Two unbalanced segregation products due to a maternal t(7;16)inv(16)

We report a prenatal case of a maternally inherited abnormal chromosome 16, originally interpreted as a pericentric inversion only, but after family studies re-interpreted as a pericentric inversion (16) accompanied by an unbalanced (7;16) translocation. Because of the inversion 16 and an elder son with developmental delay and craniofacial dysmorphic features, in the past karyotyped as 46,XY, the chromosomes 16 of the mother and son were carefully re-examined. Using a whole chromosome 16 paint and sub-telomere probes of 16p and 16q, the karyotype of the mother was shown to be 46,XX,inv(16)(p11.2q23.2).ish t(7;16)(q36;p13.3)inv(16). Subsequently one chromosome 16 of the elder son appeared to be a der(16)t(7;16)(q36;p13.3). This is probably the result of a meiotic crossover between the chromosomes 16 in the mother. The prenatal karyotype was finally interpreted as 46,XY,inv(16)(p11.2q23.2).ish der(16)t(7;16)(q36;p13.3)inv(16). This is the same cytogenetic imbalance as his elder brother: a partial trisomy of chromosome 7 (q36→qter) and a partial monosomy of chromosome 16 (p13.3→pter). Copyright © 2001 John Wiley & Sons, Ltd.     

Awareness of sea-level response under climate change on the coast of Ghana

In response to climate change, coastal communities are expected to experience increasing coastal impacts of sea-level rise (SLR). Strategies formulated and implemented to curb these impacts can thus be more effective if scientific findings on the response to climate change and SLR impacts on coastal communities are taken into consideration and not based merely on the need for coastal protection due to physical coastal erosion. There is also the need to determine the level of awareness of sea-level rise and responses in coastal communities to improve adaptation planning. This study assesses the impact of future erosion on the coastal land cover of Ghana. This assessment estimates approximately 2.66 km², 2.77 km², and 3.24 km² of coastal settlements, 2.10 km², 2.20 km² and 2.58 km² of lagoons, 1.39 km², 1.46 km² and 1.71 km² of wetlands to be at risk of inundation by the year 2050 based on coastal erosion estimates for the 2.6, 4.5 and 8.5 Representative Concentration Pathways (RCPs) used in the Fifth Assessment Report (AR5) of the Intergovernmental Panel on Climate Change (IPCC). This study also assesses the level of awareness of respondents to SLR on the coast of Ghana and explores the availability and level of integration of scientific knowledge of SLR into coastal adaptation strategies in Ghana. Assessment of the awareness of SLR responses to the changing climate in Ghana is made through semi-structured interviews at national, municipal/district and coastal community scales. Although settlements may be inundated based on the coastal erosion estimates, coastal dwellers interviewed cherish their proximity to the sea and are determined to maintain their occupancy close to the sea as spatial location influences their source of livelihood (fishing). Respondents lack knowledge/understanding of SLR, as the majority of household interviewees attributed the rise or fall in sea level to God. Respondents from Ngiresia alleged that the ongoing coastal sea defence project in their community has led to increased malaria cases.     

Is the WTO after your water? The General Agreement on Trade in Services (GATS) and poor people's right to water

The General Agreement on Trade in Services (GATS) seeks to expand international trade in a wide range of services ranging from tourism to telecommunications and education. In recent years, it has come under attack from civil society organizations in both the North and the South for having a detrimental impact on poor people's right to basic services. This article explores some of these controversies, using the example of water services. It focuses specifically on the impact of the GATS on poor people's right to water and national governments’ ability to safeguard the interests of poor people through regulation. It demonstrates that, de jure, the liberalization of water‐related services under the GATS may not necessarily undermine the ability of governments to introduce the kind of legislative measures necessary to realize poor people's right to water. Still, de facto, the exercise of policy autonomy might be substantially curtailed due to inherent ambiguities in treaty interpretation, the politics of process arising out of power asymmetries, a lack of transparency in processes of negotiation as well as institutional and other deficiencies in the domestic politics of WTO member states.     

Assessment of the Ecological Integrity of Traunsee (Austria) Via Analysis of Sediments and Benthic Microbial Communities

Since nearly one hundred years Traunsee experiences the import of tons of liquid and solid waste originating from salt and soda production. Today, the lake exhibits chloride concentrations of up to 170 mg L^-1 and 19% of the lake floor are directly or indirectly influenced by industrial deposits (ID). Based on the comparison of several microbial parameters in unaffected, directly affected and intermediate lake bottom sediments, the ecological integrity of the lake was evaluated. The highly alkaline ID, which were exclusively colonized by microorganisms, harbored a bacterial community reduced by a factor of 10 in abundance and biomass compared to undisturbed sediment areas within the lake. The bacterial community of ID was furthermore characterized by a reduced content of actively respiring cells (INT-formazan reduction), a lower frequency of dividing cells (FDC) and a significantly reduced cell and biomass production. A 80 to 90% reduction in carbon recycling is estimated for the area exclusively covered by ID. Protists, although occasionally absent from the industrial sediments, were in general found to be less sensitive to the contaminant stress. Differences in alkalinity and dissolved organic carbon (DOC) concentrations of sediment porewaters as well as the total organic content and C/N ratios of sediments partly explain the microbial pattern observed at the various sampling sites. Possible consequences of the continuous industrial tailings for the whole lake ecosystem and the validation of the ecological integrity are discussed.     

Individual preparedness and mitigation actions for a predicted earthquake in Istanbul

This study investigated the process of taking action to mitigate damage and prepare for an earthquake at the individual level. Its specific aim was to identify the factors that promote or inhibit individuals in this process. The study was conducted in Istanbul, Turkey—where an earthquake is expected soon—in May and June 2006 using qualitative methods. Within our conceptual framework, three different patterns emerged among the study subjects. Outcome expectancy, helplessness, a low socioeconomic level, a culture of negligence, a lack of trust, onset time/poor predictability, and normalisation bias inhibit individuals in this process, while location, direct personal experience, a higher education level, and social interaction promote them. Drawing on these findings, the paper details key points for better disaster communication, including whom to mobilise to reach target populations, such as individuals with direct earthquake experience and women.     

Marine Birds as Indicators of Arctic Marine Ecosystem Health: Linking the Northern Ecosystem Initiative to Long-Term Studies

Marine birds are sensitive indicators of the condition of marine ecosystems in the Arctic, partly because they feed at the top of the arctic food chain. The Northern Ecosystem Initiative (NEI) recently supported four separate studies that investigated aspects of Arctic marine bird science which simultaneously addressed goals of the NEI to better understand northern ecosystems and their response to environmental stressors. The projects used both scientific and traditional knowledge to examine the relationship between sea-ice, contaminants, and the ecology of marine birds, and to transfer environmental knowledge to students. Results from these investigations confirm that changes are occurring in Arctic environments, and that these are captured through marine bird research. Collectively these studies provided new data that supported NEI objectives of monitoring the health of the Arctic ecosystem, and contributed to Canada's international obligations for Arctic science.     

Environmental contaminants in Canadian shorebirds

Canadian shorebirds are exposed to environmental contaminants throughout their annual cycle. Contaminant exposure among species varies with diet, foraging behaviour and migration patterns. We sampled twelve species of shorebirds from four locations across Canada to assess their exposure to PCBs, organochlorine pesticides, as well as four trace elements (Hg, Se, Cd, As). SigmaPCB and SigmaDDT followed by SigmaCHL were most frequently found above trace level in the shorebird carcasses. In general, the plover species (American golden, semipalmated, black-bellied) appear to be the most contaminated with organochlorines, whereas Hudsonian and marbled godwits appear to be the least contaminated. Among adult birds, the greater and lesser yellowlegs had the highest hepatic Hg concentrations (2.4-2.7 microg g(-1) dw), whereas American golden plovers as well as Hudsonian and marbled godwits contained relatively low levels of Hg (<1 microg g(-1) dw). Renal Se concentrations varied from 3.2 to 16.7 microg g(-1) dw and exhibited little interspecific or seasonal variation. Renal Cd levels in adult birds were highest in Hudsonian godwits from Quill Lakes (43 microg g(-1) dw) and Cape Churchill (12 microg g(-1) dw), and lowest (0.8-1.5 microg g(-1) dw) in greater and lesser yellowlegs from Cape Churchill and Bay of Fundy. Renal As concentrations varied from 0.06 microg g(-1) dw in golden plovers from Cape Churchill to 4.6 and 5.1 microg g(-1) dw in dunlin samples from the Pacific coast. There is no evidence that contaminants were adversely affecting the shorebirds sampled from the Canadian locations in this study.     

Analysis of currently available data for characterising the risk of engineered nanomaterials to the environment and human health--lessons learned from four case studies

Production volumes and the use of engineered nanomaterials in many innovative products are continuously increasing, however little is known about their potential risk for the environment and human health. We have reviewed publicly available hazard and exposure data for both, the environment and human health and attempted to carry out a basic risk assessment appraisal for four types of nanomaterials: fullerenes, carbon nanotubes, metals, and metal oxides (ENRHES project 2009(1)). This paper presents a summary of the results of the basic environmental and human health risk assessments of these case studies, highlighting the cross cutting issues and conclusions about fate and behaviour, exposure, hazard and methodological considerations. The risk assessment methodology being the basis for our case studies was that of a regulatory risk assessment under REACH (ECHA, 2008(2)), with modifications to adapt to the limited available data. If possible, environmental no-effect concentrations and human no-effect levels were established from relevant studies by applying assessment factors in line with the REACH guidance and compared to available exposure data to discuss possible risks. When the data did not allow a quantitative assessment, the risk was assessed qualitatively, e.g. for the environment by evaluating the information in the literature to describe the potential to enter the environment and to reach the potential ecological targets. Results indicate that the main risk for the environment is expected from metals and metal oxides, especially for algae and Daphnia, due to exposure to both, particles and ions. The main risks for human health may arise from chronic occupational inhalation exposure, especially during the activities of high particle release and uncontrolled exposure. The information on consumer and environmental exposure of humans is too scarce to attempt a quantitative risk characterisation. It is recognised that the currently available database for both, hazard and exposure is limited and there are high uncertainties in any conclusion on a possible risk. The results should therefore not be used for any regulatory decision making. Likewise, it is recognised that the REACH guidance was developed without considering the specific behaviour and the mode of action of nanomaterials and further work in the generation of data but also in the development of methodologies is required.     

Agricultural livelihood transition in the southern Yucatán region: diverging paths and their accompanying land changes

Land change science has demonstrated that rural livelihoods around the world both drive and reflect changing environmental regimes and political economic/structural transformations. This article explores the relationship between increasingly globalized rural livelihoods and in-place land change, assessing results from social surveys of smallholding households in the southern Yucatán region. We examine evidence for a transition in agricultural livelihood strategies as smallholders adjust to changing political economic and institutional conditions, and link these transitioning strategies to land use changes. Based on household surveys in 1997 and 2003, we comparatively assess both changes in the selection of livelihood strategies and in the land use and cover impacts of those strategies. Our results indicate that although impacts of given strategies have changed little over this period, there are increasing proportions of households pursuing two divergent adjustment paths—one of agricultural withdrawal and one of agricultural intensification and commercialization. We investigate what sociodemographic characteristics differentiate the groups of households following distinct livelihood strategies. Our findings point to the possibility of simultaneous and contradictory land change outcomes as smallholders adjust in different ways to their intensified incorporation into global economies.     

Stereochemistry of LinB-catalyzed biotransformation of δ-HBCD to 1R,2R,5S,6R,9R,10S-pentabromocyclododecanol

The haloalkane dehalogenase LinB from Sphingobium indicum B90A converts β-hexachlorocyclohexane (β-HCH), the most persistent HCH stereoisomer, to mono- and dihydroxylated metabolites. Recently, we reported that LinB also transforms α-, β- and γ-hexabromocyclododecanes (HBCDs), which are structurally related to HCHs. Here, we show that LinB catalyzes the hydroxylation of δ-HBCD to two pentabromocyclododecanols (PBCDOHs) and two tetrabromocyclododecadiols (TBCDDOHs). The stereochemistry of this enzymatic transformation was deduced from XRD crystal structure data of the substrate δ-HBCD and α₂-PBCDOH, one of the biotransformation products. Five stereocenters of δ-HBCD are unchanged but the one at C6 is converted to an alcohol with inversion from S- to R-configuration in a nucleophilic, S_N2-like substitution reaction. Only α₂-PBCDOH with the 1R,2R,5S,6R,9R,10S-configuration is obtained but not its enantiomer. With only two of the 64 PBCDOHs formed, these transformations indeed are regio- and stereoselective. A conformational analysis revealed that the triple-turn motive, which is predominant in δ-HBCD and in several other HBCD stereoisomers, is also found in the product. This shows that LinB preferentially converted reactive bromine atoms but not those in the conserved triple-turn motive. The widespread contamination with HCHs triggered the bacterial evolution of dehalogenases which acquired the ability to convert these pollutants and their metabolites. We here demonstrate that LinB of S. indicum also transforms HBCDs regio- and stereoselectively following a similar mechanism.