The Role of Hybrid Vigor in the Replacement of Pecos Pupfish by Its Hybrids with Sheepshead Minnow

Abstract:  Many species are jeopardized by hybridization and genetic introgression with closely related species. Unfortunately, the mechanisms that promote or retard gene flow between divergent populations are little studied and poorly understood. Like many imperiled fish species, the Pecos pupfish ( Cyprinodon pecosensis ) is threatened with replacement by its hybrids with a close congener. We examined swimming performance and growth rate of hybrid pupfish to determine the role of hybrid vigor in the genetic homogenization of C. pecosensis by its hybrids with sheepshead minnow ( C. variegatus ). The F1 hybrids, backcross hybrids, and purebred C. variegatus displayed greater swimming endurance than purebred C. pecosensis . In addition, F1 hybrids and C. variegatus grew more rapidly than C. pecosensis . The ecological superiority of hybrids probably promoted their rapid spread through and beyond the historic range of C. pecosensis . These results indicate that eradication of hybrids and restoration of C. pecosensis to its native range is unlikely. Extinction of unique species via genetic homogenization can result from human activities that increase gene flow between historically fragmented populations; conservation managers must weigh the potential for such a catastrophe against the presumed benefits of increased interpopulation gene flow. This example illustrates how, after hybridization has occurred, conflict may arise between formerly complementary conservation goals.     

A Concentric Analysis of the Impact of Urbanization on the Threatened European Tree Frog in an Agricultural Landscape

Abstract:  Pond-breeding amphibians are affected by site-specific factors and regional and landscape-scale patterns of land use. Recent anthropogenic landscape modifications (drainage, agriculture intensification, larger road networks, and increased traffic) affect species by reducing the suitable habitat area and fragmenting remaining populations. Using a robust concentric approach based on permutation tests, we evaluated the impact of recent landscape changes on the presence of the endangered European tree frog ( Hyla arborea ) in wetlands. We analyzed the frequency of 1 traffic and 14 land-use indices at 20 circular ranges (from 100-m up to 2-km radii) around 76 ponds identified in western Switzerland. Urban areas and road surfaces had a strong adverse effect on tree frog presence even at relatively great distances (from 100 m up to 1 km). When traffic measurements were considered instead of road surfaces, the effect increased, suggesting a negative impact due to a vehicle-induced effect. Altogether, our results indicate that urbanization and traffic must be taken into account when pond creation is an option in conservation management plans, as is the case for the European tree frog in western Switzerland. We conclude that our easy-to-use and robust concentric method of analysis can successfully assist managers in identifying potential sites for pond creation, where probability of the presence of tree frogs is maximized.     

Written Accounts of an Amazonian Landscape Over the Last 450 Years

Abstract:  Books, articles, government documents, and other written accounts of tropical biology and conservation reach a tiny fraction of their potential audience. Some texts are inaccessible because of the language in which they are written. Others are only available to subscribers of developed-world journals, or distributed narrowly within tropical countries. To examine this dysfunction in the tropical literature—and what it means for conservation—we tried to compile everything ever written on the biology and conservation of the department of Madre de Dios, Peru, in southwestern Amazonia. Our search of libraries, databases, and existing bibliographies uncovered 2,202 texts totaling roughly 80,000 pages. Texts date from 1553 to 2004, but 93% were written after 1970. Since that year the publication rate has increased steadily from fewer than 10 texts/year to nearly 3 texts/week in 2004. Roughly half of the Madre de Dios bibliography is in Spanish-language texts written by Peruvian authors and mostly inaccessible outside Peru. Most of the remaining material is English-language texts written by foreign authors and largely inaccessible in Peru. Foreign authors tended to write about ecological studies with limited relevance to on-the-ground conservation challenges, whereas Peruvian authors were more likely to make specific management recommendations. The establishment of a Web-based digital library for Neotropical nature would help make the tropical literature a more efficient resource for science and conservation. Additional recommendations include investing in syntheses, translations, popular summaries, and peer-reviewed journals in tropical countries, providing incentives for management-relevant research in tropical protected areas, and reinforcing training of scientific reading and writing in tropical universities.     

Impacts of Livestock Grazing and Tree Clearing on Birds of Woodland and Riparian Habitats

Abstract:  We investigated the impact of pastoral management on birds in subtropical grassy eucalypt woodland in southeastern Queensland, Australia, where the patterns of land management have made it possible to disentangle the effects of livestock grazing from those of tree clearing. We recorded changes in bird species composition, density, and relative abundance across two woodland habitat types (riparian and nonriparian) and two levels of clearing (wooded and nonwooded) and three levels of livestock grazing (low, moderate, and high) replicated over space (1000 km²) and time (2001–2002). We predicted that species that depend on understory vegetation would be most negatively affected by livestock grazing. A Bayesian generalized linear model showed that the level of grazing had the greatest effect when trees were present. When trees were absent, the impact of grazing was overshadowed by the effects of a lack of trees. Over 65% of species responded to different levels of grazing, and the abundance of 42% of species varied markedly with habitat and grazing. The most common response to grazing was high species relative abundance under low levels of grazing (28% of species), species absence at high levels of grazing (20%), and an increase in abundance with increasing grazing (18%). Despite having similar bird assemblages, the effect of grazing was stronger in riparian habitat than in adjacent woodland habitat. Our results suggest that any level of commercial livestock grazing is detrimental to some woodland birds, particularly the understory-dependant species, as predicted. Nevertheless, provided trees are not cleared, a rich and abundant bird fauna can coexist with moderate levels of grazing. Habitats with high levels of grazing, on the other hand, resulted in a species-poor bird assemblage dominated by birds that are increasing in abundance nationally .     

Conservation of the Marbled Murrelet under the Northwest Forest Plan

Abstract:  The Marbled Murrelet ( Brachyramphus marmoratus ) was listed as threatened in 1992, primarily because of loss of its old-forest nesting habitat. Monitoring conducted over the first 10 years following implementation of the Northwest Forest Plan shows at-sea murrelet populations appear to be stationary, but recruitment is very low and demographic models project a 4–6% annual rate of decline. Monitoring of nesting habitat indicated there were about 1.6 million ha of higher-suitability nesting habitat on all lands at the start of the plan, about half of which occurred on federal lands. Most (88%) of higher-suitability habitat on federal lands was protected within reserves. Over the past 10 years, losses of habitat due primarily to fire have totaled about 2% on federal lands. Losses have been much greater (12%) on nonfederal lands, due primarily to timber harvest. Habitat is expected to accrue within reserves as younger forest matures and attains sufficient diameter to support nesting sites. At-sea estimates of population size are strongly and positively correlated with amounts of adjacent nesting habitat at a broad scale, supporting the idea that amounts of nesting habitat are a primary driver in wide-scale murrelet population distribution. Conditions at sea, however, such as temperature regimes, prey availability, and pollutants, continue to affect murrelet populations. The system of large reserves seems to have achieved the short-term objective of conserving much of the remaining nesting habitat on federal lands. These reserves are also likely to contribute to the long-term objective of creating large, contiguous blocks of nesting habitat. The plan has a primary role in conserving and restoring nesting habitat on federal land but will succeed in this role only if land allocations calling for such protection are in place for many decades.     

Collaborating to Conserve Large Mammals in Southeast Asia

Abstract:  Depressed mammal densities characterize the interior of many Southeast Asian protected areas, and are the result of commercial and subsistence hunting. Local people are part of this problem but can participate in solutions through improved partnerships that incorporate local knowledge into problem diagnosis. The process of involving local people helps build a constituency that is more aware of its role (positive and negative) in a protected area and generates site-specific conservation assessments for management planning. We illustrate the practical details of initiating such a partnership through our work in a Thai wildlife sanctuary. Many protected areas in Southeast Asia present similar opportunities. In local workshops, village woodsmen were led through ranking exercises to develop a spatially explicit picture of 20-year trends in the abundance of 31 mammal species and to compare species-specific causes for declines. Within five taxonomic groups, leaf monkeys (primates), porcupines (rodents), tigers (large carnivores), civets (small carnivores), and elephants (ungulates) had declined most severely (37–74%). Commercial hunting contributed heavily to extensive population declines for most species, and subsistence hunting was locally significant for some small carnivores, leaf monkeys, and deer. Workshops thus clarified which species were at highest risk of local extinction, where the most threatened populations were, and causes for these patterns. Most important, they advanced a shared problem definition, thereby unlocking opportunities for collaboration. As a result, local people and sanctuary managers have increased communication, initiated joint monitoring and patrolling, and established wildlife recovery zones. Using local knowledge has limitations, but the process of engaging local people promotes collaborative action that large mammals in Southeast Asia need.     

Deforestation and Plant Diversity of Madagascar's Littoral Forests

Abstract:  Few studies have attempted to quantify the reduction or document the floristic composition of forests in Madagascar. Thus, we focused specifically on deforestation and plant diversity in Madagascar's eastern littoral community. We used a data set of approximately 13,500 specimen records compiled from both historical and contemporary collections resulting from recent intensive inventory efforts to enumerate total plant species richness and to analyze the degree of endemism within littoral forests. Change in littoral forest cover from original to current extent was estimated using geographical information systems tools, remote sensing data (satellite imagery and low-elevation digital photography), and environmental data layers. Of the original littoral forest only 10.3% remains in the form of small forest parcels, and only 1.5% of these remaining fragments are included within the existing protected-areas network. Additionally, approximately 13% of Madagascar's total native flora has been recorded from these forests that originally occupied <1% of its total land surface, and over 25% of the 1535 plant species known from littoral forests are endemic to this community. Given the ongoing pressure from human settlement along Madagascar's eastern coast, protection of the remaining forest fragments is critical for their survival. Fifteen of the largest intact littoral forest fragments we identified, collectively representing 41.5% of remaining littoral forest, are among priority sites recommended to the government of Madagascar for plant conservation and incorporation into the protected-areas network.     

Use of Traditional Ecological Knowledge in Marine Conservation

Abstract:  Traditional ecological knowledge (TEK) represents multiple bodies of knowledge accumulated through many generations of close interactions between people and the natural world. TEK and its application via customary ecological management plans can be useful in modern conservation programs. I disaggregate the term TEK into its constituent parts and show several ways in which TEK can strengthen research designs by increasing locality-specific knowledge, including environmental linkages occurring in those localities. Examples of the uses of TEK in conservation include folk taxonomy in systematics in Micronesia, species knowledge for conservation in Kiribati, and fishers' knowledge of ecological interactions for reserve design in Belize. When conservationists recognize the utility of TEK, they can engage in an equitable exchange of knowledge and foster shared responsibility with indigenous people. These types of exchanges can also provide an opportunity for indigenous people to develop a scientific infrastructure.     

Patterns of Genetic Diversity and Its Loss in Mammalian Populations

Abstract:  Policy aimed at conserving biodiversity has focused on species diversity. Loss of genetic diversity, however, can affect population persistence, evolutionary potential, and individual fitness. Although mammals are a well-studied taxonomic group, a comprehensive assessment of mammalian genetic diversity based on modern molecular markers is lacking. We examined published microsatellite data from populations of 108 mammalian species to evaluate background patterns of genetic variability across taxa and body masses. We tested for loss of genetic diversity at the population level by asking whether populations that experienced demographic threats exhibited lower levels of genetic diversity. We also evaluated the effect of ascertainment bias (a reduction in variability when microsatellite primers are transferred across species) on our assessment of genetic diversity. Heterozygosity did not vary with body mass across species ranging in size from shrews to whales. Differences across taxonomic groupings were noted at the highest level, between populations of marsupial and placental mammals. We documented consistently lower heterozygosity, however, in populations that had experienced demographic threats across a wide range of mammalian species. We also documented a significant ( p = 0.01) reduction in heterozygosity as a result of ascertainment bias. Our results suggest that populations of both rare and common mammals are currently losing genetic diversity and that conservation efforts focused above the population level may fail to protect the breadth of persisting genetic diversity. Conservation policy makers may need to focus their efforts below the species level to stem further losses of genetic resources.