 ± 0.52 and −16.34 ± 0.37, respectively. No significant difference was found in the δ¹⁵N values from the sea lion rookeries, but differences were found inter- and intra-population in δ¹³C values for pups from different groups (ANOVA P < 0.05). Our results indicate that diet diversification is present in the Galapagos sea lion and may play important role to the survival of the species in a habitat where pinniped populations are limited.     

Different proxies for the reactivity of aquatic sediments towards oxygen: A model assessment

Information on benthic carbon mineralization rates is often derived from the analysis of oxygen microprofiles in sediments. To enable a direct comparison of different sediment environments, it is often desirable to characterize sediments by a single proxy that expresses their “reactivity” towards oxygen. For this, there are three commonly used proxies: the oxygen penetration depth (OPD), the oxygen flux at the sediment-water interface (DOU), and the maximum volumetric oxygen consumption rate (R_max). The OPD can be directly determined from the oxygen depth profile, while the DOU is usually obtained by a linear fit to the oxygen gradient either in diffusive boundary layer. The oxygen consumption rate R_max requires the fitting of a reactive-transport model to the data profile. This article shows that the OPD alone is a suboptimal proxy, because it shows a strong dependence on the half-saturation constant K_s, and secondly, because it is sensitive to the particular re-oxidation conditions right above the oxic-anoxic interface. Similarly, the volumetric oxygen consumption rate R_max is rather strongly dependent on the kinetic model formulation employed. To show this we fitted three different (Bouldin, Blackman and Monod) kinetics to the same oxygen data profiles. When fitting these models, the R_max values obtained differed by 20% for exactly the same oxygen profile. Accordingly, if one reports R_max values, it is crucial to specify the kinetic model alongside. Overall, DOU emerges as sediment reactivity proxy which is the least model dependent.     

Habituation to low-risk predators improves body condition in lizards

Habituation to nonlethal predation stimuli may provide benefits for animals living in areas with frequent encounters with low-risk predators. On the other hand, individuals can be very consistent in their antipredator responses, with shy individuals showing greater degree of responsiveness than bold individuals. However, the link between habituation or boldness and individual benefits has not been thoroughly investigated. We established whether and how two behavioral components associated with antipredator responses (habituation and boldness, and their interaction) would influence body condition, which is a parameter related to fitness. We conducted an outdoor semi-natural experiment with Iberian wall lizards (Podarcis hispanica). Individual boldness was consistent across contexts, but we did not find any effect of boldness or the interaction between boldness and habituation on body condition. However, those individuals that habituated more readily to a frequent predatory stimulus were able to increase their body condition more relative to lizards that habituated less. This finding highlights the importance of individual differences in behavioral plasticity, which could influence traits related to fitness. Habituation can provide benefits for individuals exposed to low-risk predators; however, individuals more prone to habituation could also experience mortality costs by wrongly habituating to a dangerous predator.     

Genital shape correlates with sperm transfer success in the praying mantis Ciulfina klassi (Insecta: Mantodea)

The rapid divergence of male genitalia is a widely observed evolutionary phenomenon. Although sexual selection is currently regarded as providing the most likely driving force behind genital diversification, the mechanisms responsible are still debated. Here, we investigate the relationship between male genital morphology and sperm transfer in the praying mantid Ciulfina klassi using geometric morphometrics. The shape of male genitalia in C. klassi influenced sperm transfer duration and the number and proportion of sperm transferred, suggesting that genital morphology is under sexual selection in this species. Genital size however was not correlated with any aspect of sperm transfer. Intriguingly, two of the major genital shape components correlated positively with the number of sperm transferred, but negatively with sperm transfer duration. Hence, males that most effectively transfer sperm to the female spermatheca do so in a relatively short period of time. A direct negative relationship was also found between sperm transfer duration and sperm transfer success. Overall, our study suggests that the variable genital shape of Ciulfina may have been selected for more efficient sperm transfer.