A simple method to harness DC (direct current) electrical energy generated by bacterial activity

We developed a new system for collecting electrons generated by bacterial activity to supply DC (direct current) electrical energy. This system used eight titanium sub-electrodes (surface area of each sub-electrode: 189 cm²) connected to one central main titanium electrode (surface area of electrode: 1571 cm²). The distance between each sub-electrode and the main electrode was 30 cm. In an initial experiment, we collected electrons during composting cattle excreta, which was mixed with a commercially available microbial compost activator/starter. We analysed the relationships between the composting temperature and electrical current and voltage. Electrons were effectively collected and used successfully to obtain DC electrical energy. Generation of a stable voltage of approximately 0.5 V was clearly observed. This voltage was not related to compost temperature; however, the generated electrical current increased and decreased with compost temperature. The method was then used in a second experiment to collect electrons generated by bacterial activity in an agricultural field (area: 48 m²). Electrons in the field were effectively collected, and we measured a stable voltage of approximately 1.1 V and a stable current of approximately 0.7 mA. The system has the advantages of being simple, easily maintained, inexpensive, and applicable to large-scale agricultural fields.     

Insights into effects of algae on decay and distribution of bacterial pathogens in recreational water: Implications for microbial risk management

The decay and distribution of bacterial pathogens in water is an important information for the health risk assessment to guide water safety management, and suspended algae might affect bacterial pathogens in water. This study established microcosms to investigate the effects of algae-related factors on the representative indicators and opportunistic pathogen species in water. We found that suspended algae increased the persistence of targeted species by 1-2 orders of magnitude of concentrations ...     

Effect of nitrobenzene on the performance and bacterial community in an expanded granular sludge bed reactor treating high-sulfate organic wastewater

Less than 50 mg/L nitrobenzene brought little effect on anaerobic sulfate reduction. Kinetics of sulfate reduction under different nitrobenzene contents was studied. Increased nitrobenzene contents greatly changed the bacterial community structure. Genus Desulfovibrio played the key role in anaerobic sulfate reduction process. Nitrobenzene (NB) is frequently found in wastewaters containing sulfate and may affect biological sulfate reduction process, but information is limited on the responses of sulfate reduction efficiency and microbial community to the increased NB contents. In this study, a laboratory-scale expanded granular sludge bed reactor was operated continuously to treat high-sulfate organic wastewater with increased NB contents. Results successfully demonstrated that the presence of more than 50 mg/L NB depressed sulfate reduction and such inhibition was partly reversible. Bath experiments showed that the maximum specific desulfuration activity (SDA) decreased from 135.80 mg SO₄^2?/gVSS/d to 30.78 mg SO₄^2?/gVSS/d when the NB contents increased from none to 400 mg/L. High-throughput sequencing showed that NB also greatly affected bacterial community structure. Bacteroidetes dominated in the bioreactor. The abundance of Proteobacteria increased with NB addition while Firmicutes presented an opposite trend. Proteobacteria gradually replaced Firmicutes for the dominance in response to the increase of influent NB concentrations. The genus Desulfovibrio was the dominant sulfate-reducing bacteria (SRB) with absence or presence of NB, but was inhibited under high content of NB. The results provided better understanding for the biological sulfate reduction under NB stress.     

Bacteriophages in water pollution control: Advantages and limitations

•Phages can be better indicators of enteric viruses than fecal indicator bacteria. •Multiple phages should be added to the microbial source tracking toolbox. •Engineered phage or phage cocktail can effectively target resistant bacteria. •In phage use, phage-mediated horizontal gene transfer cannot be ignored. •More schemes are needed to prevent phage concentration from decreasing. Wastewater is a breeding ground for many pathogens, which may pose a threat to human health through various water transmission pathways. Therefore, a simple and effective method is urgently required to monitor and treat wastewater. As bacterial viruses, bacteriophages (phages) are the most widely distributed and abundant organisms in the biosphere. Owing to their capacity to specifically infect bacterial hosts, they have recently been used as novel tools in water pollution control. The purpose of this review is to summarize and evaluate the roles of phages in monitoring pathogens, tracking pollution sources, treating pathogenic bacteria, infecting bloom-forming cyanobacteria, and controlling bulking sludge and biofilm pollution in wastewater treatment systems. We also discuss the limitations of phage usage in water pollution control, including phage-mediated horizontal gene transfer, the evolution of bacterial resistance, and phage concentration decrease. This review provides an integrated outlook on the use of phages in water pollution control.     

Feasibility of weeds-based compost-cultivated Agaricus bisporus北大核心CSCD

Making full use of local weed resources to produce Agaricus bisporus is of great importance in reducing production costs and protecting the environment. In this paper, three trial experiments were conducted on the basis of weed diversity investigation around the Miyun Reservoir and the adjustment of formulation and technology in the industrial production of A. bisporus. Compost samples from different phases of the composting process and at various cultivation stages were collected for the determination of their physical-chemical properties, lignocellulose content, lignocellulolytic enzyme activities, and bacterial communities enrichment by 16S rRNA gene sequencing. The yield of mushrooms in each different trial was also calculated. The results showed several types of reservoir weeds with high, thick and hard stems. The saturated moisture of weeds was 76.78% after baling. The water content, carbon content, and C/N ratio of the samples decreased gradually during composting, but had little change during cultivation. The nitrogen content decreased at the end of phase I and increased at the end of phase II. During composting, the loss rates of hemicellulose and cellulose were both between 40% and 60%, and the loss rate of lignin was between 20% and 30%. During cultivation, instead, the loss rate of lignin was between 16% and 21%. The changes in the content of cellulose and hemicellulose of compost were consistent with that of the activity of the related degradation enzymes. A total of 432 595 valid sequences were obtained by Illumina sequencing for the samples derived from the three composting trials, and the average length of the sequences was 441 bp. Taxonomic analysis showed that the dominant bacteria were Prevotella (phylum Bacteroidetes), Bacillus (phylum Firmicutes), Thermus, Truepera, and Caldicoprobacter (phylum Deinococcus-Thermus), Thermopolyspora (phylum Actinobacteria), and Pseudoxanthomonas (phylum Proteobacteria). The yield of the three trials was in the range of 17.1-19.7 kg/m2. It is thus feasible to use reservoir weeds compost instead of wheat straw compost for the cultivation of A. bisporus. © 2018 Science Press. All rights reserved.     

Bacterial community structure in waterlogged bamboo slips excavated from the Laoguanshan Han Dynasty Tomb of Chengdu北大核心CSCD

To investigate the bacterial community structure features of soak solutions used to preserve bamboo slips that were excavated from Han dynasty tomb located in Laoguanshan of Chengdu and to reveal the diversity of bacteria in these soak solutions, PCR-DGGE was employed. Subsequently, the major DGGE bands were excised and sequenced to analyze the phylogeny of bacteria. The richness (S), Shannon-Wiener index (H), and Simpson index (D) of deionized water (0#) without the soaked bamboo slips were higher than those of the other samples. Among the bamboo slip soak solution samples, there were significant differences in these indicators; the bacterial genetic diversity of sample 121# was the highest and that of sample 1# was the lowest. Principal Component Analysis (PCA) showed that there were comparatively large differences among the samples, and the similarity between sample 1# and others was the lowest. Based on the sequence analysis, the major community of bacteria in soak solution were belonged to Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Firmicutes, Bacteroidetes, and Actinobacteria, including Cupriavidus, Aquabacterium, Comamonas, Albidiferax, Hyphomicrobiaceae, Azospirillum, Nevskia, Streptococcus, Staphylococcus, Sediminibacterium, and Propionibacterium, among which Cupriavidus of the β-Proteobacteria class was detected in all samples. The bacterial community structure of the soak solutions that were collected from different bamboo slips was quite complex and significantly different. The analysis of the main bacterial community revealed the potential bacteria species that may trigger the damage in bamboo slips; the result provided a reference to prevent waterlogged bamboo slips from microbial diseases in the future. © 2018 Science Press. All rights reserved.     

Tank-dependence of the functionality and network differentiation of activated sludge community in a full-scale anaerobic/anoxic/aerobic municipal sewage treatment plant

● Environmental parameters affected functional bacteria and network associations. ● The structure and interactions of AS networks changed greatly within tanks. ● Anoxic co-occurrence network was more unstable and easily influenced. ● Composition of functional bacteria had a seasonal succession pattern. ● Tetrasphaera was the major PAO in spring and winter leading a better P removal. Understanding the structures and dynamics of bacterial communities in activated sludge (AS) in full-scale wastewater treatment plants (WWTPs) is of both engineering and ecological significance. Previous investigations have mainly focused on the AS communities of WWTP aeration tanks, and the differences and interactions between the communities in anaerobic and anoxic tanks of the AS system remain poorly understood. Here, we investigated the structures of bacterial communities and their inter-connections in three tanks (anaerobic, anoxic, and aerobic) and influent from a full-scale WWTP with conventional anaerobic/anoxic/aerobic (A/A/O) process over a year to explore their functionality and network differentiation. High-throughput sequencing showed that community compositions did not differ appreciably between the different tanks, likely due to the continuous sludge community interchange between tanks. However, network analysis showed significant differences in inter-species relationships, OTU topological roles, and keystone populations in the different AS communities. Moreover, the anoxic network is expected to be more unstable and easily affected by environmental disturbance. Tank-associated environmental factors, including dissolved oxygen, pH, and nutrients, were found to affect the relative abundance of functional genera (i.e., AOB, NOB, PAOs, and denitrifiers), suggesting that these groups were more susceptible to environmental variables than other bacteria. Therefore, this work could assist in improving our understanding of tank-associated microbial ecology, particularly the response of functional bacteria to seasonal variations in WWTPs employing A/A/O process.     

Effect of catchment land use and soil type on the concentration,quality, and bacterial degradation of riverine dissolved organic matter

We studied the effects of catchment characteristics (soil type and land use) on the concentration and quality of dissolved organic matter (DOM) in river water and on the bacterial degradation of terrestrial DOM. The share of organic soil was the strongest predictor of high concentrations of dissolved organic carbon, nitrogen, and phosphorus (DOC, DON, and DOP, respectively), and was linked to DOM quality. Soil type was more important than land use in determining the concentration and quality of riverine DOM. On average, 5–9 % of the DOC and 45 % of the DON were degraded by the bacterial communities within 2–3 months. Simultaneously, the proportion of humic-like compounds in the DOM pool increased. Bioavailable DON accounted for approximately one-third of the total bioavailable dissolved nitrogen, and thus, terrestrial DON can markedly contribute to the coastal plankton dynamics and support the heterotrophic food web.     

Remediation of a chlorinated aromatic hydrocarbon in water by photoelectrocatalysis

Photoelectrocatalysis driven by visible light offers a new and potentially powerful technology for the remediation of water contaminated by organo-xenobiotics. In this study, the performance of a visible light-driven photoelectrocatalytic (PEC) batch reactor, applying a tungsten trioxide (WO₃) photoelectrode, to degrade the model pollutant 2,4-dichlorophenol (2,4-DCP) was monitored both by toxicological assessment (biosensing) and chemical analysis. The bacterial biosensor used to assess the presence of toxicity of the parent molecule and its breakdown products was a multicopy plasmid lux-marked E. coli HB101 pUCD607. The bacterial biosensor traced the removal of 2,4-DCP, and in some case, its toxicity response suggests the identification of transient toxic intermediates. The loss of the parent molecule, 2,4-DCP determined by HPLC, corresponded to the recorded photocurrents. Photoelectrocatalysis offers considerable potential for the remediation of chlorinated hydrocarbons, and that the biosensor based toxicity results identified likely compatibility of this technology with conventional, biological wastewater treatment.     

Restoring biochemical activity and bacterial diversity in a trichloroethylene-contaminated soil: the reclamation effect of vermicomposted olive wastes

Background, aim, and scope  In this work, the potential for using olive-mill solid waste as an organic amendment for biochemical and biological restoration of a trichloroethylene-contaminated soil, which has previously been stabilized through vermicomposting processes, has been explored. Materials and methods  Trichloroethylene-contaminated water was pumped into soil columns with a layer of vermicompost at 10-cm depth (biobarrier system). The impacts of the trichloroethylene on the microbial community were evaluated by determining: (1) the overall microbial activity (estimated as dehydrogenase activity) and enzyme activities related to the main nutrient cycles (β-glucosidase, o-diphenoloxidase, phosphatase, urease, and arylsulphatase activities). In addition, isoelectric focusing of the soil extracellular humic-β-glucosidase complexes was performed to study the enzymatically active humic matter related to the soil carbon cycle. (2) The soil bacterial diversity and the molecular mechanisms for the bacterial resistance to organic solvents were also determined. For this, polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) was used to detect changes in bacterial community structure and PCR-single-strand conformational polymorphism (SSCP) was developed and optimised for detection and discrimination of the resistance-nodulation-division (RND) genes amplified from the contaminated soils. Results  Vermicompost reduced, with respect to the unamended soil, about 30% of the trichloroethylene leaching during the first month of the experiment. Trichloroethylene had a marked negative effect on soil dehydrogenase, β-glucosidase, urease, phosphatase, and arylsulphatase activities. Nevertheless, the vermicompost tended to avoid this toxic effect. Vermicompost also displays stable humic-β-glucosidase complexes that increased the extracellular activity related to C-cycle in the contaminated soils. The isoelectric focusing technique showed a more biochemically active humic matter in the soil sampled under the vermicompost. The behaviour of the three main phyla of bacteria isolated from the DGGE bands was quite different. Bands corresponding to Actinobacteria disappeared, whereas those affiliated with Proteobacteria remained after the trichloroethylene contamination. The disappeared Actinobacteria became visible in the soil amended with the vermicompost. Bands corresponding to Bacteriodetes appeared only in columns of contaminated soils. In this study, six types of RND proteins were detected by PCR-SSCP in the natural soil, three in the trichloroethylene-contaminated soil and 7/5 in trichloroethylene-contaminated soil above/below the vermicompost in the biobarrier columns. Trichloroethylene tended to reduce or eliminate all the clones detected in the uncontaminated soil, whereas new efflux pumps appeared in the biobarrier columns. Discussion  Although enzymes incorporated into the humic substances of vermicomposted olive wastes are quite stable, trichloroethylene also inhibited the background levels of the soil extracellular β-glucosidase activity in the amended soils. The decrease was less severe in the biobarrier system, but in any case, no relation was found between the levels of trichloroethylene in soil and extracellular β-glucosidase activity, or between the latter and the quantity of humic carbon in soils. The isoelectric focusing technique was carried out in the humic fraction to determine whether the loss of activity occurred in overall extracellular β-glucosidase or in that linked to stable humic substances (humic–enzyme complexes). The contaminated soils showed the lower enzyme activities, whereas contaminated and amended soils presented greater quantity of focalised (and therefore stable) humic carbon and spectra heterogeneity: very different bands with higher enzyme activities. No clear relationship between trichloroethylene concentration in soil and diversity of the bacterial population was noted. Similar patterns could be found when the community structures of bacteria and microbial activity were considered. Since the use of the dehydrogenase assay has been recognised as a useful indicator of the overall measure of the intensity of microbial metabolism, these results could be attributed to PCR-DGGE methodology, since the method reveals the presence of dominant populations regardless of their metabolic state. Trichloroethylene maintained or even increased the number of clones with the DNA encoding for RND proteins, except for the contaminated soil located above the vermicompost. However, the main effect of trichloroethylene was to modify the structure of the community in contaminated soils, considering the type of efflux pumps encoded by the DNA extracted from soil bacteria. Conclusions  Trichloroethylene inhibited specific functions in soil and had a clear influence on the structure of the autochthonous bacterial community. The organic matter released by the vermicomposted olive waste tended to avoid the toxic effect of the contaminant. Trichloroethylene also inhibited the background levels of the soil extracellular β-glucosidase activity, even when vermicompost was present. In this case, the effect of the vermicompost was to provide and/or to stimulate the humic-β-glucosidase complexes located in the soil humic fraction >10⁴, increasing the resistance of the enzyme to the inhibition. The bacterial community from the soil presented significantly different mechanisms to resistance to solvents (RND proteins) under trichloroethylene conditions. The effect of the vermicompost was to induce these mechanisms in the autochthonous bacterial community and/or incorporated new bacterial species, able to grow in a trichloroethylene-contaminated ambient. Coupled biochemical and molecular methodologies are therefore helpful approaches in assessing the effect of an organic amendment on the biochemical and biological restoration of a trichloroethylene-contaminated soil. Recommendations and perspectives  Since the main biochemical and biological effects of the organic amendment on the contaminated soil seem to be the incorporation of biochemically active humic matter, as well as new bacterial species able to grow in a trichloroethylene-contaminated ambient, isoelectric focusing and PCR-SSCP methodologies should be considered as parts of an integrated approach to determine the success of a restoration scheme.