Investigating riparian margins for vegetation patterns and plant-environment relationships in northeast Scotland

Buffer strips alongside watercourses are a widely accepted method of reducing nutrient and sediment run-off from agricultural land thereby improving water quality. Little attention, however, has been paid to the ecological status of these areas despite the fact that riparian habitats in good condition can provide multiple benefits. We investigated vegetation patterns and plant-environment relationships within three categories of riparian margins in northeast Scotland. The margins were categorized as unbuffered, buffered, or reference (target), the latter representing the best sites available within the catchments. Vascular plant and soil data were collected from 41 sites along the tributaries of two rivers during 2008 and 2009. Ellenberg indicator values revealed trends of decreasing light availability ( < 0.05) and decreasing pH ( < 0.01) from unbuffered sites to buffered sites to reference sites. Multivariate analysis showed that soil parameters and channel morphology, together with canopy cover and bryophyte abundance, were discriminatory in separating species assemblages. The presence of a tree canopy layer appears to be the key instigator of change in soil conditions and corresponding plant species assemblages. An understanding of the underlying processes is important if vegetation characteristics are to be used effectively as indicators of riparian and water quality and to aid the restoration of riparian habitats.     

Using a Down-Scaled Bioclimate Envelope Model to Determine Long-Term Temporal Connectivity of Garry oak (<Emphasis Type="Italic">Quercus garryana</Emphasis>) Habitat in Western North America: Implications for Protected Area Planning

Under the Canadian Species at Risk Act (SARA), Garry oak (Quercus garryana) ecosystems are listed as “at-risk” and act as an umbrella for over one hundred species that are endangered to some degree. Understanding Garry oak responses to future climate scenarios at scales relevant to protected area managers is essential to effectively manage existing protected area networks and to guide the selection of temporally connected migration corridors, additional protected areas, and to maintain Garry oak populations over the next century. We present Garry oak distribution scenarios using two random forest models calibrated with down-scaled bioclimatic data for British Columbia, Washington, and Oregon based on 1961–1990 climate normals. The suitability models are calibrated using either both precipitation and temperature variables or using only temperature variables. We compare suitability predictions from four General Circulation Models (GCMs) and present CGCM2 model results under two emissions scenarios. For each GCM and emissions scenario we apply the two Garry oak suitability models and use the suitability models to determine the extent and temporal connectivity of climatically suitable Garry oak habitat within protected areas from 2010 to 2099. The suitability models indicate that while 164 km² of the total protected area network in the region (47,990 km²) contains recorded Garry oak presence, 1635 and 1680 km² of climatically suitable Garry oak habitat is currently under some form of protection. Of this suitable protected area, only between 6.6 and 7.3% will be “temporally connected” between 2010 and 2099 based on the CGCM2 model. These results highlight the need for public and private protected area organizations to work cooperatively in the development of corridors to maintain temporal connectivity in climatically suitable areas for the future of Garry oak ecosystems.     

Seasonal dynamics of harmful algae in outer Oslofjorden monitored by microarray, qPCR, and microscopy

Monitoring of marine microalgae is important to predict and manage harmful algal blooms. Microarray Detection of Toxic ALgae (MIDTAL) is an FP7-funded EU project aiming to establish a multi-species microarray as a tool to aid monitoring agencies. We tested the suitability of different prototype versions of the MIDTAL microarray for the monthly monitoring of a sampling station in outer Oslofjorden during a 1-year period. Microarray data from two different versions of the MIDTAL chip were compared to results from cell counts (several species) and quantitative real-time PCR (qPCR; only Pseudochattonella spp.). While results from generation 2.5 microarrays exhibited a high number of false positive signals, generation 3.3 microarray data generally correlated with microscopy and qPCR data, with three important limitations: (1) Pseudo-nitzschia cells were not reliably detected, possibly because cells were not sufficiently retained during filtration or lysed during the extraction, and because of low sensitivity of the probes; (2) in the case of samples with high concentrations of non-target species, the sensitivity of the arrays was decreased; (3) one occurrence of Alexandrium pseudogonyaulax was not detected due to a 1-bp mismatch with the genus probe represented on the microarray. In spite of these shortcomings our data demonstrate the overall progress made and the potential of the MIDTAL array. The case of Pseudochattonella — where two morphologically similar species impossible to separate by light microscopy were distinguished — in particular, underlines the added value of molecular methods such as microarrays in routine phytoplankton monitoring.     

Molecular probes and microarrays for the detection of toxic algae in the genera Dinophysis and Phalacroma (Dinophyta)

Dinophysis and Phalacroma species containing diarrheic shellfish toxins and pectenotoxins occur in coastal temperate waters all year round and prevent the harvesting of mussels during several months each year in regions in Europe, Chile, Japan, and New Zealand. Toxicity varies among morphologically similar species, and a precise identification is needed for early warning systems. Molecular techniques using ribosomal DNA sequences offer a means to identify and detect precisely the potentially toxic species. We designed molecular probes targeting the 18S rDNA at the family and genus levels for Dinophysis and Phalacroma and at the species level for Dinophysis acuminata, Dinophysis acuta, and Dinophysis norvegica, the most commonly occurring, potentially toxic species of these genera in Western European waters. Dot blot hybridizations with polymerase chain reaction (PCR)-amplified rDNA from 17 microalgae were used to demonstrate probe specificity. The probes were modified along with other published fluorescence in situ hybridization and PCR probes and tested for a microarray platform within the MIDTAL project (http://www.midtal.com). The microarray was applied to field samples from Norway and Spain and compared to microscopic cell counts. These probes may be useful for early warning systems and monitoring and can also be used in population dynamic studies to distinguish species and life cycle stages, such as cysts, and their distribution in time and space.     

Evaluation of genotoxicity and coumarin production in conventional and organic cultivation systems of Mikania glomerata Spreng

Abstract

Mikania glomerata Sprengel, popularly known as “guaco,” is used in Brazilian folk medicine for several inflammatory and allergic conditions. Besides, the popular use “guaco” is indicated by the Brazilian Ministry of Health as a safe and effective herbal medicine. The biological activity of M. glomerata extracts is due to the presence of the coumarins, a large family of phenolic substances found in plants and is made of fused benzene and α-pyrone rings. Considering that there are few data on the biological effects of the extracts of M. glomerata, mainly in genetic level, this work aims to evaluate, in vitro, the genotoxicity and coumarin production in M. glomerata in conventional and organic growing. The data showed that the organic culture system showed double the concentration of coumarin being significantly more productive than the conventional system. Besides, the results of comet assay suggest that extracts of M. glomerata cultivated in a conventional system was genotoxic, increased DNA damage levels while the organic extracts seem to have antigenotoxic effect possibly due to the concentration of coumarins. Additional biochemical investigations are necessary to elucidate the mechanisms of action of M. glomerata extracts, which were found to have a role in protection against DNA damage.     

In Situ Measurement of Hydrochloric Acid in Rocket Exhaust Clouds Using a Remotely Piloted Aircraft

Abstract

An instrumentation system employing an RPV (remotely piloted vehicle) platform was developed for temporally and spatially resolved air pollution measurements, and was used to measure the evolution of gas-phase HC1 in exhaust clouds from a solid rocket motor firing and fuel pit burns. A thermistor and a sensitive (ppmv-level), rapid-response (<0.1 sec) infrared absorption sensor for HC1 were mounted in a flow channel in the RPV, permitting concentration and temperature measurements to be made in the cloud on a several-meter scale. The RPV system was flown in a series of field tests at Thiokol Corporation’s Elkton, MD division to evaluate the HC1 content of the exhaust products of a new Mg-based fuel formulation. Measurements were made in the clouds from Al-based and Mg-based solid fuel pit burns and a Mg-fueled motor firing over periods of several minutes. Elevated temperatures and HC1 concentrations were found to be temporally correlated with video images of the particulate cloud. Cl originating from the ammonium perchlorate oxidizer appeared in the exhaust as HC1 in each of the tests. Both the macroscopic and local cloud parameters indicate that the Mg-based fuel may provide some reduction in HC1 concentration compared to the standard Al-based fuel.     

Effect of some preparates on soil microflora on the basis of soil bioassay

Abstract

Trials for control of soil‐borne plant pathogen fungi with biological and chemical fungicide preparates have been carried out in our Biological Control Laboratory for more than 10 years. During all these experiments soil bioassay was always carried out in order to observe the soil microflora. Here we mention one trial which confirms the general opinion that chemical treatments significantly change the soil microflora. The tested biological fungicide did not cause such changes.     

Mycorrhizal species differentially alter plant growth and response to herbivory

Plants simultaneously interact with multiple organisms which can both positively and negatively affect their growth. Herbivores can reduce plant growth through loss of plant biomass and photosynthetic area, while plant mutualists, such as mycorrhizal fungi, can increase plant growth through uptake of essential nutrients. This is the first study examining whether species-specific associations with mycorrhizal fungi alter plant tolerance to herbivory. We grew Plantago lanceolata plants with three species of mycorrhizal fungi previously shown to have differential impacts on plant growth and subjected them to herbivory by the specialist lepidopteran herbivore, Junonia coenia. Association with mycorrhizal fungus Glomus white provided the greatest growth benefit but did not alter plant response to herbivory. Alternatively, association with Archaeospora trappei provided less growth promotion but did lead to tolerance to herbivory in the form of an increased growth rate. Finally, an association with the fungus Scutellospora calospora led to neither plant growth promotion nor tolerance to herbivory. In fact, an association with S. calospora appeared to reduce plant tolerance to herbivory. An association with all three species of mycorrhizae resulted in a pattern of growth similar to that of plants grown only with Glomus white, suggesting that growth promotion by multiple mycorrhizal species is driven by the inclusion of a "super fungus," in this case, Glomus white. This work illustrates that plant response to herbivory depends upon the mycorrhizal fungal mutualist with which a plant is associated.     

Climate vs. soil factors in local adaptation of two common plant species

Evolutionary theory suggests that divergent natural selection in heterogeneous environments can result in locally adapted plant genotypes. To understand local adaptation it is important to study the ecological factors responsible for divergent selection. At a continental scale, variation in climate can be important while at a local scale soil properties could also play a role. We designed an experiment aimed to disentangle the role of climate and (abiotic and biotic) soil properties in local adaptation of two common plant species. A grass (Holcus lanatus) and a legume (Lotus corniculatus), as well as their local soils, were reciprocally transplanted between three sites across an Atlantic-Continental gradient in Europe and grown in common gardens in either their home soil or foreign soils. Growth and reproductive traits were measured over two growing seasons. In both species, we found significant environmental and genetic effects on most of the growth and reproductive traits and a significant interaction between the two environmental effects of soil and climate. The grass species showed significant home site advantage in most of the fitness components, which indicated adaptation to climate. We found no indication that the grass was adapted to local soil conditions. The legume showed a significant home soil advantage for number of fruits only and thus a weak indication of adaptation to soil and no adaptation to climate. Our results show that the importance of climate and soil factors as drivers of local adaptation is species-dependent. This could be related to differences in interactions between plant species and soil biota.