宁武亚高山湖泊细菌群落的时空格局及驱动机制

受人类活动和气候变化的影响,亚高山湖泊生态系统日趋退化,导致微生物群落生物多样性和结构改变.本研究以宁武亚高山湖泊公海(GH)水体细菌群落为研究对象,通过Q-PCR和DGGE技术分析了不同季节和不同深度的水体中细菌群落多样性分布格局,探究细菌群落的时空动态及其多样性维持机制.结果表明,温度(T)、酸碱度(p H)、溶解氧(DO)、电导率(EC)、盐度(SAL)和铵态氮(NH4+)在每个月的不同采样深度间均有显著差异.细菌群落丰度具有明显的时空动态,其中8月的丰度最高,11月最低;在水体中层(2、4和6 m)的丰度较高,表层和底层(0 m和8 m)相对较低.细菌群落α多样性指数在各月份和不同深度间均有显著性差异,从4～12月整体上呈现先减少后增加的趋势.相似性分析(PERMANOVA)结果表明,不同深度之间细菌群落的空间分布格局明显不同(P 0. 001).冗余分析(RDA)和方差分解(VPA)结果表明在不同深度下,细菌群落多样性格局是环境选择和扩散限制共同作用的结果,但是环境选择的相对作用更强,其中水体无机氮(NO3-、NO2-和NH4+)浓度是主要的影响因子.总之,宁武亚高山湖泊公海中细菌群落多样性有明显的时空分布格局,环境选择作为主要因素驱动了细菌群落的多样性格局.     

水库水体热分层的水质及细菌群落分布特征

作为重要的城市饮用水源地,水库是人工筑坝形成的特殊类型的水体,其水质直接影响居民的饮用水安全.为揭示北京市饮用水源地密云水库的秋季分层特征和细菌群落的垂直变化,于水体稳定分层期(秋季)在水库进行采样,应用16S rDNA末端限制性片段长度多态性(T-RFLP)和定量PCR等方法研究了密云水库水体细菌群落的垂直分布特征,并利用聚类分析、多元统计分析揭示细菌群落与环境因子之间的响应关系.结果表明:(1)密云水库水体温跃层位于水深20～30 m处,水温范围在15～19℃,聚类分析将7个采样水层划分为好氧区(上层)和缺氧区(下层)两类,温度、DO、pH在15 m以下逐渐降低,电导率、氨氮、硝态氮、亚硝态氮及总氮在15 m后发生显著变化,水体水质表现出明显的垂直分布特征;(2)RDA分析结果显示,上下水层的溶解氧、pH、电导率、氨氮、硝态氮和亚硝态氮存在较为明显的垂向变化,是影响密云水库细菌群落垂直分布的主要环境因子;(3)总细菌的数量随水深变化的波动较为明显,其中好氧区细菌的Shannon-Wiener指数和T-RFs片段数明显高于缺氧区,说明秋季密云水库水体中细菌群落分布存在显著的分层现象.本研究探究了水体热分层对水库水质及细菌群落的影响,可为预测水质变化和水库管理提供科学依据.     

磺胺嘧啶对鱼菜共生系统氮元素转化的影响

本文研究了典型抗生素磺胺嘧啶对实验室规模鲤鱼-小白菜共生系统生产性能和氮元素转化的影响.结果表明,磺胺嘧啶使系统鲤鱼体重增量提高17%,但小白菜生产性能大幅下降,使得系统氮素利用率由43.66%降至21.20%,N₂O转化率由1.02%上升至1.98%.磺胺嘧啶在投加初期对系统的硝化过程表现出短期抑制效应,经过32d的适应期后,实验组氨氮浓度下降至和对照组相近水平,系统运行后期实验组氨氧化细菌丰度相较对照组提高51.43%.鱼体内残余的磺胺嘧啶为35.23μg/kg,符合国家标准,但水体中磺胺类药物抗性基因sul1、sul2及intI1的拷贝数分别提升至7.23倍、2.74倍和4.12倍.从生产性能及环境友好性考虑,鱼菜共生系统在设计及运行中应减少或避免抗生素的使用,并采取合理的替代措施规避其风险.     

氯和紫外消毒过程中胞外抗性基因的产生特征

考察了城市污水氯和紫外消毒过程中不同物理形态的胞外抗性基因的产生行为与及微生物群落的关联特征.结果表明,氯消毒尽管使胞内抗性基因丰度下降,但使结合型胞外抗性基因丰度明显上升（0.7±0.1）log,而游离型胞外抗性基因丰度下降（0.2±0.1）log.紫外消毒也使胞内抗性基因下降,但使游离型胞外抗性基因显著上升（0.4±0.2）log,而结合型胞外抗性基因丰度下降（0.3±0.1）log.氯消毒后,结合型胞外DNA（a-eDNA）中变形菌门丰度下降而其他菌门的丰度上升,细菌多样性指数由4.2上升到4.7;而游离型胞外DNA（f-eDNA）中变形菌门上升了6.6%,多样性指数则从3.5降低到2.8.紫外消毒后,a-eDNA中变形菌门丰度下降了36.6%,多样性则上升到4.8,而f-eDNA中细菌丰度变化较小.分子生态网络分析揭示了抗性基因与细菌间广泛的寄存关系,tetA、tetX、sulI和sulII分别与17、15、15和5种菌属间存在共现性,表明抗性基因潜在宿主的变化是导致消毒后胞外抗性基因产生的关键原因.本研究表明氯和紫外消毒不能消除抗性基因风险,反而通过导致不同胞外抗性基因的大量产生,使风险的形式发生变化.     

重稀土元素钇对短程反硝化工艺的影响

研究重稀土元素钇（Y（III））对短程反硝化工艺的短期和长期影响.结果表明,1~50mg/L的Y（III）对亚硝酸盐的积累量无明显影响,60~100mg/L的Y（III）会影响硝酸盐的还原和亚硝酸盐的积累.1~10mg/L的Y（III）对细菌活性呈现促进作用,20~100mg/L的Y（III）对细菌活性呈现抑制作用.胞外吸附的Y（III）是抑制细菌活性的主要因子,线性拟合的相关性系数R²为0.957,半抑制浓度IC_50（吸附）为1.079mg/L（以湿重计）,对应水中Y（III）浓度为54.35mg/L.SEM显示,添加Y（III）会使细菌产生更多的胞外聚合物（EPS）将细菌包裹以抵抗Y（III）的毒性,EDS显示被包裹的细菌表面碳、氮元素含量大幅度降低,EPS影响了底物的传质.130d的长期实验表明,5mg/L的Y（III）会使反应器的反硝化性能逐渐消失,停止添加稀土后,反应器的亚硝酸盐积累功能也不能恢复.     

Effects of bio-organic fertilizers on pineapple heart rot and bacterial community structure北大核心CSCD

Heart rot is a common soil-borne disease in the pineapple industry, but the situation can be alleviated by the application of bio-fertilizers with beneficial microbiomes. Clarifying the controlling mechanism of bio-organic fertilizer on the high incidence of heart rot is critical in monocultural pineapple cropping patterns. In our study, the soil of continuous cropping pineapple orchards was collected. Three types of carriers (rapeseed cake, peat soil, and coconut bran), biocontrol strains (Bacillus subtilis HL2 and Streptomyces strain HL3), and organic fertilizer (YJ) were composted into different bio-fertilizers (KC, KN, KY, LC, LN, and LY), which were used in pot experiments. The controlling effect of the bio-fertilizer was determined based on the response of pineapple heart rot and bacterial communities to different fertilizing methods. Our results revealed that the incidence of heart rot in bio-fertilizer KC was the lowest, which decreased by 20% and 13.3%, respectively, compared to HF (chemical fertilizer, 16-16-16) and YJ (organic fertilizer). The richness and diversity of soil bacterial communities in all biofertilized treatments (KC, KN, KY, LC, LN, and LY) were significantly higher than those in HF. However, the α-diversity indices of the bio-fertilizers (KC, KN, and KY) were higher than those of LC, LN, and LY, and the bacterial community composition was significantly different. The bacteria GP4, GP6, Bacillus, and Azohydromonas were enriched in KC, KN, and KY, while the relative abundance of Streptomyces increased significantly in LC, LN, and LY. Furthermore, Spearman correlation analysis showed that the relative abundance of these bacterial groups was significantly negatively correlated with the incidence of pineapple heart rot. In summary, the application of bio-organic fertilizers can decrease the incidence of pineapple heart rot by altering the soil bacterial community structure and stimulating beneficial soil microorganisms, which is important for reconstructing the ecological balance in continuous pineapple orchards. © 2022 Authors. All rights reserved.     

Quantity and activity of ammonia-oxidizing archaea and bacteria and their contribution to ammonia oxidation in farmland soil of Qinghai-Tibet Plateau北大核心CSCD

Ammonia oxidation, the first and rate-limiting step of nitrification, is mainly performed by ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB). However, the activities of AOA and AOB in soil and their relative contribution to ammonia oxidation are unclear, and whether there is a significant correlation between the quantity of AOA and AOB and the ammonia oxidation rate is also controversial. In this study, quantitative PCR combined with acetylene (C2H2) and 1-octyne inhibition methods were used to determine the quantity and activity of AOA and AOB in wheat, highland barley, and oilseed rape soils in Nyingchi, Lhatse, Sangzhuzi, and Sangri counties on the Qinghai-Tibet Plateau. The results showed that the quantity of AOB ((2.34 ± 0.84) ×105 - (2.65 ± 1.07) ×106 copies g-1 dry soil) was significantly higher than that of AOA ((0.20 ± 0.10) ×104 - (4.02 ± 0.39) ×104 copies g-1 dry soil) in all the soil samples. Soil pH was the key factor affecting the quantity of AOB, and the total phosphorus and ammonium nitrogen in soil were the key factors affecting the quantity of AOA. The rates of ammonia oxidation in the farmland soils of Lhatse (2.42 ± 0.73 mg kg-1 d-1) and Sangzhuzi (3.24 ± 1.15 mg kg-1 d-1) were significantly higher than those in the soils of Nyingchi (1.17 ± 0.43 mg kg-1 d-1) and Sangri counties (0.88 ± 0.57 mg kg-1 d-1). The rates of ammonia oxidation in the farmland soils of Lhatse and Sangzhuzi were dominated by AOB, while those in the farmland soils of Nyingchi and Sangri counties were dominated by AOA. For crops, the ammonia oxidation rates of wheat and oilseed rape soils in all four regions were significantly higher than those of highland barley soil, whereas the activity of AOA and AOB was not influenced by crops. The ratio of nitrogen to phosphorus was the key factor influencing AOA activity, whereas soil pH and total carbon were the main factors influencing AOB activity. Additionally, the quantities of AOA and AOB were not significantly correlated with the total ammonia oxidation rates and AOA and AOB activity. Overall, our study suggests that both AOA and AOB play important roles in ammonia oxidation in farmland soils of the Qinghai-Tibet Plateau. Moreover, it is unreliable to predict the activity of AOA and AOB and their relative contribution to ammonia oxidation directly based on their number of amoA genes, and the activity of AOA and AOB should be directly and accurately measured. These results are important for understanding ammonia nitrogen removal processes, slowing nitrate loss, and reducing the emission of the greenhouse gas nitrous oxide in the farmland ecosystem of the Qinghai-Tibet Plateau. © 2022 Science Press. All rights reserved.     

白银矿区土壤重金属及可培养细菌重金属耐受性研究

对白银矿区土壤重金属进行分析研究,分离、筛选和鉴定了受污染土壤中的可培养细菌,并考察其对土壤中重金属胁迫的耐受性。结果表明：白银矿区王岘镇尾渣堆和东大沟河沟土壤重金属污染Pb＞Zn＞Cu;从污染最严重的土壤中分离、筛选出砖红色微杆菌（Microbacterium testaceum）、特基拉芽孢杆菌（Bacillus tequilensis）和解单端孢菌素微杆菌（Microbacterium trichothecenolyticum）3种细菌,其中菌株M1（Microbacterium testaceum）对Pb、Zn、Cu、Cd的胁迫具有明显的耐受性。     

牛粪好氧堆肥发酵微生物群落结构演替与环境因子和腐熟度的相关性

为了解好氧堆肥发酵过程中微生物群落结构变化规律和腐熟度生物学指标研究,以 自然发酵牛粪为研究材料,利用高通量测序技术分析细菌群落结构在发酵不同阶段、层次上的动态变化与环境因子和腐熟度的相互关系.结果显示:堆体上层温度、碳氮比和种子发芽指数指标优于下层;整个堆肥发酵过程中,细菌丰度和多样性指数呈先升高后降低的趋势;在门水...     

溶藻细菌DC-L14的分离、鉴定与溶藻特性

从滇池蓝藻水华集聚区分离获得一株溶藻细菌DC-L14,经16S rDNA序列分析鉴定为Lysinibacillus fusiformis;小白鼠毒性试验初步显示该菌株未产生小白鼠中毒毒素;该菌能使铜锈微囊藻905聚集成团,沉于瓶底,最终黄化;该菌作用4 d,使惠氏微囊藻107、绿色微囊藻102、水华束丝藻和水华鱼腥藻的叶绿素a下降率最高为70.1%.最低为65.5%,平均为67.2%;当细菌处于稳定生长期时溶藻效果最强,共培养4 d能使铜锈微囊藻905的叶绿素a含量下降82.1%;离心沉降后检测,发现菌体本身无溶藻效果,而无菌上清液与原菌液溶藻效果相同,高温处理后的菌液溶藻能力增强,推测该细菌是通过分泌溶藻物质溶藻,该物质可能为非蛋白质类,高温可能有利于溶藻物质的释放.图4表1参25