Use of non-homogeneous Poisson process (NHPP) in presence of change-points to analyze drought periods: a case study in Brazil

Rain precipitation in the last years has been very atypical in different regions of the world, possibly, due to climate changes. We analyze Standard Precipitation Index (SPI) measures (1, 3, 6 and 12-month timescales) for a large city in Brazil: Campinas located in the southeast region of Brazil, São Paulo State, ranging from January 01, 1947 to May 01, 2011. A Bayesian analysis of non-homogeneous Poisson processes in presence or not of change-points is developed using Markov Chain Monte Carlo methods in the data analysis. We consider a special class of models: the power law process. We also discuss some discrimination methods for the choice of the better model to be used for the rain precipitation data.     

Above- and belowground biomass and nutrient pools of Spartina alterniflora (smooth cordgrass) in a South American salt marsh

In order to examine the role of position in the tidal range on biomass production and nutrient pools in Spartina alterniflora in an Argentinian estuary, we estimated productivity, the concentration of C, N and P in tissues and pools (concentration×biomass) of these elements in low (LM) and high (HM) zones. Aboveground biomass of S. alterniflora was higher in HM than in LM. Aboveground primary productivity was 106 and 439 g dry wt m^?2 year^?1 in LM and HM, respectively. Belowground biomass was similar in LM and HM. Belowground primary productivity was 526 and 744 g dry wt m^?2 year^?1 for LM and HM, respectively. Nutrient pools were higher in HM than in LM. Biomass and productivity values were low, which makes nutrient pools low. The lower values of the parameters analysed in LM than in HM indicate that position in the tidal range is an important factor in this system, possibly due to the effect of flooding. Moreover, this pattern is opposite to the general one observed in the northern hemisphere, meaning that studying marshes from different environments is worth doing. Because pools were higher in HM, this zone would be more important for nutrient input to the estuary.     

Antifungal activity of volatile metabolites emitted by mycelial cultures of saprophytic fungi

The antifungal activity of molecular identified Chilean saprobiontic fungi, Trichoderma viride, Schizophyllum commune and Trametes versicolor, on the fungal plant pathogens Botrytis cinerea and Fusarium oxysporum, and the saprotrophic mould Mucor miehei was investigated using two types of inhibition bioassay: (1) bi-compartmented Petri dishes and (2) two Erlenmeyer flasks connected by their upper parts. The chemical composition of volatile organic compounds (VOCs) released by saprobiontic fungi was also investigated using headspace solid-phase microextraction (SPME) and gas chromatography/mass spectrometry (GC-MS) analysis. Of the saprobiontic fungi evaluated, one isolate of S. commune showed the highest inhibitory activity against B. cinerea and M. miehei, 86.0±5.4 and 99.5±0.5% respectively. The volatile profiles of fungal isolates were shown to contain a different class of compounds. The major components in the headspace of mycelial cultures were 6-pentyl-α -pyrone (T. viride), ethanol and β -bisabolol (S. commune), and a sesquiterpene alcohol (Tr. versicolor). This is the first study reported on the release of VOCs by Chilean native fungi and their antifungal activity wrt. plant pathogenic fungi.     

Changes in glucose uptake rate and in the energy status of PC-12 cells acutely exposed to hexavalent chromium,an established human carcinogen

In the 1920s, Otto Warburg reported a striking metabolic shift in solid tumors: contrary to their normal counter parts, which exhibited a nearly pure respiratory metabolism, where cancer cells relied strongly on lactic fermentation for energy production, even in the presence of ample oxygen. This metabolic shift, later named the Warburg effect, is now viewed as a nearly universal cancer phenotype. To investigate whether it is operating in hexavalent chromium (Cr(VI))-induced carcinogenesis, PC-12 cells were exposed to low Cr(VI) concentrations and effects determined on the rates of glucose uptake, lactate production and oxygen consumption, critical indicators of the type of energy metabolism adopted by the cells. Further, the influence on the cells’ energy charge, an important parameter in the evaluation of the cellular physiological state was assessed. In the presence of ample oxygen, concentration-dependent, statistically significant decreases in the energy charge were detected, which were accompanied by an increased glucose uptake rate. This enhanced uptake may constitute the first step in a compensatory mechanism aimed at counteracting the decrease in energy charge. Although these changes may be too small to exert an impact in the cellular functions, they may provide insight into the initial steps of Cr(VI)-induced carcinogenesis.     

Exponential Collapse of Benthic Depurative Capacity in A Eutrophic Tropical Marine Ecosystem: A Threshold Response to Organic Nitrogen Loading

Microbial decomposition of particulate organic matter in sediments can substantially modulate eutrophication of nearshore marine environments. Flux budgets for nitrogen compounds and quantification of rates of microbial transformation can provide important information on the process of eutrophication. This survey documents sediment nitrogen budgets for a eutrophic nearshore marine environment at La Parguera on southwest coast of Puerto Rico, including consideration of the organic fraction in addition to microbial transformations.

Sediments of the inshore channel at La Parguera denote the input of heavy organic loads with low redox potentials and high ammonium contents. Benthic fluxes of dissolved organic nitrogen are below those recorded for ammonium. These observations suggest that nearshore tropical sediments subject to heavy nitrogen loads act as a sink for organic nitrogen and that ammonification is a key process in the release of nitrogen from sediments to the water column. Nitrification and denitrification rates are low overall and inversely related to the redox potential. Depuration of excess nitrogen through denitrification is ineffective in these sediments. in contrast to more robust temperate environments, our work demonstrates that tropical marine systems are particularly susceptible to eutrophication given their limited capacity for depuration of excess nitrogen.     

Understanding the major drivers for implementation of municipal sustainable policies in underground space

Because of the expanding population in our cities with its demands for more diversified services, we cannot afford a piecemeal type of urban underground growth. Utilization of the urban street system for buried utilities has a serious adverse effect on other street functions because of the continuing necessity to perform excavations for the repair of existing lines and the installation of new ones. The excavations not only are a serious cause of traffic delay and congestion but also create noise and aesthetic disturbances, and result in excessive street maintenance requirements and in shortened overall street life. Consider the enhancing effects in quietness on abutting properties and users of the street, and the benefits become very great. Unfortunately, the lack of data and the difficulty in quantifying the intangibles have made it impossible to arrive at a reasonably accurate figure of overall negative impact on the urban environment of street cuts. However, if drivers are sufficiently strong to merit the use of utility tunnels, then sustainable municipal policies improving living quality will be implemented.     

Endolithic invertebrate communities and bioerosion rates in southwestern Atlantic intertidal consolidated sediments

Organisms boring into intertidal consolidated sediments generate bioerosion. It is generally unknown, however, whether they can significantly contribute to coastline retraction. In this paper, we describe endolithic communities and estimate bioerosion and physical erosion rates at three southwestern Atlantic intertidal sites (37, 38, and 42°S; Argentina). In the northernmost site, we have also analyzed spatial variation in species richness and abundance as a function of height within the tidal slope, orientation of the rock surface in relation to breaking waves (i.e., facing or not), and rock hardness. The number of species and the combined abundance of individuals from the different species were larger at the low intertidal level but did not differ between surface orientations. The density of chemically boring organisms increased with increasing rock hardness and calcium carbonate content. In contrast, no correlation was found between rock hardness and the abundance of organisms that bore by mechanical means. Endolithic community composition and bioerosion rates differed among the three sites, the latter being higher at the site with the softer substrate. Bioerosion estimates were two orders of magnitude lower than physical erosion estimates at each site. The bivalve Lithophaga patagonica was the species that contributed the most to bioerosion at all these locations. While results suggest that bioerosion contributes little to overall coastal erosion at the three study sites, boring organisms might still facilitate physical erosion by weakening the rock either via chemical or mechanical means. Besides, their apparently inconsequential direct action as bioeroders can have positive consequences for biodiversity via increased habitat complexity.     

Tissue distribution of Cd,Cu, Zn,Ni, Cr,Pb and Hg in striated heron,Butorides striatus (Aves: Ardeidae), in a fluvial ecosystem

In this study, the striated heron (Butorides striatus), a species that reproduces in the Middle Paraná River floodplain, was examined for lead, cadmium, chromium, zinc, nickel, mercury and copper concentrations, using liver, kidney, muscle, vertebra and feathers. The results showed low exposure to chromium because all tissue samples had concentrations below the limit of detection. Similar results were obtained for nickel and lead, with the exception of vertebra. This might be associated with either long-term exposure to these metals, or it may be that both nesting and wintering areas are non-polluted. Zinc and copper, both essential metals, were found in all tissues and their concentrations were within the ranges reported in the literature. Mercury was also found in all tissues, but at very low concentrations and even at concentrations below those that produce negative effects in several species of birds (e.g. reproductive success, food intake). Studies of this type are needed to interpret the role of organisms within environments impacted by different human activities.     

Uniform predation risk in nature: common,inconspicuous, and a source of error to predation risk experiments

Previous studies indicate that when predation risk is uniform across habitats, foragers concentrate their exploitation in fewer patches. Although uniform predation risk may seem rare in nature, some scenarios might cause it. Testing all scenarios in a single experiment is unfeasible; therefore, we developed a model that points whether concentration of exploitation in specific habitats due to uniform risk requires parameter values similar to what is found in literature. This model was based on Brown’s (Behav Ecol Sociobiol 22:37–47, 1988) fitness function but rescaled to multiple habitats and predators, including uniform risk predators. Deriving function’s maximum allowed comparisons with giving-up density studies. Results showed that uniform predation risk had a u-shaped effect in habitat exploitation, causing a concentration of habitat exploitation at probabilities of survival from 0.2 to 0.8. However, the length of this interval and degree of concentration depended on the value of safety to forager fitness. Heterogeneous, nonuniform, predation risk decreases habitat exploitation where it was higher, therefore suppressing the effect of uniform risk on prey behavior. Time spent in the focal habitat and metabolic costs reduced the detectability of habitat concentration, while total time did not. We also found that uniform risk reduced accuracy of heterogeneous risk measurements. Future studies should aim to control all possible predators, as even the mild ones can induce complex behavior.     

Effects of three biochars on copper immobilization and soil microbial communities in a metal-contaminated soil using a metallophyte and two agricultural plants

Environmental Geochemistry and Health - Biochar (BC) is a porous, carbonaceous material produced by slow pyrolysis of biomass under oxygen-limited conditions. BC production has been attracting...