Carbon flow into the end-products of photosynthesis in short and long incubations of a natural phytoplankton population

During a cruise to the eastern Canadian Arctic (Northern Baffin Bay) in the summer of 1980, we took advantage of the 24-h photoperiod to conduct a 32-h time course experiment of ¹⁴C accumulation under natural solar radiation. The degree of non-linearity in the time course was judged against a time-dependent curve of radioactivity constructed by cumulatively adding the amount of ¹⁴C taken up in sequential short (2 h) incubations of plankton held in a replicate bottle but left unlabelled until removed for assay. Departure from linearity was due first to decreasing rates of ¹⁴C incorporation into polysaccharides and then into lipids. There was a close correspondence between ¹⁴C incorporation into proteins in the 32-h incubation and in the sequence of short incubations. These observations are consistent with patterns in utilization of photosynthetic end-products established from laboratory studies of unicellular algal cultures. Based on parallel or independent control experiments, it was judged that complicating factors such as diel light changes, nitrogenous nutrient exhaustion, bottle size effects or inhibitory conterminants in NaH¹⁴CO₃ stock solutions would not seriously affect our interpretation that non-linearity resulted from catabolic loss of radiocarbon.     

Seasonal and areal changes in standing stocks of phytoplankton,zooplankton and micronekton in the eastern tropical pacific

Five standing stocks were measured together at similar latitudes and longitudes on seasonally repetitive cruises in 3 areas — western, eastern, and southern — of the eastern tropical Pacific. The stocks were chlorophyll a at 0 to 150 m depth (mg/m²), night and day zooplankton at 0 to 200 m depth (ml/1000 m³), and night crustacean micronekton and fish-pluscephalopod micronekton at 0 to 200 m depth (ml/1000 m³). The logarithms of the measurements of each stock in each area were subjected to analysis of variance with the following factors: season (2 month period), latitude, and longitude. Seasonal coverage was most comprehensive, with 7 successive periods, in the western area (approximately 16° N to 3° S latitude, 100° to 122° W longitude). Most stocks in most parts of the western area had a simple seasonal cycle of low amplitude, with a single maximum and minimum that usually differed by a factor <2; some stocks in some parts of the area exhibited no seasonal cycle; all statistically significant cycles, except for fish-plus-cephalopod micronekton, were similar in phase. In the other two areas, located broadly to the east and south of the western area, suitable measurements were made at only 2 periods (opposite seasons) of the year. There were indications of phase differences between chlorophyll a and zooplankton in the eastern area, which should be further investigated. Most standing stocks declined gradually from east to west, and were higher in known upwelling areas and areas of shoal thermocline than elsewhere.     

Effects of eutrophication and sedimentation on juvenile corals

Settlement of juvenile scleractinian corals was investigated from 1987 to 1990 on eutrophic and less eutrophic fringing reefs on the west coast of Barbados, West Indies. The number of coral recruits and number of recruiting coral species on cement blocks decreased with increasing eutrophication of the reefs. This may suggest lower settlement rates on eutrophic reefs, but could also liave resulted from higher post-settlement mortality, since blocks were examined only once after 3 yr of immersion. Coral settlement rates to artificial plates that were checked monthly were also lower on the more eutrophic reefs. This could result from lower local availability of larvae caused by fewer adult corals and/or lower reproductive rates of corals on eutrophic reefs. However, the ratio of coral recruits to adult coral abundance was considerably lower on eutrophic reefs, suggesting that local coral abundance alone can not explain lower settlement rates on eutrophic reefs. The lower rates on eutrophic reefs may result from a lower probability of coral larvae settlin when present, perhaps because of a limited availability of suitable settlement substrate. Colonization of settlement plates by non-coralline organisms was heavier on eutrophic reefs, and unoccupied space was lower, supporting the suggestion that suitable coral settlement substrate may be limiting on eutrophic reefs. Moreover, coralline algae, which facilitate metamorphosis and settlement of coral larvae, were less abundant on settlement plates on eutrophic reefs.     

Estimate of removal rate ofNereis virens (Polychaeta: Nereidae) from an intertidal mudflat by gulls (Larus spp.)

The feeding behavior of herring gulls (Larus argentatus), ringed-billed gulls (L. delawarensis) and great blackbacked gulls (L. marinus) on an intertidal mudflat in Maine, USA, was investigated. Remains of fish, mussels, crabs, insects, and the polychaeteNereis virens were recovered from gull feces. Forty-three percent of the fecal samples containedN. virens jaws, setae, or both. A comparison of jaws from fecal material and from worms collected from the natural community demonstrates that gulls preferentially preyed upon larger worms. Feeding was largely confined to 3 h around low tide, and birds fed mostly in the low intertidal and below mean low water where the largest worms were located. Individual birds remained on the flat for a mean of 28.0 min and consumed a mean of 19.2 worms per visit. It was calculated that gulls remove a mean of 808 largeN. virens from the flat per tide from June to October, representing an estimated 0.04% of the standing crop of largeN. virens.     

Molecular response of the sponge Suberites domuncula to bacterial infection

The aim of this study was the documentation of the molecular immune response of Suberites domuncula upon bacterial infection. Additionally, the bacteria that are naturally present in the sponge after prolonged aquarium maintenance were characterized. After 6 months of maintenance of S. domuncula in seawater aquaria, only one bacterial 16S rDNA sequence could be recovered, which belongs to the genus Pseudomonas. Concomitantly, morphologically uniform bacteria were found encapsulated in bacteriocytes. These findings indicate that certain bacteria, possibly of the genus Pseudomonas, are able to persist for long periods in host bacteriocytes. Subsequent to performing a previously established infection assay with S. domuncula, a potentially pathogenic Vibrio sp. was isolated from the tissues. Furthermore, the host tissue disintegrated and asexual propagation bodies (gemmules) were formed. In order to gain insights into the molecular events occurring after bacterial infection, the stress-response kinases, p38 protein kinase and JNK protein kinase, were analyzed. It is demonstrated that these two kinases are activated (phosphorylated) upon incubation of the tissue with the bacterial endotoxin lipopolysaccharide (LPS). Moreover, LPS strongly inhibits protein synthesis. It is concluded that there are many functionally different interactions between S. domuncula and bacteria and that the animal possesses mechanisms to differentiate between bacteria and to respond accordingly.     

The Novel and Endemic Pathogen Hypotheses: Competing Explanations for the Origin of Emerging Infectious Diseases of Wildlife

Abstract:  Chytridiomycosis, caused by the fungal pathogen Batrachochytrium dendrobatidis , is an emerging infectious disease implicated in declines of amphibian populations around the globe. An emerging infectious disease is one that has recently been discovered; has recently increased in incidence, geography, or host range; or is newly evolved. For any given outbreak of an emerging disease, it is therefore possible to state two hypotheses regarding its origin. The novel pathogen hypothesis states that the disease has recently spread into new geographic areas, whereas the endemic pathogen hypothesis suggests that it has been present in the environment but recently has increased in host range or pathogenicity. Distinguishing between these hypotheses is important, because the conservation measures needed to slow or stop the spread of a novel pathogen are likely to differ from those needed to prevent outbreaks of an endemic pathogen. Population genetics may help discriminate among the possible origins of an emerging disease. Current evidence suggests chytridiomycosis may be a novel pathogen being spread worldwide by carriers; until we know how much genetic variation to expect in an endemic strain, however, we cannot yet conclude that B. dendrobatidis is a novel pathogen.     

PULSE,progressive upper level set scan statistic for geospatial hotspot detection

This paper presents a scan statistic, progressive upper level set (PULSE) scan statistic, for geospatial hotspot detection and its software implementation. Like ULS, the PULSE scan statistic is based on the arbitrarily shaped scan window and can be adapted for a network setting. PULSE is a refinement of the upper level set (ULS) scan statistic. Like some other likelihood based scanning devices, the ULS scan statistic identifies maximum likelihood estimate (MLE) zones that tend to be ‘stringy’ and sprawling. Its search path increases possibility of inclusion of extraneous cells in its MLE zones and, to a smaller extent, of exclusion of cells that belong to a true hotspot from its MLE zone. The PULSE scan statistic achieves improvement over the ULS scan statistic in two ways. First, it begins its search for a most likely zone with a large population of candidate zones obtained by modifying the ULS tree structure and continues its search using a genetic algorithm. Secondly, to reduce chances of generating an MLE that is excessively stringy and that includes extraneous cells in the MLE zone, PULSE uses cardinality and compactness of zones along with their likelihoods as the fitness function in the genetic algorithm and uses several pertinent criteria including evenness of intra-zone cellular response ratios to determine the MLE zone. To reduce computation, Gumbel distribution of extreme values is used to determine the p-value of the MLE zone. Better results come at the cost of increased processing time. An evaluative performance study is presented.