Response of “Alamo” switchgrass tissue chemistry and biomass to nitrogen fertilization in West Tennessee,USA

Switchgrass (Panicum virgatum) is a perennial, warm-season grass that has been identified as a potential biofuel feedstock over a large part of North America. We examined above- and belowground responses to nitrogen fertilization in “Alamo” switchgrass grown in West Tennessee, USA. The fertilizer study included a spring and fall sampling of 5-year old switchgrass grown under annual applications of 0, 67, and 202 kg N ha^?1 (as ammonium nitrate). Fertilization changed switchgrass biomass allocation as indicated by root:shoot ratios. End-of-growing season root:shoot ratios (mean ± SE) declined significantly (P ≤ 0.05) at the highest fertilizer nitrogen treatment (2.16 ± 0.08, 2.02 ± 0.18, and 0.88 ± 0.14, respectively, at 0, 67, and 202 kg N ha^?1). Fertilization also significantly increased above- and belowground nitrogen concentrations and decreased plant C:N ratios. Data are presented for coarse live roots, fine live roots, coarse dead roots, fine dead roots, and rhizomes. At the end of the growing season, there was more carbon and nitrogen stored in belowground biomass than aboveground biomass. Fertilization impacted switchgrass tissue chemistry and biomass allocation in ways that potentially impact soil carbon cycle processes and soil carbon storage.     

Evaluating unintended consequences of intentional species introductions and eradications for improved conservation management

Increasingly intensive strategies to maintain biodiversity and ecosystem function are being deployed in response to global anthropogenic threats, including intentionally introducing and eradicating species via assisted migration, rewilding, biological control, invasive species eradications, and gene drives. These actions are highly contentious because of their potential for unintended consequences. We conducted a global literature review of these conservation actions to quantify how often unintended outcomes occur and to elucidate their underlying causes. To evaluate conservation outcomes, we developed a community assessment framework for systematically mapping the range of possible interaction types for 111 case studies. Applying this tool, we quantified the number of interaction types considered in each study and documented the nature and strength of intended and unintended outcomes. Intended outcomes were reported in 51% of cases, a combination of intended outcomes and unintended outcomes in 26%, and strictly unintended outcomes in 10%. Hence, unintended outcomes were reported in 36% of all cases evaluated. In evaluating overall conservations outcomes (weighing intended vs. unintended effects), some unintended effects were fairly innocuous relative to the conservation objective, whereas others resulted in serious unintended consequences in recipient communities. Studies that assessed a greater number of community interactions with the target species reported unintended outcomes more often, suggesting that unintended consequences may be underreported due to insufficient vetting. Most reported unintended outcomes arose from direct effects (68%) or simple density-mediated or indirect effects (25%) linked to the target species. Only a few documented cases arose from more complex interaction pathways (7%). Therefore, most unintended outcomes involved simple interactions that could be predicted and mitigated through more formal vetting. Our community assessment framework provides a tool for screening future conservation actions by mapping the recipient community interaction web to identify and mitigate unintended outcomes from intentional species introductions and eradications for conservation.     

Genomic erosion in a demographically recovered bird species during conservation rescue

The pink pigeon (Nesoenas mayeri) is an endemic species of Mauritius that has made a remarkable recovery after a severe population bottleneck in the 1970s to early 1990s. Prior to this bottleneck, an ex situ population was established from which captive-bred individuals were released into free-living subpopulations to increase population size and genetic variation. This conservation rescue led to rapid population recovery to 400–480 individuals, and the species was twice downlisted on the International Union for the Conservation of Nature (IUCN) Red List. We analyzed the impacts of the bottleneck and genetic rescue on neutral genetic variation during and after population recovery (1993–2008) with restriction site-associated sequencing, microsatellite analyses, and quantitative genetic analysis of studbook data of 1112 birds from zoos in Europe and the United States. We used computer simulations to study the predicted changes in genetic variation and population viability from the past into the future. Genetic variation declined rapidly, despite the population rebound, and the effective population size was approximately an order of magnitude smaller than census size. The species carried a high genetic load of circa 15 lethal equivalents for longevity. Our computer simulations predicted continued inbreeding will likely result in increased expression of deleterious mutations (i.e., a high realized load) and severe inbreeding depression. Without continued conservation actions, it is likely that the pink pigeon will go extinct in the wild within 100 years. Conservation rescue of the pink pigeon has been instrumental in the recovery of the free-living population. However, further genetic rescue with captive-bred birds from zoos is required to recover lost variation, reduce expression of harmful deleterious variation, and prevent extinction. The use of genomics and modeling data can inform IUCN assessments of the viability and extinction risk of species, and it helps in assessments of the conservation dependency of populations.     

Genetic comparison of two populations of the deep-sea vent shrimp Rimicaris exoculata (Decapoda: Bresiliidae) from the Mid-Atlantic Ridge

Allozyme data are presented for populations of the bresiliid shrimp Rimicaris exoculata from two hydrothermal vent fields, Trans-Atlantic Geotraverse (TAG) and Broken Spur, located along the Mid-Atlantic Ridge. These indicate that all morphotypes of R. exoculata examined, including those previously interpreted as representing separate species, are conspecific. Conversely, genetic identity between a single specimen of Chorocaris sp. and R. exoculata was high for intergeneric comparisons. Genetic variation in the populations of R. exoculata (H _o =0.034 to 0.056) was in the lower range of that estimated for other vent organisms, but similar to values obtained for other species of caridean shrimps in previous genetic studies. F-statistics were used to examine the population structure of R. exoculata. Estimates of variance of allele frequencies among populations (F _ST ) between TAG and Broken Spur were very low (mean F _ST =0.001), indicating no significant genetic differentiation between these populations although they were separated by 370 km. The number of migrants per generation was estimated from F _ST and by a private-alleles method, and indicates that migration between the two fields exceeds 100 individuals per generation. This may be because of efficient larval or adult migration or a combination of both. Estimates of the correlation between homologous alleles between individuals within local populations (F _IS ) of R. exoculata were high at two enzyme loci and indicate a heterozygote deficiency which caused a significant deviation from genotype frequencies expected under Hardy-Weinberg conditions. This deficiency was caused by the occurrence of rare homozygous genotypes in small individuals. In large individuals, rare alleles decreased in frequency or disappeared completely. This is discussed in relation to previous genetic investigations on other vent and nonvent organisms.     

Spatial and interannual variation in the faunal distribution at Broken Spur vent field (29°N, Mid-Atlantic Ridge)

Initial ecological observations at Broken Spur in 1993 suggested a low biomass relative to other deep-water vent communities known along the Mid-Atlantic Ridge. The persistence of a low shrimp biomass over 15 mo at Broken Spur vents appears to refute the hypothesis that the community is expanding through reproduction and immigration to occupy habitat vacated during a recent period of hydrothermal quiescence or catastrophe. Although the absence of “swarms” of shrimp similar to those found at the hydrothermal mounds of TAG (26°N) and Snake Pit (23°N) is a visually striking feature of the majority of venting structures known at Broken Spur, the biomass of fauna other than shrimp may not be significantly less than that of other Mid-Atlantic sites. The discovery of “swarms” of shrimp at Bogdanov Site, visited for the first time in 1994, suggests that availability of substratum exposed to the flow of hydrothermal fluids, which is a function of the topography of venting structures, may be a prerequisite for the development of these dense aggregations. Two testable predictions arise from this hypothesis. Firstly, dense aggregations of Rimicaris exoculata should occur at any other structures with a morphology similar to Bogdanov Site that may be discovered in the Broken Spur vent field, and should not occur at other isolated chimney structures that may be found. Secondly, “swarms” of shrimp should appear at any Broken Spur chimneys that develop into structures with a morphology more similar to that of Bogdanov Site in future. Received: 2 July 1997 / Accepted: 9 July 1997     

Reproductive ecology of <Emphasis Type="Italic">Fungiacyathus marenzelleri</Emphasis> from 4100 m depth in the northeast Pacific Ocean

Fungiacyathus marenzelleri (Vaughan, 1906) is a deep-water solitary coral, cosmopolitan in distribution that is found at depths of 300–6,328 m. This study examined gametogenesis, inter-annual variability and reproductive periodicity of F. marenzelleri collected from Station M (34°50′N, 123°00′W) in the northeast Pacific at a depth of 4,100 m. Samples were collected (May, June, October 1996; August 1998; February, June 2001; and June 2002) and histologically processed with spermatogenic stage, oocyte size and fecundity measured. Four stages of spermatogenesis were identified and all males contained multiple stages of sperm development in each seasonal sample. Three stages of oocyte development were identified; previtellogenic (<28–150 μm), vitellogenic (150–300 μm) and late vitellogenic (300–400 μm). Comparison of mean oocyte diameters among sampling dates showed there were no inter-annual variations or seasonal differences. Overall, fecundity was 1,290 (±407) oocytes polyp⁻¹, and with no significant differences between sample months. Fecundity was not polyp-size dependent. This study shows a similar quasi-continuous mode of reproduction to this species examined from the Northeast Atlantic Ocean, but the fecundity is reduced by 50%. The reproductive output may fluctuate in relation to the input of organic material at this site, as shown by non-significant trends in the oocyte size-frequency and fecundity data. A quasi-continuous output of gametes would promote successful fertilisation and wide dispersal of the lecithotrophic larvae.     

Complex interactions between autotrophs in shallow marine and freshwater ecosystems: implications for community responses to nutrient stress

The relative biomass of autotrophs (vascular plants, macroalgae, microphytobenthos, phytoplankton) in shallow aquatic ecosystems is thought to be controlled by nutrient inputs and underwater irradiance. Widely accepted conceptual models indicate that this is the case both in marine and freshwater systems. In this paper we examine four case studies and test whether these models generally apply. We also identify other complex interactions among the autotrophs that may influence ecosystem response to cultural eutrophication. The marine case studies focus on macroalgae and its interactions with sediments and vascular plants. The freshwater case studies focus on interactions between phytoplankton, epiphyton, and benthic microalgae. In Waquoit Bay, MA (estuary), controlled experiments documented that blooms of macroalgae were responsible for the loss of eelgrass beds at nutrient-enriched locations. Macroalgae covered eelgrass and reduced irradiance to the extent that the plants could not maintain net growth. In Hog Island Bay, VA (estuary), a dense lawn of macroalgae covered the bottom sediments. There was reduced sediment-water nitrogen exchange when the algae were actively growing and high nitrogen release during algal senescence. In Lakes Brobo (West Africa) and Okeechobee (FL), there were dramatic seasonal changes in the biomass and phosphorus content of planktonic versus attached algae, and these changes were coupled with changes in water level and abiotic turbidity. Deeper water and/or greater turbidity favored dominance by phytoplankton. In Lake Brobo there also was evidence that phytoplankton growth was stimulated following a die-off of vascular plants. The case studies from Waquoit Bay and Lake Okeechobee support conceptual models of succession from vascular plants to benthic algae to phytoplankton along gradients of increasing nutrients and decreasing under-water irradiance. The case studies from Hog Island Bay and Lake Brobo illustrate additional effects (modified sediment-water nutrient fluxes, allelopathy or nutrient release during plant senescence) that could play a role in ecosystem response to nutrient stress.     

Non-viable seasonal settlement of larvae of the upper bathyal brittle star Ophiocten gracilis in the Rockall Trough abyssal

Re-examination of ine structure of postlarvae previously identified as the abyssal species Ophiura ljungmani (Lyman) in a time series of samples taken from 1975 to 1980 from a 2900 m deep permanent station in the southern Rockall Trough (Northeast Atlantic Ocean) has shown the majority of the large summertime peak of brittle-star postlarvae to belong to a second species. Most were incomplete and probably corpses when collected. The few intact specimens present were identical to postlarvae collected in benthic samples from the neighbouring continental slope, where a dense population of the bathyal species Ophiocten gracilis (G. O. Sars) is present from 600 to 1 200 m depth. Examination of population size-structures indicates synchronous reproduction in January/February and annual recruitment to the population. The presence both of Ophiopluteus ramosus and intact postlarvae of Ophiocten gracilis in midwater plankton samples from the vicinity of the permanent station in March/April are thought to derive either from the adjacent slope population or, less probably, from larvae transported in the North Atlantic Current from the Flemish Cap area off Newfoundland. In deep water, viability of these benthic postlarvae is low, none surviving longer than the following winter in the Rockall Trough. These observations suggest a large seasonal transfer from the slope of non-viable larvae and postlarvae as food to the abyssal benthic community.Communicated by J. Mauchline, Oban     

Organic and calorific content of the body tissues of deep-sea elasipodid holothurians in the northeast Atlantic Ocean

Data are presented on the biochemical analysis of protein, lipid, carbohydrate and ash for the ovary, testis, gut and body wall of six species of elasipodid holothurians at a variety of stations in the Porcupine Seabight and Abyssal Plain (northeast Atlantic Ocean). Samples were collected between 1980 and 1982. The species investigated were Benthogone rosea, Laetmogone violacea, Oneirophanta mutabilis, Deima validum, Benthodytes sordida and Psychropotes longicauda. Lipid was the dominant soluble constituent of the ovary and protein was dominant in the testis. Tissue calorific content was determined from the biochemical data and by microbomb calorimetry. The ovaries had higher calorific values than the other body tissues when determined by both methods. Comparison of the two methods suggests that the calorific values for testis, gut and body wall are significantly different, and this may be a function of the calcium-carbonate content of these tissues. Total-body calorific value varied from 24.26 J mg^-1 ash-free dry weight (AFDW) (5 799 cal g^-1 AFDW) to 25.43 J mg^-1 AFDW (6 078 cal g^-1 AFDW). Total holothurian-body calorific biomass at depths of 1 010, 2 000 and 4 000 m is 0.49, 3.69, and 0.25 kJ m^-2 (118, 882, 59.4 cal m^-2), respectively. Holothurians form a significant store of energy in the deep sea.