Alkane biodegradation and dynamics of phylogenetic subgroups of sulfate-reducing bacteria in an anoxic coastal marine sediment artificially contaminated with oil

For 503 days, unoiled control and artificially oiled sediments were incubated in situ at 20m water depth in a Mediterranean coastal area. Degradation of the aliphatic fraction of the oil added was followed by GC-MS. At the same time, terminal restriction fragment length polymorphism (T-RFLP) of 16S rRNA encoding genes was used to detect dynamics in the sulfate-reducing bacteria (SRB) community in response to the oil contamination. Specific polymerase chain reaction (PCR) primer sets for five generic or suprageneric groups of SRB were used for PCR amplification of DNA extracted from sediments. During the experiment, hydrocarbons from C(17) to C(30) were significantly degraded even in strictly anoxic sediment layers. Of the five SRB groups, only two groups were detected in the sediments (control and oiled), namely the Desulfococcus-Desulfonema-Desulfosarcina-like group and the Desulfovibrio-Desulfomicrobium-like group. Statistical analysis of community patterns revealed dynamic changes over time within these two groups following the contamination. Significant differences in community patterns were recorded in artificially oiled compared with control sediments. Cloning and sequencing of 16S rRNA encoding genes performed after 503 days showed that many of the most abundant sequences were closely related to hydrocarbonoclastic SRB which could have played an active role in the observed biodegradation of aliphatic hydrocarbons. Results from the present study provide useful information on the dynamics of dominant SRB in heavily oil-contaminated sediments and their potential for anaerobic biodegradation for the treatment of spilled oil in anoxic marine environments.     

Floral scents: their roles in nursery pollination mutualisms

Mutualisms are interspecies interactions in which each participant gains net benefits from interacting with its partner. In nursery pollination mutualisms, pollinators reproduce within the inflorescence they pollinate. In these systems, each partner depends directly on the other for its reproduction. Therefore, the signal responsible for partner encounter is crucial in these horizontally transmitted mutualisms, in which the association between specific partners must be renewed at each generation. As in many other interspecies interactions, chemical signals are suspected to be important in the functioning of these mutualisms. We synthesized and compared the published data available on the role of floral scents in the functioning of the 16 known independently evolved nursery pollination mutualisms. So far, attraction of pollinators to their specific hosts has been investigated in only seven of these systems, and the majority of the studies have been conducted on one of them, fig/fig wasp interactions. While such unevenness of the information limits the potential for meta-analysis, some patterns emerge from this review concerning the role of flower volatiles in maintaining the specificity of pollinator attraction, in signaling the appropriate phenological stage for pollinator visit, in attracting the pollinator toward the rewardless sex in dioecious plant species and in aiding the location and exploitation of resources by parasites and predators associated with these mutualisms. Finally, we highlight new perspectives on the evolution of signals in these diversified systems depending on the age and the degree of specificity of the interaction, and on the effect of phylogenetic inertia on the evolutionary dynamics of plant signals.     

Environmental evaluation of transfer and treatment of excess pig slurry by life cycle assessment

Slurry management is a central topic in the agronomic and environmental analysis of intensive livestock production systems. The objective of this study is to compare the environmental performance of two scenarios of collective slurry management for the disposal of excess nitrogen from animal manure. The scenarios are the transfer of slurry and its injection to crop land, and the treatment of slurry in a collective biological treatment station. The study is based on a real case in the West of France, where a group of farmers is developing a collective plan for the disposal of almost 7000 m(3) of excess pig slurry. The evaluation is carried out by Life Cycle Assessment, where emissions and resource consumption are quantified and aggregated into four environmental impact categories: eutrophication, acidification, climate change, and non-renewable energy use. Ammonia emitted is the most important contributor to acidification and eutrophication, while methane contributes most to climate change. Both ammonia and methane are mostly emitted during the storage of slurry and, in the case of the treatment scenario, also during composting the solid fraction of the slurry. The two management strategies are similar with respect to climate change, whereas eutrophication and acidification are twice as large for treatment relative to transfer. Electricity needed for the treatment process is the main contributor to non-renewable energy use for the treatment scenario, while the transfer scenario represents a net energy saving, as energy saved by the reduction of mineral fertiliser use more than compensates for the energy needed for transport and injection of slurry. The overall environmental performance of transfer is better than that of treatment, as it involves less acidification, eutrophication and non-renewable energy use. The method employed and the results obtained in this study can provide elements for a transparent discussion of the advantages and disadvantages of contrasting excess slurry management scenarios as well as the identification of the main aspects determining their environmental performance.     

Seamount endemism questioned by the geographic distribution and population genetic structure of marine invertebrates

Previous studies have suggested that the high diversity associated with the Norfolk seamounts (Southwest Pacific) could reflect endemism resulting from limited dispersal due to hydrological phenomena. Crustaceans of the family Galatheidae are thoroughly studied in the New Caledonia economic zone permitting the analysis of species distribution pattern between the New Caledonia slope and Norfolk ridge seamounts. This analysis has shown that, qualitatively, the same species are sampled on seamounts and on the New Caledonia slope. Local endemism was never detected. However, on each seamount, and therefore on a small surface, a very high number of species are usually sampled, suggesting that seamounts are biodiversity hot spots. Then, to evaluate whether the seamounts constitute patches of isolated habitat, we explore the pattern of genetic diversity within several species of crustaceans and gastropods. Analysis of the intra-specific genetic structure using the mitochondrial marker COI reveals that populations of two Galatheidae species (Munida thoe and Munida zebra), polymorphic for this marker, are genetically not structured, both among seamounts and between the seamounts and the island slope. The genetic structure over a similar sampling scheme of two Eumunida species (Chirostylidae, the sister family of Galatheidae) and a planktotrophic gastropod (Sassia remensa) reveals a similar pattern. Population structure is observed only in Nassaria problematica, a non-planktotrophic gastropod with limited larvae dispersal. Thus, the limitation of gene flow between seamounts appears to be observed only for species with limited dispersal abilities. Our results suggest that the Norfolk seamounts rather than functioning as areas of endemism, instead, may be highly productive zones that can support numerous species in small areas.     

Effects of petroleum hydrocarbons on the cytochrome P450 content of the mollusc bivalveMytilus galloprovincialis

The cytochrome P₄₅₀, identified by the characteristic 450 nm spectral peak of its carbon monoxide complex, was detected in the hepatopancreatic microsomes ofMytilus galloprovincialis, collected from Ponteau (Bay of Fos, France) in 1982 and 1983. When mussels were exposed to a variety of petroleum hydrocarbons, the cytochrome P₄₅₀ content increased. It is shown that aromatic hydrocarbons are more effective than alkanes in inducing a high level of cytochrome P₄₅₀. The possible use of this haemoprotein in hydrocarbon pollutant detection is discussed.     

Apparent segregation of null alleles ascribed to deletions of the ornithine transcarbamylase gene in congenital hyperammonaemia

Ornithine transcarbamylase (OTC) deficiency is an X-linked disorder of the urea cycle mapped to chromosome Xp21.1. Here, we show that apparent segregation of null alleles at the OTC locus and flanking polymorphic loci mimicked false maternity or false paternity in three affected families. Based on these observations, we suggest giving consideration to gene deletion when dealing with segregation of null alleles in OTC deficiency.     

Burial,exportation and degradation of acyclic petroleum hydrocarbons following a simulated oil spill in bioturbated Mediterranean coastal sediments

A field study was conducted in a French Mediterranean littoral (Gulf of Fos) in order to determine the role of bioturbation processes during the bioremediation of oil-contaminated sediments. Inert particulate tracers (luminophores) and Arabian light crude oil were deposited at the surface of sediment cores incubated in situ for 2, 6 and 12 months. After incubation, luminophores and hydrocarbons presented roughly similar depth distributions in the sediment, showing a continuous burial of material until 55 mm depth. Short-chain (< or = n-C25) n-alkanes were totally removed from the sedimentary column after 6 months, whereas approximately 20% of heavier n-alkanes (e.g. n-C30) and of isoprenoid hydrocarbons (pristane (Pr) and phytane (Ph)) remained at the end of the experiment. The determination of the degradation constant and the turn-over rate of individual hydrocarbon indicated that C17-25 n-alkanes were degraded two to three times faster than longer homologues and than pristane and phytane. Using the 17alpha,21beta-C30-hopane as an internal inert reference, we could demonstrate that, after 12 months of in situ incubation, 55% of the losses of the n-alkanes < or = C25 and 35% of the losses of the heavier n-alkanes and of Pr and Ph were due to biodegradation processes. These results demonstrate that the activity of benthic organisms can have a significant influence on the qualitative and quantitative fate of acyclic hydrocarbons following a petroleum contamination in marine coastal sediments.     

Effects of ultraviolet light (315 nm), temperature and relative humidity on the degradation of polylactic acid plastic films

The influence of temperature (30, 45 and 60 degrees C) and relative humidity (RH) (30%, 50% and 100%) on the degradation of poly(l-lactic acid) (PLA) films were studied. In addition, the effects of ultraviolet (UV) light (315 nm) on the degradation of PLA films were also analyzed. Various analytical techniques were applied to observe changes in the properties of PLA polymer films. FTIR spectroscopy was used as semi-quantitative method to get information about the chemistry of the degradative process. The degradation rate of PLA was enhanced by increasing temperature and RH, factors responsible for a faster reduction of the weight-average molecular weight (M(W)), of the glass transition temperature (Tg) and of the percentage of elongation at break. Moreover, UV treatment accelerated these phenomena.     

Characterization of the liver cytochrome P450 in the marine fish Mugil cephalus and effects of some hydrocarbons on the mixed-function oxidase components

The marine fish Mugil cephalus was caught in the Bay of Marseilles (France) in 1985 and the liver microsomal cytochrome P₄₅₀ was identified at a concentration of about 0.230 nmol mg^-1 protein. Optimal assay conditions were established to measure two mixed-function cytochrome P₄₅₀-dependent oxidases: aniline hydroxylase and p-nitroanisole O-demethylase. Induction of cytochrome P₄₅₀ occurred after exposure of mullet to an aromatic hydrocarbon and a water-soluble petroleum fraction. The liver cytochrome P₄₅₀ was solubilized and purified. The monomer molecular weight of partially purified cytochrome P₄₅₀, determined by sodium dodecyl-sulfate-gel electrophoresis, was 51 000.