Workshop report on the extraction of foetal DNA from maternal plasma

Objective Cell free foetal DNA (cff DNA) extracted from maternal plasma is now recognized as a potential source for prenatal diagnosis but the methodology is currently not well standardized. To evaluate different manual and automated DNA extraction methods with a view to developing standards, an International Workshop was performed. Methods Three plasma pools from RhD-negative pregnant women, a DNA standard, real-time-PCR protocol, primers and probes for RHD were sent to 12 laboratories and also to one company (Qiagen, Hilden, Germany). In pre-tests, pool 3 showed a low cff DNA concentration, pool 1 showed a higher concentration and pool 2 an intermediate concentration. Results The QIAamp DSP Virus Kit, the High Pure PCR Template Preparation Kit, an in-house protocol using the QIAamp DNA Blood Mini Kit, the CST genomic DNA purification kit, the Magna Pure LC, the MDx, the M48, the EZ1 and an in-house protocol using magnetic beads for manual and automated extraction were the methods that were able to reliably detect foetal RHD. The best results were obtained with the QIAamp DSP Virus Kit. The QIAamp DNA Blood Mini Kit showed very comparable results in laboratories that followed the manufacturer's protocol and started with ≥ 500 µL plasma. One participant using the QIAamp DNA Blood Midi Kit failed to detect reliably RHD in pool 3. Conclusions This workshop initiated a standardization process for extraction of cff DNA in maternal plasma. The highest yield was obtained by the QIAamp DSP Virus Kit, a result that will be evaluated in more detail in future studies. Copyright © 2007 John Wiley & Sons, Ltd.     

Managing floodplain-forest restoration in European river landscapes combining ecological and flood-protection issues

Throughout Europe the demands for improved flood protection on the one hand and the requirements to maintain and enhance floodplain forests on the other are perceived as conflicting goals in river-basin management, revealing the urgent need for strategies to combine both issues. We developed an interdisciplinary approach for floodplain-forest restoration identifying sites suitable for reforestations from both an ecological and hydraulic point of view. In the ecological module, habitat-distribution models are developed providing information on ecologically suitable sites. In the hydraulic module, a two-dimensional hydrodynamic-numerical model (2D-HN model) delivers the requested hydraulic information. The output of the two models is intersected. Subsequently, in an iterative procedure, the potential of plantings without exceeding critical water levels can be identified by hydraulic evaluation using the 2D-HN-model. The approach is exemplified using two reforestation scenarios at the Elbe River, Germany, showing considerable potential for softwood forest establishment without negative hydraulic effects. The approach reported here provides a solution for a severe conflict in river-basin management that hampers the reestablishment of the strongly threatened floodplain forests in Europe. Alternative measures to enhance floodplain-forest regeneration feasible under certain preconditions are discussed in the context of the current state of European large rivers.     

Financial adaptation to disaster risk in the European Union

Increasing losses from weather related extreme events coupled with limited coping capacity suggest a need for strong adaptation commitments, of which public sector responses to adjustments to actual and expected climate stimuli are key. The European Commission has started to address this need in the emerging European Union (EU) climate adaptation strategy; yet, a specific rationale for adaptation interventions has not clearly been identified, and the economic case for adaptation to extremes remains vague. Basing the diagnosis on economic welfare theory and an empirical analysis of the current EU and member states’ roles in managing disaster risk, we discuss how and where the public sector may intervene for managing climate variability and change. We restrict our analysis to financial disaster management, a domain of adaptation intervention, which is of key concern for the EU adaptation strategy. We analyse three areas of public sector interventions, supporting national insurance systems, providing compensation to the affected post event as well as intergovernmental loss sharing through the EU solidarity fund, according to the three government functions of allocation, distribution, and stabilization suggested by welfare theory, and suggest room for improvement.