Independent effects of food and predator-mediated processes on annual fecundity in a songbird

We investigated the relative importance and interaction of ecological processes affecting annual fecundity in birds by simultaneously manipulating food availability and nest predation risk in a small songbird, the Wrentit (Chamaea fasciata). From 2000 to 2002 we provided supplemental food to individual Wrentit territories, and during 2002 we altered nest predation risk by providing supplemental food to their principal predators, Western Scrub-Jays (Aphelocoma californica). These experiments were conducted during a period of high interannual variation in rainfall, with 2002 being one of the driest years on record. Food-supplemented Wrentits in a normal predation environment produced an average of 0.54 more fledglings per year than control pairs over the three breeding seasons. During the feeding plus predation manipulation experiment, Wrentit food supplementation and lowered nest predation risk each independently increased the probability that a Wrentit pair would fledge young; however, the interaction between food supplementation and altered nest predation risk was not significant. Thus, even in an extreme drought year, both food and nest predation had equal but independent effects on reproductive success and annual fecundity. Combining supplemental food with reduced nest predation did not result in a synergistic increase in annual fecundity, primarily because Wrentits did not produce multiple broods. Our results suggest that whether food and predation have additive or synergistic effects on reproductive success depends on the life history of the species and the environment in which they live.     

Governing climate change in Dutch cities: anchoring local climate strategies in organisation,policy and practical implementation

Although Dutch cities were among the forerunners in local climate policy, a systematic overview on climate mitigation and adaptation policy is still missing. This study aims to fill this gap by analysing 25 Dutch cities using indicators for the level of anchoring in policy, organisation and practical implementation as well as multi-level relations. Since Tilburg, Amsterdam, Den Haag and Rotterdam show a higher performance than other Dutch cities, these four cities are used as reference cities. The findings suggest that structural integration of climate mitigation and adaptation is limited in Dutch cities. The study points at three recent trends in local climate governance in the Netherlands: (i) decentralisation within municipal organisations, (ii) externalisation initiatives that place climate policy outside the municipal organisation and (iii) regionalisation with neighbouring municipalities and the provincial government.     

The functional biology and trophic role of krill (Thysanoessa raschii) in a Greenlandic fjord

Despite being a key zooplankton group, knowledge on krill biology from the Arctic is inadequate. The present study examine the functional biology and evaluate the trophic role of krill in the Godth?bsfjord (64°N, 51°W) SW Greenland, through a combination of fieldwork and laboratory experiments. Krill biomass was highest in the middle fjord and inner fjord, whereas no krill was found offshore. The dominating species Thysanoessa raschii revealed a type III functional response when fed with the diatom Thalassiosira weissflogii. At food saturation, T. raschii exhibited a daily ration of 1% body C d^?1. Furthermore, T. raschii was capable of exploiting plankton cells from 5 to 400???m, covering several trophic levels of the pelagic food web. The calculated grazing impact by T. raschii on the fjord plankton community was negligible. However, the schooling and migratory behaviour of krill will concentrate and elevate the grazing in specific areas of the euphotic zone.     

Determination of total and partially extractable solid-bound element concentrations using collision/reaction cell inductively coupled plasma-mass spectrometry and their significance in environmental studies

Determination of solid-bound element concentrations is an important initial step in environmental studies especially for assessment of contamination level, and of origin, relative mobility, and fate of contaminants. This study revealed that a relatively new collision/reaction cell inductively coupled plasma-mass spectrometry is a potent tool for determining total and partially extractable solid-bound element (V, Cr, Mn, Fe, Co, Ni, Cu, Zn, As, and Pb) concentrations in a complex matrix solution containing HF and/or HCl. Six different extraction methods commonly used for environmental monitoring studies were tested for their bias and variability using estuarine and marine standard reference materials. Microwave-assisted methods based on concentrated [HNO₃] or [HNO₃?+?HF (4:1)] and [HNO₃?+?HF?+?HCl (10:3:2)] were applied for determining pseudo-total and total element concentrations, respectively. Dilute-acids (1 M HNO₃, 1 M HCl, and 0.5 M HCl) were utilized in single-step partial extraction protocols. Except the 0.5 M HCl cold-extraction method which was performed at room temperature, other partial extraction protocols used microwave-digestion. This study demonstrated that the use of microwave-assisted methods in studies aimed at determining the non-residual, non-specific extractable fractions of elements in solid environmental samples may result in overestimation, and thus needs to be re-examined. We believe that the cold extraction method will play a significant role in future environmental monitoring studies. Nevertheless, results of the cold extraction method not accompanied with total element concentrations have limited value, as the amount of extraction may vary significantly with the nature (origin) of the elements, and with the types of the samples. Therefore, we suggest combining microwave-assisted total digestion and 0.5 M HCl cold-extraction methods as a relatively cost- and time-effective, environmentally sound screening procedure for routine environmental monitoring programs involving a large number of samples from diverse geological and anthropogenic settings.     

The toxicity of copper contaminated soil using a gnotobiotic Soil Multi-species Test System (SMS)

A gnotobiotic multi-species study was designed to consist of a food-web of soil-dwelling animals. The food-web was exposed to five concentrations copper (Cu) spiked soil for three exposure durations i.e. 28, 56 and 84 days. Based on multivariate analysis the food-web was significantly affected by Cu exposure at and above 300 mg Cu kg(-1) soil (lowest tested concentration). The number of animals present in the 2500 mg Cu kg(-1) (highest tested concentration) was at all sampling occasions below the starting point level. Based on analysis of the individual species the lowest 10% effect concentration (EC10) observed was 50 mg Cu kg(-1) soil, for Enchytraeus crypticus. Using the EC10 for the individual species the HC5 (Hazard Concentration at the 5% level) was estimated to be between 25 and 36 mg Cu kg(-1) soil, depending on the exposure duration. A similar experiment but using a reduced design was performed employing soil contaminated with Cu in the field more than 80 years ago. The trend in the field-contaminated soil was similar to that observed for the spiked soil.     

Use of carrion fly iDNA metabarcoding to monitor invasive and native mammals

Severely fragmented habitats increase the risk of extirpation of native mammal populations through isolation, increased edge effects, and predation. Therefore, monitoring the movement of mammal populations through anthropogenically altered landscapes can inform conservation. We used metabarcoding of invertebrate-derived DNA (iDNA) from carrion flies (Calliphoridae and Sarcophagidae) to track mammal populations in the wheat belt of southwestern Australia, where widespread clearing for agriculture has removed most of the native perennial vegetation and replaced it with an agricultural system. We investigated whether the localization of the iDNA signal reflected the predicted distribution of 4 native species—echidna (Tachyglossus aculeatus), numbat (Myrmecobius fasciatus), woylie (Bettongia penicillata), and chuditch (Dasyurus geoffroii)—and 2 non-native, invasive mammal species—fox (Vulpes vulpes) and feral cat (Felis catus). We collected bulk iDNA samples (n = 150 samples from 3428 carrion flies) at 3 time points from 3 conservation reserves and 35 road edges between them. We detected 14 of the 40 mammal species known from the region, including our target species. Most detections of target taxa were in conservation reserves. There were a few detections from road edges. We detected foxes and feral cats throughout the study area, including all conservation reserves. There was a significant difference between the diversity (F_3, 98 = 5.91, p < 0.001) and composition (F_3, 43 = 1.72, p < 0.01) of taxa detections on road edges and conservation reserves. Conservation reserves hosted more native biodiversity than road edges. Our results suggest that the signals from iDNA reflect the known distribution of target mammals in this region. The development of iDNA methods shows promise for future noninvasive monitoring of mammals. With further development, iDNA metabarcoding could inform decision-making related to conservation of endangered taxa, invasive species management, and impacts of habitat fragmentation.     

Derivation of predicted no effect concentrations (PNEC) for 2,4,6-trichlorophenol based on Chinese resident species

2,4,6-Trichlorophenol (2,4,6-TCP) is a common chemical intermediate and a by-product of water chlorination and combustion processes, and is a priority pollutant of the aquatic environment in many countries. Although information on the toxicity of 2,4,6-TCP is available, there is a lack of information on the predicted no-effect concentration (PNEC) of 2,4,6-TCP, mainly due to the shortage of chronic and site-specific toxicity data. In the present study, acute and sub-chronic toxicity of 2,4,6-TCP on six different resident Chinese aquatic species were determined. PNEC values were calculated and compared by use of two approaches: assessment factor (AF) and species sensitivity distribution (SSD). Values for acute toxicity ranged from 1.1 mg L⁻¹ (Plagiognathops microlepis) to 42 mg L⁻¹ (Corbicula fluminea) and the sub-chronic no observed effect concentrations (NOECs) ranged from 0.05 mg L⁻¹ (Mylopharyngodon piceus) to 2.0 mg L⁻¹ (C. fluminea). PNECs obtained by the assessment factor approach with acute (AF = 1000, 0.001 mg L⁻¹) or chronic (AF = 10, 0.005 mg L⁻¹) toxicity data were one order of magnitude less than those from SSD methods (0.057 mg L⁻¹). PNEC values calculated using SSD methods with a 50% certainty for 2,4,6-TCP was less than those obtained by use of the USEPA recommend final chronic value (FCV) method (0.097 mg L⁻¹) and the one obtained by use of the USEPA recommend acute-to-chronic (ACR) methods (0.073 mg L⁻¹). PNECs derived using AF methods were more protective and conservative than that derived using SSD methods.     

An enhanced compost temperature sampling framework: Case study of a covered aerated static pile

Spatial and temporal temperature variations exist in a compost pile. This study demonstrates that systematic temperature sampling of a compost pile, as is widely done, tends to underestimate these variations, which in turn may lead to false conclusions about the sanitary condition of the final product. To address these variations, a proper scheme of temperature sampling needs to be used. A comparison of the results from 21 temperature data loggers randomly introduced into a compost pile with those from 20 systematically introduced data loggers showed that the mean, maximum and minimum temperatures in both methods were very similar in their magnitudes. Overall, greater temperature variation was captured using the random method. In addition, 95% of the probes introduced systematically had attained thermophilic sanitation conditions (?55 °C for three consecutive days), as compared to 76% from the group that were randomly introduced. Furthermore, it was found that, from a statistical standpoint, readings from at least 47 randomly introduced temperature loggers are necessary to capture the observed temperature variation. Lastly, the turning of the compost pile was found to increase the chance that any random particle would be exposed to the temperature ?55 °C for three consecutive days. One turning was done during the study, and it increased the probability from 76% to nearly 85%. Using the Markov chain model it was calculated that if five turnings had been implemented on the evaluated technology, the likelihood that every particle would experience the required time–temperature condition would be 98%.     

GIS-based niche modeling for mapping species' habitat

Ecological "niche modeling" using presence-only locality data and large-scale environmental variables provides a powerful tool for identifying and mapping suitable habitat for species over large spatial extents. We describe a niche modeling approach that identifies a minimum (rather than an optimum) set of basic habitat requirements for a species, based on the assumption that constant environmental relationships in a species' distribution (i.e., variables that maintain a consistent value where the species occurs) are most likely to be associated with limiting factors. Environmental variables that take on a wide range of values where a species occurs are less informative because they do not limit a species' distribution, at least over the range of variation sampled. This approach is operationalized by partitioning Mahalanobis D2 (standardized difference between values of a set of environmental variables for any point and mean values for those same variables calculated from all points at which a species was detected) into independent components. The smallest of these components represents the linear combination of variables with minimum variance; increasingly larger components represent larger variances and are increasingly less limiting. We illustrate this approach using the California Gnatcatcher (Polioptila californica Brewster) and provide SAS code to implement it.