Oyster Contamination with Human Noroviruses Impacted by Urban Drainage and Seasonal Flooding in Vietnam

This study investigated the level of norovirus contamination in oysters collected at a lagoon receiving urban drainage from Hue City for 17 months (August 2015–December 2016). We also investigated the genetic diversity of norovirus GI and GII in oyster and wastewater samples by using pyrosequencing to evaluate the effect of urban drainage on norovirus contamination of oysters. A total of 34 oyster samples were collected at two sampling sites (stations A and B) in a lagoon. Norovirus GI was more frequently detected than GII (positive rate 79 vs. 41%). Maximum concentrations of GI and GII were 2.4 × 10⁵ and 2.3 × 10⁴ copies/g, respectively. Co-contamination with GI and GII was observed in 35% of samples. Norovirus GII concentration was higher at station A in the flood season than in the dry season (P = 0.04, Wilcoxon signed-rank test). Six genotypes (GI.2, GI.3, GI.5, GII.2, GII.3, and GII.4) were identified in both wastewater and oyster samples, and genetically similar or identical sequences were obtained from the two types of samples. These observations suggest that urban drainage and seasonal flooding contribute to norovirus contamination of oysters in the study area.     

Storm impacts along European coastlines. Part 2: lessons learned from the MICORE project

This paper describes the MICORE approach to quantify for nine field sites the crucial storm related physical hazards (hydrodynamic as well as morphodynamic) in support of early warning efforts and emergency response.As a first step historical storms that had a significant morphological impact on a representative number of sensitive European coastal stretches were reviewed and analysed in order to understand storm related morphological changes and how often they occur around Europe. Next, an on-line storm prediction system was set up to enable prediction of storm related hydro- and morphodynamic impacts. The system makes use of existing off-the-shelf models as well as a new open-source morphological model. To validate the models at least one year of fieldwork was done at nine pilot sites. The data was safeguarded and stored for future use in an open database that conforms to the OpenEarth protocols.To translate quantitative model results to useful information for Civil Protection agencies the Frame of Reference approach ( [Van Koningsveld et al., 2005] and [Van Koningsveld et al., 2007] ) was used to derive Storm Impact Indicators (SIIs) for relevant decision makers. The acquired knowledge is expected to be directly transferred to the civil society trough partnerships with end-users at the end of the MICORE project.     

Integrated assessment of future CAP policies: land use changes,spatial patterns and targeting

The recent and upcoming reforms of the Common Agricultural Policies (CAPs) aim at strengthening the multifunctional role of agriculture, acknowledging the differences in economic, environmental and social potentials within European regions. This paper presents results from an integrated assessment of existing and future policies within the framework set up in the FP6 EU project MEA-Scope. Spatial explicit procedures allow for the MEA-Scope modelling tools to provide information related to regional, environmental and socio-economics settings. The impact of different policy scenarios on structural change, land abandonment and cropping pattern of typical farms has been assessed based on linked agent-based (ABM) and Linear Programming (LP) models at regional and farm scale for two study areas. For the German case study area Ostprignitz-Ruppin (OPR), the issue of policy targeting has been addressed by relating non-commodity outputs (NCOs) to soil quality and protection status. For the Italian case study area (Mugello), changes in landscape patterns in terms of increased fragmentation or homogeneity as affected by changes in agricultural intensity have been analysed using semivariance analysis. The spatial explicit approach highlighted the relevance of case study research in order to identifying response structures and explaining policy implementation patterns.     

Prenatal diagnosis in two cases of de novo complex balanced chromosomal rearrangements. Three-year follow-up in one case

We report two cases of apparently balanced complex de novo chromosomal rearrangements (BCCR) detected prenatally at 17 weeks and 10 weeks of gestation, respectively. Chromosomes were studied using GTG-banding and fluorescent in situ hybridization (FISH). In one case four chromosomes and in the other case three chromosomes were involved in the rearrangements. One of the pregnancies was terminated and no external or internal abnormalities were detected at autopsy. The other pregnancy continued to term. Level III ultrasound examination showed no abnormalities. The child is now 3 years old and has neither congenital anomalies nor evidence of delayed psychomotor development.     

Renatal diagnosis of mosaic tetrasomy 12p/trisomy 12p by fluorescent in situ hybridization in amniotic fluid cells: A case report of pallister–killian syndrome

A prenatally detected case of a rare mosaic tetrasomy 12p/trisomy 12p is reported, presenting as the well-known accessory isochromosome 12p and a supernumerary single 12p marker in 17/24 and 6/24 clones of cultured amniotic fluid cells, respectively. The chromosomal nature of both marker chromosomes was investigated in cultured amniotic fluid cells by fluorescent in situ hybridization with various probes: the 12-centromeric probes pa12H8 and D12Z3, a whole chromosome 12 paint, and the chromosome 12p-specific paint M28. DNA analysis revealed a maternal origin of the extra 12p material. After counselling, the parents requested termination of pregnancy. Inspection and autopsy of the fetus revealed many of the dysmorphisms and internal structural abnormalities of the Pallister–Killian syndrome.