Body condition of predatory fishes linked to the availability of sandeels

Lesser sandeels Ammodytes marinus are eaten by a range of predatory fishes including commercially fished species, but are also exploited at large scale by industrial fisheries. Is availability of sandeels, as key prey source, linked to the body condition of predatory fishes? In the North Sea, the largest sandeel biomass is concentrated in the Dogger Bank region. Here we studied predator–sandeel interactions at two sites differing widely in sandeel abundance and local sandeel fishing effort. Surveys took place in 2004, 2005, and 2006, years when local sandeel densities observed at these sites were low, intermediate, and high, respectively. Five predator species––whiting, lesser weever, grey gurnard, plaice, and haddock––showed better body condition indices in either the years or study area (or both) characterised by higher local sandeel densities, when compared to sandeel-poorer conditions. Moreover, whiting, weever, and gurnard condition was better for those individuals actually observed to have eaten sandeels (based on stomach contents) than for those that had not. As body condition relates to growth, reproduction, and survival, predators in sandeel-rich conditions may be inferred to have a higher fitness. These links between sandeel availability, sandeel consumption, and predator condition hint that, if large-scale localised depletions of sandeels were to occur, negative indirect effects on predatory fish might become apparent, underlining the importance of considering the sandeel fishery in an ecosystem context.     

Seasonal distribution patterns of juvenile loggerhead sea turtles (<Emphasis Type="Italic">Caretta caretta</Emphasis>) following capture from a shipping channel in the Northwest Atlantic Ocean

Thirty-four juvenile loggerhead sea turtles captured by trawling from the Charleston, South Carolina (USA), shipping channel (32°42′N; −79°47′W) between May 2004 and August 2007 were tagged with satellite transmitters to assess the extent to which they remained near the capture location given their collection along a seasonal migratory corridor. Seventy-five percent of juveniles were classified as seasonal residents. Migrants predominantly swam north in the spring and nomads wandered south in the summer, but predictive indicators for non-resident status were not identified. All but one juvenile generally remained south of 34°N, within 40 km of shore, and in waters <30 m deep throughout the year. Nine of 14 loggerhead sea turtles monitored during the winter remained exclusively over the continental shelf, three briefly occurred in oceanic habitats, and two foraged extensively in oceanic habitats. Residents distributed >15 km from shore between spring and autumn were three times as likely to occur in oceanic habitats in winter. Modest seasonal movements contrasted with adults tagged at similar latitudes and with juveniles tagged further north and suggest distinct foraging groups within a regional foraging ground.     

Distributional patterns of adult male loggerhead sea turtles (<Emphasis Type="Italic">Caretta caretta</Emphasis>) in the vicinity of Cape Canaveral,Florida, USA during and after a major annual breeding aggregation

Satellite transmitters were attached to 25 reproductively active and four inactive adult male loggerhead sea turtles (86.6–107.0 cm SCLmin) captured from the Port Canaveral, FL, USA shipping channel to assess horizontal and vertical distributions. During the breeding period, male loggerheads aggregated (44% of 755 turtle days) in a 117.6 km² core area that encompassed the shipping channel. Median dive duration during the breeding period was 27 min (IQR = 15–42 min) and males spent 4% (IQR = 3–5%) of the time at the surface, with significantly shorter dives associated with reproductively active males. Migrant and resident males dispersed concurrently, with residents shifting > 30 km east across the continental shelf over a more protracted departure schedule than migrants. Dive duration and time spent at the surface increased through the fall. Cluster analysis revealed the strongest association for dive duration with sea state during and after the breeding period, with significantly longer dives during more turbulent conditions. In contrast, univariate associations with surface interval duration were not elucidated.     

Cryptic species within the commercially most important lobster in the tropical Atlantic, the spiny lobster Panulirus argus

Panulirus argus (Latreille in Ann Mus Hist Nat Paris 3:388–395, 1804) is the lobster of greatest economic importance throughout its distribution. In this study, mitochondrial (Cytochrome Oxidase I and 16S ribosomal genes) and nuclear (Adenine Nucleotide Transporter gene) sequences were used to evaluate the taxonomic status of P. argus sampled from five sites in the Caribbean Sea and nine sites in the Southwest Atlantic. Phylogenetic analyses indicate that lobsters from the two regions form two monophyletic groups with a molecular divergence similar to that observed between distinct congeneric lobster species and much larger than that found between conspecific lobster populations. Therefore, the Caribbean and the Southwest Atlantic lobster populations originally attributed to P. argus belong to different species, with an estimated time of isolation of around 16 Million years. An important consequence of these findings is that the fisheries of spiny lobsters from the Caribbean and the Southwest Atlantic species must be managed separately.     

Speciation and long- and short-term molecular-level dynamics of soil organic sulfur studied by X-ray absorption near-edge structure spectroscopy

We investigated speciation, oxidative state changes, and long- and short-term molecular-level dynamics of organic S after 365 d of aerobic incubation with and without the addition of sugarcane residue using XANES spectroscopy. Soil samples were collected from the upper 15 cm of undisturbed grasslands since 1880, from undisturbed grasslands since 1931, and from cultivated fields since 1880 in the western United States. We found three distinct groups of organosulfur compounds in these grassland-derived soils: (i) strongly reduced (S to S) organic S that encompasses thiols, monosulfides, disulfides, polysulfides, and thiophenes; (ii) organic S in intermediate oxidation (S to S) states, which include sulfoxides and sulfonates; and (iii) strongly oxidized (S) organic S, which comprises ester-SO-S. The first two groups represent S directly linked to C and accounted for 80% of the total organic S detected by XANES from the undisturbed soils. Aerobic incubation without the addition of sugarcane residue led to a 21% decline in organanosulfur compounds directly linked to C and to up to an 82% increase inorganic S directly bonded to O. Among the C-bonded S compounds, low-valence thiols, sulfides, thiophenic S, and intermediate-valence sulfoxide S seem to be highly susceptible to microbial attack and may represent the most reactive components of organic S pool in these grassland soils. Sulfonate S exhibited a much lower short-term reactivity. The incorporation of sugarcane residue resulted in an increase in organosulfur compounds directly bonded to C at the early stage of incubation. However, similar to soils incubated without residue addition, the proportion of organic S directly linked to C continued to decline with increasing duration of aerobic incubation, whereas the proportion of organic S directly bonded to O showed a steady rise.     

Two-year monitoring of Cryptosporidium parvum and Giardia lamblia occurrence in a recreational and drinking water reservoir using standard microscopic and molecular biology techniques

Starting in 2006, a monitoring of Giardia lamblia and Cryptosporidium parvum occurrence was conducted for 2 years in the largest drinking water reservoir of Luxembourg (Esch-sur-S?re reservoir) using microscopy and qPCR techniques. Parasite analyses were performed on water samples collected from three sites: site A located at the inlet of the reservoir, site B located 18 km downstream site A, at the inlet of the drinking water treatment plant near the dam of the reservoir and site C where the finished drinking water is injected in the distribution network. Results show that both parasites are present in the reservoir throughout the year with a higher occurrence of G. lamblia cysts compared to C. parvum oocysts. According to our results, only 25% of the samples positive by microscopy were confirmed by qPCR. (Oo)cyst concentrations were 10 to 100 times higher at site A compared to site B and they were positively correlated to the water turbidity and negatively correlated to the temperature. Highest (oo)cyst concentrations were observed in winter. In contrast, no relationship between the concentrations of (oo)cysts in the reservoir and rain events could be established. Though a correlation has been observed between both parasites and faecal indicators in the reservoir, some discrepancies highlight that the latter do not represent a reliable tool to predict the presence/absence of these pathogenic protozoa. In summer 2007, the maximal risk of parasite infection per exposure event for swimmers in the reservoir was estimated to be 0.0015% for C. parvum and 0.56% for G. lamblia. Finally, no (oo)cysts could be detected in large volumes of finished drinking water.     

Translocation of Sb and Ti in an undisturbed floodplain soil after application of Sb2O3 and TiO2 nanoparticles to the surface

The pore water transport of antimony and titanium, applied as nanoparticles (NPs), was studied by spiking stable suspensions of two different nanomaterials on the surface of an undisturbed floodplain soil. For preparation of stable dispersions, two different strategies were followed. (i) Comparable to those used in industrial applications: titanium dioxide nanoparticles, with an average diameter of 99 nm, were prepared by high-energy ball milling in water, whereas for (ii) antimony trioxide (Sb(2)O(3); average diameter 121 nm) a dispersing agent (sodium salt of poly[(naphthaleneformaldehyde)sulfonate] (pNFS) in water) was used. The upper 17 cm of a floodplain soil (river Rhine, Germany) was sampled using the minimally invasive sediment or fauna incubation experiment (SOFIE? two compartment cell; 3 l volume each), which preserved the pore system of the soil. The cells were equipped with 450 and 100 nm filter probes at different depths providing a non-invasive sampling of the pore water. The pore water was sampled at different times (T = 0, 24, 48, 96 and 196 h) and analysed by inductively coupled plasma quadrupole mass spectrometry (ICP-QMS). Sb and Ti were transported via the pore water of the floodplain soil to a depth of 14 cm, corresponding to the maximum cell depth. The highest Sb concentration in the pore water was detected after 24 h at a depth of 5.5-8 cm. Although the spiked concentration was higher for Ti than for Sb, the total Ti concentration in the pore water of the spiked cell was lower. This indicates a stronger agglomeration of TiO(2) NPs or a more intensive interaction of Ti with the solid matrix and a faster transport of Sb towards deeper soil layers. The results show that metal(loid)s from metal oxide NPs are transported in the soil pore water and, hence, have the potential to act as the source of contamination of deeper soil layers after soil surface contamination.     

Assessing the extinction risk of insular,understudied marine species

Hydrothermal vents are rare deep-sea oases that house faunal assemblages with a similar density of life as coral reefs. Only approximately 600 of these hotspots are known worldwide, most only one-third of a football field in size. With advancing development of the deep-sea mining industry, there is an urgent need to protect these unique, insular ecosystems and their specialist endemic faunas. We applied the IUCN (International Union for the Conservation of Nature) Red List criteria to assess the extinction risk of vent-endemic molluscs with varying exposure to potential deep-sea mining. We assessed 31 species from three key areas under different regulatory frameworks in the Indian, West Pacific, and Southern Oceans. Three vent mollusc species were also examined as case studies of different threat contexts (protected or not from potential mining) to explore the interaction of local regulatory frameworks and IUCN Red List category assignment. We found that these assessments were robust even when there was some uncertainty in the total range of individual species, allowing assessment of species that have only recently been named and described. For vent-endemic species, regulatory changes to area-based management can have a greater impact on IUCN Red List assessment outcomes than incorporating additional data about species distributions. Our approach revealed the most useful IUCN Red List criteria for vent-endemic species: criteria B and D2. This approach, combining regulatory framework and distribution, has the potential to rapidly gauge assessment outcomes for species in insular systems worldwide.     

Spatial variability of infaunal nematode and polychaete assemblages in two muddy subtidal habitats

Spatial variation of populations and their assemblages is an important component of many aspects of ecology, including the maintenance of species diversity. In nature, organisms are generally aggregated in patches or form gradients or other spatially related patterns. This investigation quantified the degree of spatial structure in benthic invertebrate assemblages. It examined the distribution of infaunal assemblages of different size, mobility and contrasting life-history strategies (i.e. meiofaunal nematodes and macrofaunal polychaetes) in two offshore muddy habitats in the Celtic Deep and the NW Irish Sea off the west coast of the United Kingdom. The more heterogeneous habitat in the NW Irish Sea was characterised by higher tidal stress and bottom temperature while greater water depth, mean particle diameter and organic carbon content was typical for the comparatively homogeneous environment in the Celtic Deep. In both habitats, the environmental conditions became increasingly dissimilar with separation. A total of 125 nematode and 88 polychaete species were recorded with 69% of the nematode and 49% of polychaete species present at both study sites. Occurrence frequency of species, species diversity and average similarity of assemblage composition was higher in the Celtic Deep than in the NW Irish Sea. Results from correlation analyses revealed statistically robust relationships of community similarity and sample distance. Given their small size and low mobility, nematodes were more susceptible to within-habitat physical variability than larger-sized, more mobile polychaetes. This, coupled with limits to long-distance dispersal and likely restrictions in gene flow, resulted in a significant decrease in community similarity with distance at the spatial scales sampled (i.e. within 0.1–23 km). Polychaetes, in contrast, combined a higher dispersal potential (>23 km) with a relatively high tolerance to within-habitat environmental variability and these were the most likely causes for non-significant relationships between the similarity of their assemblages and sample distance. The potential mechanisms causing the observed variation and implications of results for environmental management strategies are discussed. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Phylogeography of the Southwestern Atlantic menhaden genus <Emphasis Type="Italic">Brevoortia</Emphasis> (Clupeidae,Alosinae)

Among pelagic fish, the Southwestern Atlantic menhaden genus Brevoortia (Clupeidae, Alosinae) constitutes an important species model to investigate the patterns of genetic differentiation. It is abundant in the Río de la Plata estuary and in the Atlantic coastal lagoons system from Uruguay and Southern Brazil. To access in the taxa discrimination and population structure in Brevoortia we perform a phylogeographic approach based on mitochondrial cytochrome b (cyt-b) sequences including 240 individuals from 16 collecting sites. Among the 720 bp cyt-b sequenced, 199 correspond to variables and 88 to phylogenetically informative sites. High values of haplotype diversity (h = 1.000) and nucleotide diversity (π = 0.061), as well as an average of 0.084 polymorphic segregating sites and 46 different haplotypes were found. Maximum likelihood analysis based on the GTR + I + G model and Bayesian inference strongly support the idea that B. aurea is the only species of the genus inhabiting the Southwestern Atlantic region. Our analyses revealed a complex population pattern characterized by the existence of long-term highly structured genetic assemblages of mixed stocks. Each monophyletic entity included individuals from different collecting sites, different age groups and collected in different years. Our data also suggest that the recruitment of unrelated mtDNA haplotypes carried out by individuals within schools could be occurring in the same nursery areas revealing the existence of many different maternal lineages. A scenario where different simultaneously and successively mixed mtDNA lineages remain historically connected through basal haplotypes among different clades could explains more accurately the complex and ordered metapopulation dynamic found in this pelagic fish.