MORPH—An individual-based model to predict the effect of environmental change on foraging animal populations

This paper describes an individual-based model, MORPH, that has been designed to predict the effect of environmental change on foraging animal populations. The key assumptions of MORPH are that individuals within populations behave in order to maximise their perceived fitness, but that perceived fitness may not always be positively related to the actual chances of survival and reproduction. MORPH has been parameterised for coastal birds on several European sites and predicted the effect of environmental change, caused by factors such as habitat loss, disturbance from humans and sea-level rise, on the survival and body condition of these species. However, MORPH contains a basic framework to describe animal physiology and foraging behaviour, and the distribution and abundance of the resources required by these animals. Therefore, MORPH is not restricted to coastal birds, and is potentially applicable to a wider range of systems. To be applied to a forager system, MORPH requires parameters describing (i) the distribution of the food supply and how food quality and abundance changes through time; (ii) the rate at which foragers consume food given the abundance of food and competitors; (iii) the amount of food the forager must consume each day to survive; (iv) the distribution and seasonal changes in other factors which influence the foraging behaviour and survival of foragers. The purpose of this paper is to (i) describe MORPH, (ii) give examples of its application, (iii) describe the types of systems to which MORPH can be applied, and (iv) publish its source code and a user guide.     

Interspecific acoustic interactions of the neotropical treefrog Hyla ebraccata

Summary Hyla ebraccata, H. microcephala and H. phlebodes commonly occur together in Panama. The three species have calls exhibiting broad frequency overlap and call during the same season and time of day from similar microhabitats, frequently in close proximity. The vocal repertoires of the three species are structurally and functionally similar. All employ multi-part advertisement and aggressive calls which consist of a primary note followed by a variable number of clicks. H. ebraccata males often responded to heterospecific calls with multi-note synchronized responses, and calls with primary notes greater than 150–200 ms were most effective in eliciting synchrony. Playback experiments with synthetic 1-note advertisement calls of different durations and both synthetic 1-note advertisement calls and 200 ms tones of different frequencies demonstrated that H. ebraccata males will synchronize with stimuli which are similar in frequency and duration to conspecific calls. Data from a two-choice experiment with female H. ebraccata demonstrate that calls of individual H. microcephala can reduce the attractiveness of a H. ebraccata male's calls if primary notes overlap. By synchronizing response calls to those of H. microcephala, a H. ebraccata may reduce the chances that his calls are rendered less attractive to potential mates.Aggressive calls of these species are graded and are characterized by higher pulse repetition rates and often longer durations than advertisement calls. H. ebraccata males respond to aggressive calls of H. microcephala and H. phlebodes as they do to their own calls. Heterospecific aggressive interactions probably occur because the species interfere acoustically. Our results demonstrate that H. ebraccata males behave in ways which enhance their ability to communicate in a noisy assemblage of conspecific and heterospecific males.     

An overview of reproductive carrier screening panels for autosomal recessive and/or X-linked conditions: How much do we know?

Background & Aim

Reproductive carrier screening seeks to identify couples at a high risk of having offspring affected by autosomal recessive and X-linked (XL) conditions. The aim of this paper is to provide a comprehensive overview of existing carrier screening panels by examining their gene content and characteristics, identifying the most common genes/conditions included in these panels, and analyzing their listed prices.

Methods

A comprehensive evaluation of existing carrier screening panels was conducted by searching for web-based content, reviewing information brochures, and establishing direct contact with the providers via email or phone.

Results

Twenty-two panels and their providers were identified with a cumulative total of 2205 unique genes. The number of genes included in these panels varied from 44 to 2054. Only 15 genes (0.7%) were included in all the panels. The carrier frequency of these 15 common genes and their associated conditions varied greatly, but the conditions associated with the genes are “severe”. The price of these 22 panels ranged from $349 to $4320 per couple (USD in 2023). The correlation between the listed price and the number of selected genes among these panels was small and not statistically significant (r = 0.1023, p = 0.6959).

Conclusion

Considerable discrepancies exist among carrier screening panels. Ongoing research and monitoring are necessary to capture the dynamic nature of the carrier screening landscape, providing up-to-date information for clinical practice and informed decision-making.     

Alternative poultry litter storage for improved transportation and use as a soil amendment

Transportation of poultry litter out of nutrient limited watersheds such as the Illinois River basin (eastern Oklahoma) is a logical solution for minimizing phosphorus (P) losses from soils to surface waters. Transportation costs are basedon mass of load and distance transported. This study investigated an alternative litter storage technique designed to promote carbon (C) degradation, thereby concentrating nutrients for the purpose of decreasing transportation costs through decreased mass. Poultry litter was stored in 0.90-Mg conical piles under semipermeable tarps and adjusted to 40% moisture content, tested with and without addition of alum (aluminum sulfate). additional study was conducted using 3.6-Mg piles under the same conditions, except tested with and without use of aeration pipes. Samples were analyzed before and after (8 wk) storage. Litter mass degradation (i.e., loss in mass due to organic matter decomposition) was estimated on the basis of changes in litter total P contents. Additional characterization included pH, total nutrients, moisture content, total C, and degree of humification. Litter storage significantly decreased litter mass (16 to 27%), concentrated nutrients such as P and potassium (K) and increased proportion of fulvic and humic acids. The addition of aeration pipes increased mass degradationrelative to piles without aeration pipes. Nitrogen volatilization losses were minimized with alum additions. Increases in P and K concentrations resulted in greater monetary value per unit mass compared with fresh litter. Such increases translate to increased litter shipping distance and cost savings of $17.2 million over 25 yr for litter movement out of eastern Oklahoma.     

Improving suspended sediment measurements by automatic samplers

Suspended solids either as total suspended solids (TSS) or suspended sediment concentration (SSC) is an integral particulate water quality parameter that is important in assessing particle-bound contaminants. At present, nearly all stormwater runoff quality monitoring is performed with automatic samplers in which the sampling intake is typically installed at the bottom of a storm sewer or channel. This method of sampling often results in a less accurate measurement of suspended sediment and associated pollutants due to the vertical variation in particle concentration caused by particle settling. In this study, the inaccuracies associated with sampling by conventional intakes for automatic samplers have been verified by testing with known suspended sediment concentrations and known particle sizes ranging from approximately 20 μm to 355 μm under various flow rates. Experimental results show that, for samples collected at a typical automatic sampler intake position, the ratio of sampled to feed suspended sediment concentration is up to 6600% without an intake strainer and up to 300% with a strainer. When the sampling intake is modified with multiple sampling tubes and fitted with a wing to provide lift (winged arm sampler intake), the accuracy of sampling improves substantially. With this modification, the differences between sampled and feed suspended sediment concentration were more consistent and the sampled to feed concentration ratio was accurate to within 10% for particle sizes up to 250 μm.     

How well does XAD resin extraction recover halogenated disinfection byproducts for comprehensive identification and toxicity testing?

Halogenated disinfection byproducts (DBPs) are an unintended consequence of drinking water disinfection, and can have significant toxicity. XAD resins are commonly used to extract and enrich trace levels of DBPs for comprehensive, nontarget identification of DBPs and also for in vitro toxicity studies. However, XAD resin recoveries for complete classes of halogenated DBPs have not been evaluated, particularly for low, environmentally relevant levels (ng/L to low µg/L). Thus, it is not known whether levels of DBPs or the toxicity of drinking water might be underestimated. In this study, DAX-8/XAD-2 layered resins were evaluated, considering both adsorption and elution from the resins, for extracting 66 DBPs from water. Results demonstrate that among the 7 classes of DBPs investigated, trihalomethanes (THMs), including iodo-THMs, were the most efficiently adsorbed, with recovery of most THMs ranging from 50%-96%, followed by halonitromethanes (40%-90%). The adsorption ability of XAD resins for haloacetonitriles, haloacetamides, and haloacetaldehydes was highly dependent on the individual species. The adsorption capacity of XAD resins for haloacetic acids was lower (5%-48%), even after adjusting to pH 1 before extraction. Recovery efficiency for most DBPs was comparable with their adsorption, as most were eluted effectively from XAD resins by ethyl acetate. DBP polarity and molecular weight were the two most important factors that determine their recovery. Recovery of trichloromethane, iodoacetic acid, chloro- and iodo-acetonitrile, and chloroacetamide were among the lowest, which could lead to underestimation of toxicity, particularly for iodoacetic acid and iodo-acetonitrile, which are highly toxic.     

Ecotoxicology of glyphosate and recent advances in its mitigation by adsorption

Environmental Science and Pollution Research - Glyphosate (N-[phosphonomethyl]glycine) is one of the most popular herbicides now used in agricultural practice. The aim of this paper was to discuss...     

Investigating the chromium status,heavy metal contamination,and ecological risk assessment via tannery waste disposal in sub-Saharan Africa (Kenya and South Africa)

Environmental Science and Pollution Research - To mitigate the negative environmental and public health concerns associated with increased industrial discharges amid the rapid industrial growth,...     

Etiology of fatal thoracic aortic injuries: Secondary data analysis

Objectives: Motor vehicle crashes remain a leading cause of death in the United States (US). Thoracic aortic dissection due to blunt trauma remains a major injury mechanism, and up to 90% of these injuries result in death on the scene. The objective of this study is to understand the modern risk factors and etiology of fatal thoracic aortic injuries in the current US fleet.

Methods: Using a unique, linked, Fatality Analysis Reporting System (FARS) and Multiple Cause of Death (MCOD) database from 2000–2010, 144,169 drivers over 16 years of age who suffered fatal injuries were identified. The merged database provides an unparalleled fidelity for identifying thoracic aortic injuries due to motor vehicle accidents. Thoracic aortic injuries were defined by ICD-10 codes S250. Univariate and multivariate logistic regression models for presence of any thoracic aortic injuries were fitted. Age, gender, BMI weight categories, vehicle class, model year, crash type/direction, severity of crash damage, airbag deployment location, and seatbelt use, fatal injury codes, and location of injury were considered. Odds ratios (OR) and corresponding 95% confidence intervals (95%CI) are calculated.

Results: There were 2953 deaths (2.10%) related to thoracic aortic injuries that met the inclusion criteria. Nearside crashes were associated with an increased odds (OR = 1.42, 1.1-1.83), while rollover crashes (OR =.44,.29-.66) were associated with a reduced odds of fatal thoracic aortic injury. Using backward selection on the full multivariate model, the only significant model effects that remained were vehicle type, crash type, body region, and injury type.

Conclusions: The increased prevalence of fatal thoracic aortic injury in nearside crashes, increasing age, and vehicle type provide some insight into the current US fleet. Important factors, including model year, had significantly lower levels of the injury in univariate analysis, demonstrating the effect of safety improvements in newer model vehicles. Further study of this fatal injury is warranted, including comparisons of those who survive the injury.     

Evaluation of health benefit using BenMAP-CE with an integrated scheme of model and monitor data during Guangzhou Asian Games

Guangzhou is the capital and largest city(land area:7287 km2)of Guangdong province in South China.The air quality in Guangzhou typically worsens in November due to unfavorable meteorological conditions for pollutant dispersion.During the Guangzhou Asian Games in November 2010,the Guangzhou government carried out a number of emission control measures that significantly improved the air quality.In this paper,we estimated the acute health outcome changes related to the air quality improvement during the 2010 Guangzhou Asian Games using a next-generation,fully-integrated assessment system for air quality and health benefits.This advanced system generates air quality data by fusing model and monitoring data instead of using monitoring data alone,which provides more reliable results.The air quality estimates retain the spatial distribution of model results while calibrating the value with observations.The results show that the mean PM_2.5concentration in November 2010 decreased by 3.5μg/m~3 compared to that in 2009 due to the emission control measures.From the analysis,we estimate that the air quality improvement avoided 106 premature deaths,1869 cases of hospital admission,and 20,026 cases of outpatient visits.The overall cost benefit of the improved air quality is estimated to be 165 million CNY,with the avoided premature death contributing 90%of this figure.The research demonstrates that Ben MAP-CE is capable of assessing the health and cost benefits of air pollution control for sound policy making.