Meta-analyses and mega-mistakes: calling time on meta-analysis of the species richness-productivity relationship

The form of the species richness-productivity relationship (SRPR) is both theoretically important and contentious. In an effort to distill general patterns, ecologists have undertaken meta-analyses, within which each SRPR data set is first classified into one of five alternative forms: positive, humped (unimodal), negative, U-shaped (unimodal), and no relationship. Herein, I first provide a critique of this approach, based on 68 plant data sets/ studies used in three meta-analyses published in Ecology. The meta-analyses are shown to have resulted in highly divergent outcomes, inconsistent and often highly inappropriate classification of data sets, and the introduction and multiplication of errors from one meta-analysis to the next. I therefore call on the ecological community at large to adopt a far more rigorous and critical attitude to the use of meta-analysis. Second, I develop the argument that the literature on the SRPR continues to be bedeviled by a common failing to appreciate the fundamental importance of the scale of analysis, beginning with the confusion evident between concepts of grain, focus, and extent. I postulate that variation in the form of the SRPR at fine scales of analysis owes much to artifacts of the sampling regime adopted. An improved understanding may emerge from combining sampling theory with an understanding of the factors controlling the form of species abundance distributions and species accumulation curves.     

Nationwide risk factors for hospital readmission for subsequent injury after motor vehicle crashes

Abstract

Objective: Some drivers involved in motor vehicle crashes across the United States may be identified as at risk of subsequent injury by a similar mechanism. The purpose of this study was to perform a national review of the risk factors for hospitalization for a new injury due to a subsequent motor vehicle crash. It was hypothesized that presenting to a different hospital after subsequent injury would result in worse patient outcomes when compared to presentation at the same hospital.

Methods: The Nationwide Readmissions Database for 2010–2014 was queried for all inpatient hospitalizations with injury related to motor vehicle traffic. The primary patient outcome of interest was subsequent motor vehicle crash–related injury within 1 year. The secondary patient outcomes were different hospital subsequent injury presentation, higher Injury Severity Score (ISS), longer length of stay (LOS), and in-hospital death after subsequent injury. The analysis of secondary patient outcomes was performed only on patients who were reinjured. Univariable analysis was performed for each outcome using all variables during the index admission. Multivariable logistic regression was performed using all significant (P < .05) variables on univariate analysis. Results were weighted for national estimates.

Results: During the study period, 1,008,991 patients were admitted for motor vehicle–related injury; 12,474 patients (1.2%) suffered a subsequent injury within 1 year. From the reinjured patients, 32.9% presented to a different hospital, 48.9% had a higher ISS, and 22.1% had a longer LOS. The in-hospital mortality rate after subsequent injury was 1.1%. Presentation to a different hospital for subsequent injury was associated with a longer LOS (odds ratio [OR]?=?1.32; 95% confidence interval [CI], 1.20–1.45; P < .01) and a higher ISS (OR?=?1.38; 95% CI, 1.27–1.49; P < .01). Motorcyclists were more likely to suffer subsequent injury (OR?=?1.39; 95% CI, 1.32–1.46; P < .01) and motorcycle passengers were more likely to present to a different hospital with a subsequent injury (OR?=?2.49; 95% CI, 1.73–3.59; P < .01). Alcohol abuse was associated with subsequent injury (OR?=?1.12; 95% CI, 1.07–1.18; P < .01).

Conclusions: Nearly a third of patients suffering subsequent motor vehicle crash–related injury after an initial motor vehicle crash in the United States present to a different hospital. These patients are more likely to suffer more severe injuries and longer hospitalizations due to their subsequent injury. Future efforts to prevent these injuries must consider the impact of this fragmentation of care and the implications for quality and cost improvements.     

Ambient Air Quality at the Site of a Former Manufactured Gas Plant

Prior to the 1950's, manufactured gas was commerciallyproduced from the pyrolysis of coal, coke, and oil atfacilities that are termed manufactured gas plants (MGPs). The constituents of residual coal tar present on many MGPsites are an environmental health concern because of theirtoxicity and the possibility for their off-site migration viawater and air. Atmospheric concentrations of five volatileorganic compounds (VOCs, e.g., benzene), sixteen polycyclicaromatic hydrocarbons (PAHs, e.g., naphthalene), and particulate matter less than 10 microns in aerodynamicdiameter (PM₁₀) were measured at the site of a former MGP. Air samples were obtained before, during, and after excavationof subterranean coal tar at the site. The results of thisinvestigation indicate that subterranean coal tar was not aprimary source of VOCs and PAHs in the local atmosphere beforeor after remediation of the site. However, excavation,treatment, blending, and transfer of the coal tar duringremediation generated concentrations of selected aromatic andsemi-volatile organic compounds that were substantiallygreater than typical ambient levels. In addition, these datasuggest that blending and mixing of coal tars could lead toexceedance of the U.S. National Ambient Air Quality Standardfor PM₁₀, although additional research is required to fullyevaluate this possibility. Nuisance odors associated with thesite remediation were likely the result of naphthalene andpossibly isomers of xylene. Air pollutant concentrationsmeasured adjacent to the excavation area and at the siteperimeter during remediation activities were less than therelevant occupational and environmental exposure limits.     

Climate Change Adaptation for the US National Wildlife Refuge System

Since its establishment in 1903, the National Wildlife Refuge System (NWRS) has grown to 635 units and 37 Wetland Management Districts in the United States and its territories. These units provide the seasonal habitats necessary for migratory waterfowl and other species to complete their annual life cycles. Habitat conversion and fragmentation, invasive species, pollution, and competition for water have stressed refuges for decades, but the interaction of climate change with these stressors presents the most recent, pervasive, and complex conservation challenge to the NWRS. Geographic isolation and small unit size compound the challenges of climate change, but a combined emphasis on species that refuges were established to conserve and on maintaining biological integrity, diversity, and environmental health provides the NWRS with substantial latitude to respond. Individual symptoms of climate change can be addressed at the refuge level, but the strategic response requires system-wide planning. A dynamic vision of the NWRS in a changing climate, an explicit national strategic plan to implement that vision, and an assessment of representation, redundancy, size, and total number of units in relation to conservation targets are the first steps toward adaptation. This adaptation must begin immediately and be built on more closely integrated research and management. Rigorous projections of possible futures are required to facilitate adaptation to change. Furthermore, the effective conservation footprint of the NWRS must be increased through land acquisition, creative partnerships, and educational programs in order for the NWRS to meet its legal mandate to maintain the biological integrity, diversity, and environmental health of the system and the species and ecosystems that it supports.     

U.S. Natural Resources and Climate Change: Concepts and Approaches for Management Adaptation

Public lands and waters in the United States traditionally have been managed using frameworks and objectives that were established under an implicit assumption of stable climatic conditions. However, projected climatic changes render this assumption invalid. Here, we summarize general principles for management adaptations that have emerged from a major literature review. These general principles cover many topics including: (1) how to assess climate impacts to ecosystem processes that are key to management goals; (2) using management practices to support ecosystem resilience; (3) converting barriers that may inhibit management responses into opportunities for successful implementation; and (4) promoting flexible decision making that takes into account challenges of scale and thresholds. To date, the literature on management adaptations to climate change has mostly focused on strategies for bolstering the resilience of ecosystems to persist in their current states. Yet in the longer term, it is anticipated that climate change will push certain ecosystems and species beyond their capacity to recover. When managing to support resilience becomes infeasible, adaptation may require more than simply changing management practices—it may require changing management goals and managing transitions to new ecosystem states. After transitions have occurred, management will again support resilience—this time for a new ecosystem state. Thus, successful management of natural resources in the context of climate change will require recognition on the part of managers and decisions makers of the need to cycle between “managing for resilience” and “managing for change.”     

Organochlorine pesticide and heavy metal residues in some edible biota collected from Quanzhou Bay and Xinghua Bay, Southeast China

In order to assess the contamination of edible marine organisms in Quanzhou and Xinghua Bays,Fujian Province,China,concentrations of organochlorine pesticides(hexachlorocyclohexane isomers or HCHs and dichlorodiphenyltrichloroethane isomers/derivatives or DDTs) and heavy metals(Cu,Pb,Zn,As,Cr,Cd,Ni and Hg) in 13 species collected from different sites in the bays were analyzed by GC-ECD and ICP-MS.The concentration of the sum of DDTs exceeded that the sum of HCHs in the samples.Most of the organisms showed h...     

北京市西北城区取暖期环境大气中PM10的物理化学特征

根据监测资料探讨了北京市西北城区取暖期PM₁₀的逐日变化规律和日变化规律.分别使用X射线衍射仪(XRD)和扫描电镜(SEM)研究PM₁₀中的矿物成分及其微观形貌特征.结果表明夜间PM₁₀浓度普遍高于白天.XRD分析显示颗粒物粒度越细,其中所含的矿物种类越少.SEM研究得出,单个PM₁₀颗粒类型可初步分为有链状集合体、簇状集合体、圆球状、片状和不规则形状等5类.从数量上看,PM₁₀主要来自燃煤和汽车尾气.     

夏季长三角地区臭氧非线性响应曲面模型的建立及应用

2013年8月上旬,长三角地区发生了一次大范围高浓度臭氧污染事件.本研究基于WRF-CMAQ空气质量模型系统,结合长三角地区大气污染物排放清单,构建了臭氧与其前体物之间的非线性响应曲面模型(Response surface modeling,RSM).基于RSM探讨了长三角地区O_3化学的敏感性特征,分析了上海市O_3的来源并预测不同情景下O_3的变化,提出O_3污染的最优控制方案.研究结果表明,长三角地区夏季O3主控因素区域差别较大,上海环科院、杭州卧龙桥、南京玄武湖等城区点位属于VOC控制型;徐州铜山、合肥肥西、丽水青田等郊区属于NOx控制型.O_3的敏感性特征在不同浓度水平下也呈现较大差异,随着O_3浓度水平的升高,各地区NOx敏感性均有所增加.从区域来源来看,远距离传输对平日上海O_3贡献较大,占50%以上;而在O_3污染日,本地及区域贡献为72.1%,而远距离传输贡献下降至27.9%.快速预测了110组减排情景,表明在本地及区域前体物均减排70%的情况下,2013年8月上海O_3浓度能完全达标.     

Random forests for classification in ecology

Classification procedures are some of the most widely used statistical methods in ecology. Random forests (RF) is a new and powerful statistical classifier that is well established in other disciplines but is relatively unknown in ecology. Advantages of RF compared to other statistical classifiers include (1) very high classification accuracy; (2) a novel method of determining variable importance; (3) ability to model complex interactions among predictor variables; (4) flexibility to perform several types of statistical data analysis, including regression, classification, survival analysis, and unsupervised learning; and (5) an algorithm for imputing missing values. We compared the accuracies of RF and four other commonly used statistical classifiers using data on invasive plant species presence in Lava Beds National Monument, California, USA, rare lichen species presence in the Pacific Northwest, USA, and nest sites for cavity nesting birds in the Uinta Mountains, Utah, USA. We observed high classification accuracy in all applications as measured by cross-validation and, in the case of the lichen data, by independent test data, when comparing RF to other common classification methods. We also observed that the variables that RF identified as most important for classifying invasive plant species coincided with expectations based on the literature.