Toxic interaction mechanism of two fluoroquinolones with serum albumin by spectroscopic and computational methods

To evaluate the toxicity of two fluoroquinolones (FQs), ciprofloxacin (CPFX), and enrofloxacin (ENFX), at the protein level, their binding modes with bovine serum albumin (BSA) were characterized by multiple spectroscopic and molecular docking methods under simulated physiological conditions. On the basis of fluorescence spectra, we concluded that both FQs greatly quenched the fluorescence intensity of BSA, which was attributed to the formation of a moderately strong complex mainly through electrostatic interactions. Besides, CPFX posed more of an affinity threat than ENFX. The molecular docking methods further illustrated that both CPFX and ENFX could bind into the subdomain IIIA of BSA and interact with Arg 508 and Lys 437, the positively charged residues in protein. Furthermore, as shown by the synchronous fluorescence, UV-Visible absorption and circular dichroism data, both CPFX and ENFX could lead to the conformational and microenvironmental changes of BSA, which may affect its physiological function.     

Distribution and spectral characteristics of chromophoric dissolved organic matter in a coastal bay in northern China

The absorption spectra of chromophoric dissolved organic matter(CDOM),along with general physical,chemical and biological variables,were determined in the Bohai Bay,China,in the springs of 2011 and 2012. The absorption coefficient of CDOM at 350 nm(a350) in surface water ranged from 1.00 to 1.83 m-1(mean: 1.35 m-1) in May 2011 and from 0.78 to 1.92 m-1(mean:1.19 m-1) in April 2012. Little surface-bottom difference was observed due to strong vertical mixing. The a350 was weakly anti-correlated to salinity but positively correlated to chlorophyll a(Chl-a) concentration. A shoulder over 260–290 nm,suggestive of biogenic molecules,superimposed the overall pattern of exponentially decreasing CDOM absorption with wavelength. The wavelength distribution of the absorption spectral slope manifested a pronounced peak at ca. 300 nm characteristic of algal-derived CDOM. All a250/a365 ratios exceeded 6,corresponding to CDOM molecular weights(Mw) of less than 1 kDa. Spectroscopically,CDOM in the Bohai Bay differed substantively from that in the Haihe River,the bay's dominant source of land runoff; photobleaching of the riverine CDOM enlarged the difference.Results point to marine biological production being the principal source of CDOM in the Bohai Bay during the sampling seasons. Relatively low runoff,fast dilution,and selective photodegradation are postulated to be among the overarching elements responsible for the lack of terrigenous CDOM signature in the bay water.     

抗锶放线菌的分子鉴定及对Sr~(2+)的吸附效果和初步吸附机理分析

从大亚湾核电站附近水体中分离筛选出一株抗锶放线菌(编号YF-64),研究了该菌株在不同环境参数条件下对锶的吸附效果和初步机理,通过形态和16S rDNA序列相结合的方法对菌株进行了分类鉴定,采用红外光谱(FT-IR)分析技术对菌株吸附前后进行表征,探讨其吸附机制。结果表明,抗锶菌株隶属于天蓝黄链霉菌(基因序列登录号:JF901702),菌株对Sr~(2+)具有较强的吸附效果,根据数据显示,当接触时间为50 min,pH值为6,Sr~(2+)初始浓度为50 mg/L,摇床转速为120 r/min时,该菌株的吸附效果达到最佳为44.29 mg/g;FT-IR结果显示,JF901702菌株对Sr~(2+)的吸附主要是由细胞壁上的羟基,次甲基,羰基起主要吸附作用。由此可知,JF901702菌株可作为经济、高效、环境友好的生物吸附材料进行废水重金属处理。     

Effects of redox potential on soil cadmium solubility: Insight into microbial community

Understanding the role of microbes in the solubility of cadmium (Cd) is of fundamental importance for remediation of Cd toxicity. The present study aimed to identify the microbes that involved in regulating Cd solubility and to reveal possible mechanisms. Therefore, microbial communities were investigated through high-throughput sequencing approach, the molecular ecological network was constructed and metagenomes were predicted. Our results indicated that redox conditions affected both the solubility of soil Cd and the microbial communities. Anaerobic microbes, such as Anaerolineaceae, did not only play important roles in shaping the microbial community in soils, but might also be involved in regulating the Cd solubility. Two possible mechanisms that how Anaerolineaceae involved in Cd solubility are (1) Anaerolineaceae are important organic matter degraders under anoxic conditions and (2) Anaerolineaceae can co-exist with methane metabolism microbes, while methane metabolism promotes the precipitation of soluble Cd. Thus, application of Anaerolineaceae in bioremediation of soil Cadmium contamination is a potential approach. The study provided a novel insight into the role of microbial community in the regulation of Cd solubility under different redox conditions, and suggested a potential approach for the remediation of soil Cd contamination.     

多溴二苯醚类化合物干扰人雌激素受体alpha活性机理的理论研究

基于分子对接方法探讨了多溴二苯醚(PBDEs)类化合物与人雌激素受体α亚型间的分子作用机理.对多溴二苯醚类化合物是否具有拟雌激素功能的研究得出:可通过对接打分值和化合物结构特征来推测PBDEs母体化合物是否具有拟雌激素活性;对HO-PBDEs,与氨基酸残基GLU53和/或ARG394形成氢键可能是影响其拟雌激素活性的重要因素;对MeO-PBDEs,疏水MeO-位于结合腔的疏水中部有利于拟雌激素活性.从结构及构象分析得出,邻位疏水基(Br-、MeO-)有利于PBDEs类化合物的拟雌激素活性.同时对多溴二苯醚类化合物是否具有抗雌激素功能的结合特征研究发现,表现出抗雌激素活性的部分PBDEs类化合物伸进通常被雌激素受体拮抗剂雷洛昔芬和4-羟基它莫西芬的烷基胺侧链占据的通道,而大多数未表现出抗雌激素活性的PBDEs类化合物的结合模式类似雌激素受体激动剂17β-雌二醇,位于结合腔,没有伸进通道.本研究从化合物结构及化合物在受体内结合的构象特征上解释化合物活性不同的原因,以期能够利用构象分析得到的结果进行筛选.     

The relation between chemical structure and mutagenic activity of some polycyclic aromatic sulfur heterocycles (s‐pah)

Results of Hückel Molecular Orbital (HMO) calculations strongly suggest identical metabolic activation routes for the mutagen benzo[2,3]phenanthro[4,5‐bcd]thiophene and its homocyclic parent, benzo[a]pyrene.     

Insights on the solubilization products after combined alkaline and ultrasonic pre-treatment of sewage sludge

This work provides insights on the solubilization products after a simultaneous combination of alkaline and ultrasonic (ALK + ULS) pre-treatment of sewage sludge. Soluble chemical oxygen demand (SCOD) increased from 1200 to 11,000 mg/L after such treatment. Organics with molecular weight around 5.6 kDa were solubilized because of the synergistic effect of ultrasound and alkali. Organics with molecular weight larger than 300 kDa increased from 7.8% to 60%, 16% and 42.3% after ULS, ALK and ALK + ULS treatment, respectively. Excitation emission matrix fluorescence spectroscopy analysis identified soluble microbial product-like and humic acid-like matters as the main solubilization products. Sludge anaerobic biodegradability was significantly enhanced with the simultaneous application of ALK + ULS pre-treatment. ALK + ULS pre-treatment resulted in 37.8% biodegradability increase compared to the untreated sludge. This value was higher compared to the biodegradability increase induced by individual ALK pre-treatment (5.7%) or individual ULS pre-treatment (20.7%) under the same conditions applied.     

Molecular diversity of arbuscular mycorrhizal fungi at a large-scale antimony mining area in southern China

Arbuscular mycorrhizal fungi (AMF) have great potential for assisting heavy metal hyperaccumulators in the remediation of contaminated soils. However, little information is available about the community composition of AMF under natural conditions in soils contaminated by antimony (Sb). The objective of this study was to investigate the characteristics of AMF molecular diversity, and to explore the effects of Sb content and soil properties on the AMF community structure in an Sb mining area. Four Sb mine spoils and one adjacent reference area were selected from around the Xikuangshan mine in southern China. The association of AMF molecular diversity and community composition with the rhizosphere soils of the dominant plant species was studied by Polymerase Chain Reaction-Denaturing Gradient Gel Electrophoresis (PCR-DGGE). Results from all five studied sites showed that the diversity of AMF decreased with increasing Sb concentration. Principal component analysis (PCA) indicated that the AMF community structure was markedly different among these groups. Further redundancy analysis (RDA) showed that Sb contamination was the dominating factor influencing the AMF community structure in the Sb mine area. However, the multivariate analysis showed that, apart from the soil Sb content, extractable nitrogen content and organic matter content also attributed to AMF sequence distribution type. Some AMF sequences were only found in the highly contaminated area and these might be ideal candidates for improving phytoremediation efficiency in Sb mining regions. Gene sequencing analysis revealed that most species were affiliated with Glomus, suggesting that Glomus was the dominant AMF genus in the studied Sb mining area.     

Insights on the solubilization products after combined alkaline and ultrasonic pre-treatment of sewage sludge

This work provides insights on the solubilization products after a simultaneous combination of alkaline and ultrasonic (ALK + ULS) pre-treatment of sewage sludge. Soluble chemical oxygen demand (SCOD) increased from 1200 to 11,000 mg/L after such treatment. Organics with molecular weight around 5.6 kDa were solubilized because of the synergistic effect of ultrasound and alkali. Organics with molecular weight larger than 300 kDa increased from 7.8% to 60%, 16% and 42.3% after ULS, ALK and ALK + ULS treatment, respectively. Excitation emission matrix fluorescence spectroscopy analysis identified soluble microbial product-like and humic acid-like matters as the main solubilization products. Sludge anaerobic biodegradability was significantly enhanced with the simultaneous application of ALK + ULS pre-treatment. ALK + ULS pre-treatment resulted in 37.8% biodegradability increase compared to the untreated sludge. This value was higher compared to the biodegradability increase induced by individual ALK pre-treatment (5.7%) or individual ULS pre-treatment (20.7%) under the same conditions applied.     

BDE-28对斑马鱼核受体介导的内分泌干扰效应研究

2,4,4’-三溴联苯醚(BDE-28)在环境中普遍存在,且在长江流域多种水生生物中检出。目前,国内外对高溴代PBDEs(如BDE-47、BDE-99等)的水生脊椎动物内分泌干扰效应报道较多,而BDE-28的有关研究则相对较少。将斑马鱼胚胎暴露于2、20和200μg·L~(-1)的BDE-28后,借助q-RT-PCR方法对幼鱼8个重要受体包括雄激素受体(AR)、甲状腺激素受体(TR)、芳香烃受体(AhR)、雌激素受体(ER)、糖皮质激素受体(GR)、孕烷X受体(PXR)、盐皮质激素受体(MR)和过氧化物酶体增殖物激活受体(PPAR)相关基因的转录水平进行了研究。结果表明,BDE-28暴露可导致AR、TR和Ah R的基因下调,其中核心受体AR和TR在低中高3种浓度下的下调倍数分别为3.03、2.64、10.10和2.21、2.18、2.31,芳香烃受体基因2(ahr2)在暴露于2和20μg·L~(-1)的BDE-28后,下调倍数分别为12.65和9.23,而雌激素受体(er1)基因在低中高浓度显著上调,上调倍数分别为12.29、12.67和15.87,雌激素受体(er2a)基因在2和20μg·L~(-1)BDE-28下的上调倍数分别为10.83和17.19。进一步采用分子对接和分子动力学模拟的方法研究BDE-28与AR、TR、Ah R和ER之间的相互作用。结果显示,BDE-28与这些受体通过疏水和氢键等相互作用稳定结合,动力学模拟后骨架原子的均方根偏差(RMSD)在5 ns后较稳定。由此可知,BDE-28通过AR、TR、Ah R和ER受体介导产生内分泌干扰效应。