Preimplantation genetic diagnosis of the fragile X syndrome by use of linked polymorphic markers

Fragile X syndrome is the most common cause of familial mental retardation. The most common mutation is expansion of a triplet (CGG)_n repeat in the 5′ untranslated region of the FMR1 gene on Xq27.3. The expansion is refractory to PCR due to preferential amplification of the smaller allele in heterozygous cells and the high GC content of the repeat and surrounding sequences. Direct detection of the normal parental alleles in preimplantation embryos has been used for preimplantation genetic diagnosis (PGD) of this disorder. However, this approach is only suitable for approximately 63% of couples due to the heterozygosity of the repeat in the normal population. As an alternative we investigated the use of polymorphic markers flanking the mutation to track the normal and premutation carrying maternal chromosomes in preimplantation embryos. Using a panel of 11 polymorphisms, six (CA)_n repeats and five single nucleotide polymorphisms, diagnosis was developed for 90% of referred couples. Multiplex amplification of informative markers was tested in 300 single buccal cells from interested couples with efficiency and allele drop out (ADO) rates ranging from 69% to 96% and 6% to 18%, respectively. Use of this approach is accurate and applicable to a larger number of patients at risk of transmitting fragile X to their offspring. Copyright © 2001 John Wiley & Sons, Ltd.     

长江流域的昆虫病毒资源及其开发利用

在长江流域已发现约１３０种昆虫病毒，其中多数属杆状病毒科。昆虫病毒作为杀虫剂在本地区广泛应用，防治棉花、森林、茶树、蔬菜和牧草上的害虫，克服了化学农药的一些缺点，取得了良好的生态效益和经济效益。近年来还进行了杆状病毒表达载体的研究，该系统的研制已用于高水平表达具有生物活性的外源基因产物，获得医药产品，或者组建更有效的基因工程病毒杀虫剂。     

A comparison of different lysis buffers to assess allele dropout from single cells for preimplantation genetic diagnosis

Single cell polymerase chain reaction (PCR) for preimplantation genetic diagnosis (PGD) requires high efficiency and accuracy. Allele dropout (ADO), the random amplification failure of one of the two parental alleles, remains the most significant problem in PCR-based PGD testing since it can result in serious misdiagnosis for compound heterozygous or autosomal dominant conditions. A number of different strategies (including the use of lysis buffers to break down the cell and make the DNA accessible) have been employed to combat ADO with varying degrees of success, yet there is still no consensus among PGD centres over which lysis buffer should be used (ESHRE PGD Consortium, 1999 ). To address this issue, PCR amplification of three genes (CFTR, LAMA3 and PKP1) at different chromosomal loci was investigated. Single lymphocytes from individuals heterozygous for mutations within each of the three genes were collected and lysed in either alkaline lysis buffer (ALB) or proteinase K/SDS lysis buffer (PK). PCR amplification efficiencies were comparable between alkaline lysis and proteinase K lysis for PCR products spanning each of the three mutated loci (ΔF508 in CFTR 90% vs 88%; R650X in LAMA3 82% vs 78%; and Y71X in PKP1 91% vs 87%). While there was no appreciable difference between ADO rates between the two lysis buffers for the LAMA3 PCR product (25% vs 26%), there were significant differences in ADO rates between ALB and PK for the CFTR PCR product (0% vs 23%) and the PKP1 PCR product (8% vs 56%). Based on these results, we are currently using ALB in preference to PK/SDS buffer for the lysis of cells in clinical PGD. Copyright © 2001 John Wiley & Sons, Ltd.     

Fetal cardiac anomalies and genetic syndromes

Cardiac anomalies may occur in isolation or can be part of a genetic syndrome. In this article, we describe some of the genetic syndromes commonly associated with cardiac anomalies where there are other sonographic features that may aid accurate prenatal diagnosis. Copyright © 2004 John Wiley & Sons, Ltd.     

基于LOADEST和数字滤波的水源地基流氮素输出定量方法应用实例

地表直接径流和基流均是流域非点源氮/磷养分输出的重要水文途径.科学认识和定量模拟基流氮/磷养分输出对于准确解析水源地水体非点源污染来源至关重要.基于Load Estimator模型和数字滤波算法,建立了定量水源地基流氮素输出的方法体系.以浙江省珊溪水源地的玉泉溪流域为例,利用玉泉溪2010-01—2013-12期间逐月总氮(TN)水质监测数据和逐日流量数据,展示了该方法的计算过程.结果表明,本文建立的水源地基流氮素输出定量方法结果合理,模拟精度高,决定系数和纳什系数分别为0.83和0.80;玉泉溪流域2010—2013年TN负荷量为141.21～274.68 t·a~(-1),平均208.63 t·a~(-1),年基流TN负荷量为84.39～168.68 t·a~(-1),平均127.69 t·a~(-1);基流对玉泉溪年均TN负荷量贡献率高达60%以上,流域基流养分输出对地表水体的污染应引起足够重视.     

基于改进遗传算法的河流水污染源反演方法

针对河流水污染应急响应过程中污染源排放历史迟知、未知的问题,结合多种群遗传算法和自适应遗传算法,利用一维河流水质模型和水质监测数据,研究建立了基于改进遗传算法的河流水污染定量源反演方法,实现了对河流污染源排放历史的识别与重构.将该方法应用于美国特拉基河流的3个不同流量下的示踪剂实验中,对示踪剂排放历史进行定量源反演分析.结果表明：IGA算法对高、中、低不同流量下的3次示踪剂实验均可以很好的重构和识别示踪剂排放历史,对于实际河流水污染源反演分析的误差均在可接受范围内.IGA算法在河流水污染源反演分析中具有一定的可靠性和稳定性,可为河流水污染精准溯源与治理提供科学的技术支撑.     

中国化学品环境暴露评估领域的综合区划

大尺度空间（中国）化学品环境暴露多介质模型的建立需要先对空间做相应的区划.本文以ArcGIS软件为平台,通过有空间约束的聚类方法和水文分析方法相耦合,建立全国范围的综合分区.全国范围分为华南综合大区、华北综合大区、西北综合大区、华东综合大区、东北综合大区和西南综合大区6个综合大区.每个综合大区又分别包含了若干个综合小区,小区总数为38个.该研究为我国暴露评估的综合分区提供了一个方案,在多介质模型的建立中起着重要的作用.     

基于FY-4A卫星数据反演气溶胶光学厚度及分析应用

风云四号A星（FY-4A）是我国新一代静止气象卫星,多通道扫描成像辐射计（AGRI）是风云四号静止气象卫星的主要载荷之一.为探究FY4A数据用于气溶胶光学厚度（AOD）反演的可行性,基于FY-4A/AGRI数据,利用暗像元算法对2019年2月23~26日及10月27~30日京津冀地区AOD进行反演研究,并与AERONET地基观测AOD数据进行了对比分析.结果表明,基于FY-4A数据及构建响应函数库,通过暗像元方法能较好的反演出京津冀地区气溶胶空间分布;AOD主要的高值区体现在京津冀中南部地区并向周边郊区逐渐降低,在AOD值较大时此特征较为明显;将反演值与同期AERONET地基观测数据对比验证,相关系数达到0.869,均方根误差为0.221,表明AOD反演值与观测值吻合较好,FY-4A卫星数据反演AOD具有一定可行性.     

植物遗传资源保护与利用的市场化机制和国际制度

随着植物物种资源的不断减少和因生物技术迅猛发展对植物遗传资源需求的不断增加 ,植物遗传资源正逐步由公共物品转变为稀缺物品。坚持《生物多样性公约》所确立的遗传资源效益公平分享原则 ,完善现有国际多边体系 ,促进以“遗传编码功能”价值概念和遗传资源保护效应“内部化”与“补偿”方案为基础的植物遗传资源市场化保护与利用机制的形成 ,建立“植物遗传资源交易所”和“生物多样性合作社” ,将有助于提高世界各国尤其是发展中国家保护植物遗传资源的积极性 ,实现全球植物遗传资源的可持续利用