Random binary matrices in biogeographical ecology—Instituting a good neighbor policy

Binary matrices originating from presence/absence data on species (rows) distributed over sites (columns) have been a subject of much controversy in ecological biogeography. Under the null hypothesis that every matrix is equally likely, the distributions of some test statistics measuring co-occurrences between species are sought, conditional on the row and column totals being fixed at the values observed for some particular matrix. Many ad hoc methods have been proposed in the literature, but at least some of them do not provide uniform random samples of matrices. In particular, some swap algorithms have not accounted for the number of neighbors each matrix has in the universe of matrices with a set of fixed row and column sums. We provide a Monte-Carlo method using random walks on graphs that gives correct estimates for the distributions of statistics. We exemplify its use with one statistic.     

山西云顶山亚高山草甸优势种群和群落的格局分析

应用DCA排序与双项轨迹方差法相结合的方法,对云顶山亚高山草甸优势种群和群落的分布格局进行了分析.结果表明,群落格局与其优势种的格局关系密切,披针苔草 车前群系、披针苔草 蒲公英群系和嵩草 车前群系的格局差异明显,种群和群落的分布格局不仅受种的生物学特性影响,还受环境因子制约.图4表1参19     

林丹烟剂对毛竹林冠与林下层节肢动物共有种及其多样性的影响

共有种反映毗邻生境节肢动物群落的相互作用程度及其潜在互作途径的多样性.通过对施用林丹烟剂后毛竹林冠层与林下层节肢动物的系统定位调查,分析和比较了林丹烟剂干扰下两个林层的节肢动物共有种及其多样性.结果表明,以未防治和白僵菌防治为对照,施用林丹烟剂显著减少了林冠和林下层的共有种及其个体数,降低了两个林层中共有种的多样性;在物种方面主要表现为蜘蛛目、膜翅目、鞘翅目、双翅目和鳞翅目共有种减少;在个体方面,林下层主要表现为蜘蛛目、膜翅目、鞘翅目和双翅目共有种个体减少,林冠层主要表现为蜘蛛目、鞘翅目和双翅目共有种个体减少.但无论在物种还是个体方面,林丹烟剂对捕食性共有种的影响均最大.进一步的灰色关联分析表明,引起共有种多样性下降的主要原因在于共有物种的减少.因此认为,林丹烟剂干扰削弱了林下和林冠层节肢动物之间的相互作用,不利于林下生境促进林冠层生物多样性和增强群落对叶部害虫自然控制作用等生态功能的发挥.图1表6参22     

新邵县工矿破坏土地的生态重建模式探索

对新邵县现有的因工程建设、矿产开发而形成的破坏土地进行调查、分类.根据不同的类型采取不同的工程、林学措施,试图重建以木本植物为主的生态群落结构.     

Are Modern Biological Invasions an Unprecedented Form of Global Change?

Abstract:  The uniqueness of the current, global mass invasion by nonindigenous species has been challenged recently by researchers who argue that modern rates and consequences of nonindigenous species establishment are comparable to episodes in the geological past. Although there is a fossil record of species invasions occurring in waves after geographic barriers had been lifted, such episodic events differ markedly from human-assisted invasions in spatial and temporal scales and in the number and diversity of organisms involved in long-distance dispersal. Today, every region of the planet is simultaneously affected and modern rates of invasion are several orders of magnitude higher than prehistoric rates. In terms of its rate and geographical extent, its potential for synergistic disruption and the scope of its evolutionary consequences, the current mass invasion event is without precedent and should be regarded as a unique form of global change. Prehistoric examples of biotic interchanges are nonetheless instructive and can increase our understanding of species-area effects, evolutionary effects, biotic resistance to invasion, and the impacts of novel functional groups introduced to naïve biotas. Nevertheless, they provide only limited insight into the synergistic effects of invasions and other environmental stressors, the effect of frequent introductions of large numbers of propagules, and global homogenization, all of which characterize the current mass invasion event .     

Effects of Earthworm Invasion on Plant Species Richness in Northern Hardwood Forests

Abstract:  The invasion of non-native earthworms ( Lumbricus spp.) into a small number of intensively studied stands of northern hardwood forest has been linked to declines in plant diversity and the local extirpation of one threatened species. It is unknown, however, whether these changes have occurred across larger regions of hardwood forests, which plant species are most vulnerable, or with which earthworm species such changes are associated most closely. To address these issues we conducted a regional survey in the Chippewa and Chequamegon national forests in Minnesota and Wisconsin (U.S.A.), respectively. We sampled earthworms, soils, and vegetation, examined deer browse in 20 mature, sugar-maple-dominated forest stands in each national forest, and analyzed the relationship between invasive earthworms and vascular plant species richness and composition. Invasion by Lumbricus was a strong indicator of reduced plant richness in both national forests. The mass of Lumbricus juveniles was significantly and negatively related to plant-species richness in both forests. In addition, Lumbricus was a significant factor affecting plant richness in a full model that included multiple variables. In the Chequamegon National Forest earthworm mass was associated with higher sedge cover and lower cover of sugar maple seedlings and several forb species. The trends were similar but not as pronounced in Chippewa, perhaps due to lower deer densities and different earthworm species composition. Our results provide regional evidence that invasion by Lumbricus species may be an important mechanism in reduced plant-species richness and changes in plant communities in mature forests dominated by sugar maples.     

Disturbance-Mediated Mammal Persistence and Abundance-Area Relationships in Amazonian Forest Fragments

Abstract:  Few researchers have investigated the synergistic effects of tropical forest fragmentation and disturbance on species persistence and abundance. We examined effects of both forest-patch metrics and forest disturbance in determining richness and abundance of midsized to large-bodied mammal species in a highly fragmented Amazonian forest landscape. Twenty-one forest fragments, ranging from 2 to 14,480 ha, and two continuous forest sites were sampled based on sightings, tracks, line-transect censuses, armadillo burrow censuses, and camera trapping. Patch occupancy of 37 species recorded ranged from 4% to all forest sites surveyed. Forest fragment size was the strongest predictor of species persistence, explaining 90% of the variation in species richness. Information-theoretic analysis confirmed that fragment area was the most important explanatory variable for the overall species richness and abundance of mammal species, followed by surface fires, which affected the abundance of seven species. Large mammal species were typically absent from fragments <100 ha, whereas some ubiquitous species were favored by fragmentation, exhibiting hyperabundance in small patches. Our findings highlight the importance of large (>10,000 ha), relatively undisturbed forest patches to maximize persistence and maintain baseline abundances of Neotropical forest mammal species.     

Modelling Ecological Presence–absence Data along an Environmental Gradient: Threshold Levels of the Environment

A methodology for estimating environmental thresholds of binary presence–absence data is presented where the level of the threshold is parameterised. Presence–absence data is fitted to three complementary different models: an independent null-model, a monotonically increasing or decreasing model, and an optimum model. The range of the three models is strictly between zero and one and the models are therefore well suited for modelling presence probabilities. The results of the three models may be combined by using Bayesian model selection methodologies. The proposed methodology is exemplified on observed binary presence–absence data of Bauera rubioides along an elevation gradient. Received: May 2005 / Revised: July 2005 An erratum to this article is available at.     

Assessing the Risk of Introducing Exotic Species via the Live Marine Species Trade

Abstract:  Although the shipping industry has received considerable attention as a dispersal mechanism for aquatic nuisance species, many invasions have been linked to other mechanisms of transfer. The threat posed to coastal ecosystems by these alternative mechanisms, however, remains largely unquantified. We assessed the potential risks of introducing marine and estuarine species associated with seven mechanisms of transfer: seafood companies, aquaculture operations, bait shops, stores that sell marine ornamental species, research and educational organizations, public aquariums, and coastal restoration projects. For each, we compiled a comprehensive database of organizations in coastal Massachusetts. We then designed and administered a survey to a subset of organizations that inquired about (1) their proximity to saltwater and methods of handling live imports; (2) the type and quantity of marine species being imported; and (3) the organization's familiarity with marine invasions. Respondents in five of the seven categories acknowledged importing nonlocal live marine species to the area. Seafood companies handled the majority of individuals but relatively few taxa. This mechanism of transfer also had the most complex trade patterns and the greatest number of operations located near saltwater. In contrast, the other transfer mechanisms each had simpler trade pathways and fewer operations but varied in the quantity and taxonomic diversity of their imports. Significantly, no single mechanism of transfer stood out as presenting a primary risk. Rather, each had characteristics or used handling practices at different points in the importation process that could facilitate introductions. To prevent future marine invasions, better reporting requirements for live species imports are needed, and best-management practices and outreach strategies specific to the transfer mechanism should be developed and implemented.